RNA–Protein interactions for RNA: ENST00000460331.5

ZNF3-211, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-211ENST00000460331 PIP4K2BP78356 416 aa16.99■□□□□ 0.31
ZNF3-211ENST00000460331 SCAF1Q9H7N4 1312 aaKnown RBP16.98■□□□□ 0.31
ZNF3-211ENST00000460331 AMER1Q5JTC6 1135 aaPredicted RBP16.98■□□□□ 0.31
ZNF3-211ENST00000460331 SSH2Q76I76 1423 aa16.97■□□□□ 0.31
ZNF3-211ENST00000460331 FYB1O15117 783 aa16.97■□□□□ 0.31
ZNF3-211ENST00000460331 RALBP1Q15311 655 aa16.96■□□□□ 0.31
ZNF3-211ENST00000460331 CC2D1BQ5T0F9 858 aaKnown RBP16.96■□□□□ 0.31
ZNF3-211ENST00000460331 SBNO1A3KN83 1393 aa16.96■□□□□ 0.31
ZNF3-211ENST00000460331 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.3
ZNF3-211ENST00000460331 ROBO1Q9Y6N7 1651 aa16.95■□□□□ 0.3
ZNF3-211ENST00000460331 XPCQ01831 940 aaPredicted RBP16.95■□□□□ 0.3
ZNF3-211ENST00000460331 CNGB1Q14028 1251 aaPredicted RBP16.95■□□□□ 0.3
ZNF3-211ENST00000460331 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
ZNF3-211ENST00000460331 ABTB2Q8N961 1025 aa16.95■□□□□ 0.3
ZNF3-211ENST00000460331 COG3Q96JB2 828 aa16.95■□□□□ 0.3
ZNF3-211ENST00000460331 NLRP13Q86W25 1043 aa16.94■□□□□ 0.3
ZNF3-211ENST00000460331 DDX17Q92841 729 aaKnown RBP16.94■□□□□ 0.3
ZNF3-211ENST00000460331 GGNBP2Q9H3C7 697 aa16.94■□□□□ 0.3
ZNF3-211ENST00000460331 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
ZNF3-211ENST00000460331 NLRP6P59044 892 aa16.93■□□□□ 0.3
ZNF3-211ENST00000460331 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
ZNF3-211ENST00000460331 NME9Q86XW9 330 aa16.93■□□□□ 0.3
ZNF3-211ENST00000460331 PRKRIP1Q9H875 184 aaPredicted RBP16.93■□□□□ 0.3
ZNF3-211ENST00000460331 PXDNQ92626 1479 aa16.93■□□□□ 0.3
ZNF3-211ENST00000460331 NHSL1Q5SYE7 1610 aa16.92■□□□□ 0.3
ZNF3-211ENST00000460331 USP31Q70CQ4 1352 aa16.92■□□□□ 0.3
ZNF3-211ENST00000460331 LRRC59Q96AG4 307 aaKnown RBP16.92■□□□□ 0.3
ZNF3-211ENST00000460331 SPATA31A3Q5VYP0 1347 aa16.92■□□□□ 0.3
ZNF3-211ENST00000460331 ARHGEF10O15013 1369 aa16.91■□□□□ 0.3
ZNF3-211ENST00000460331 AHDC1Q5TGY3 1603 aaPredicted RBP16.91■□□□□ 0.3
ZNF3-211ENST00000460331 KIF20BQ96Q89 1820 aa16.91■□□□□ 0.3
ZNF3-211ENST00000460331 TNS3Q68CZ2 1445 aa16.9■□□□□ 0.3
ZNF3-211ENST00000460331 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.3
ZNF3-211ENST00000460331 TRPM3Q9HCF6 1732 aaPredicted RBP16.89■□□□□ 0.29
ZNF3-211ENST00000460331 KCNH5Q8NCM2 988 aa16.88■□□□□ 0.29
ZNF3-211ENST00000460331 NUTM2GQ5VZR2 741 aa16.87■□□□□ 0.29
ZNF3-211ENST00000460331 ZRANB1Q9UGI0 708 aa16.87■□□□□ 0.29
ZNF3-211ENST00000460331 MYBBP1AQ9BQG0 1328 aaKnown RBP16.87■□□□□ 0.29
ZNF3-211ENST00000460331 ANKRD26Q9UPS8 1709 aa16.87■□□□□ 0.29
ZNF3-211ENST00000460331 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
ZNF3-211ENST00000460331 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
ZNF3-211ENST00000460331 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
ZNF3-211ENST00000460331 PHLPP1O60346 1717 aa16.85■□□□□ 0.29
ZNF3-211ENST00000460331 ALS2Q96Q42 1657 aa16.85■□□□□ 0.29
ZNF3-211ENST00000460331 TNNT2P45379 298 aaPredicted RBP16.84■□□□□ 0.29
ZNF3-211ENST00000460331 MIER1Q8N108 512 aa16.84■□□□□ 0.29
ZNF3-211ENST00000460331 AATKQ6ZMQ8 1374 aa16.84■□□□□ 0.29
ZNF3-211ENST00000460331 USP19O94966 1318 aa16.83■□□□□ 0.28
ZNF3-211ENST00000460331 PPP2R1AP30153 589 aa16.83■□□□□ 0.28
ZNF3-211ENST00000460331 USP54Q70EL1 1684 aa16.83■□□□□ 0.28
ZNF3-211ENST00000460331 GCP02774 474 aa16.82■□□□□ 0.28
ZNF3-211ENST00000460331 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
ZNF3-211ENST00000460331 CCER2I3L3R5 266 aa16.81■□□□□ 0.28
ZNF3-211ENST00000460331 COL16A1Q07092 1604 aaPredicted RBP16.81■□□□□ 0.28
ZNF3-211ENST00000460331 SOX12O15370 315 aa16.8■□□□□ 0.28
ZNF3-211ENST00000460331 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
ZNF3-211ENST00000460331 PLEKHG5O94827 1062 aa16.79■□□□□ 0.28
ZNF3-211ENST00000460331 MED1Q15648 1581 aaPredicted RBP16.79■□□□□ 0.28
ZNF3-211ENST00000460331 SLIT3O75094 1523 aa16.79■□□□□ 0.28
ZNF3-211ENST00000460331 PNPLA6Q8IY17 1366 aa16.78■□□□□ 0.28
ZNF3-211ENST00000460331 JCADQ9P266 1359 aa16.78■□□□□ 0.28
ZNF3-211ENST00000460331 MTHFSP49914 203 aa16.78■□□□□ 0.28
ZNF3-211ENST00000460331 FBXO41Q8TF61 875 aa16.78■□□□□ 0.28
ZNF3-211ENST00000460331 POLKQ9UBT6 870 aa16.78■□□□□ 0.28
ZNF3-211ENST00000460331 HSPA1LP34931 641 aa16.77■□□□□ 0.28
ZNF3-211ENST00000460331 AMPHP49418 695 aa16.77■□□□□ 0.28
ZNF3-211ENST00000460331 CABLES1Q8TDN4 633 aa16.77■□□□□ 0.28
ZNF3-211ENST00000460331 KIF24Q5T7B8 1368 aa16.77■□□□□ 0.27
ZNF3-211ENST00000460331 PPM1GO15355 546 aaPredicted RBP16.76■□□□□ 0.27
ZNF3-211ENST00000460331 RRS1Q15050 365 aaKnown RBP16.76■□□□□ 0.27
ZNF3-211ENST00000460331 MARF1Q9Y4F3 1742 aaKnown RBP16.76■□□□□ 0.27
ZNF3-211ENST00000460331 FBLN1P23142 703 aa16.75■□□□□ 0.27
ZNF3-211ENST00000460331 MRS2Q9HD23 443 aa16.75■□□□□ 0.27
ZNF3-211ENST00000460331 COL22A1Q8NFW1 1626 aaPredicted RBP16.74■□□□□ 0.27
ZNF3-211ENST00000460331 MAP3K19Q56UN5 1328 aa16.74■□□□□ 0.27
ZNF3-211ENST00000460331 ZBTB7CA1YPR0 619 aa16.74■□□□□ 0.27
ZNF3-211ENST00000460331 ZC3H6P61129 1189 aaKnown RBP16.74■□□□□ 0.27
ZNF3-211ENST00000460331 ARHGEF25Q86VW2 580 aa16.74■□□□□ 0.27
ZNF3-211ENST00000460331 EMILIN1Q9Y6C2 1016 aa16.74■□□□□ 0.27
ZNF3-211ENST00000460331 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
ZNF3-211ENST00000460331 SPATA31A6Q5VVP1 1343 aa16.73■□□□□ 0.27
ZNF3-211ENST00000460331 MAP2P11137 1827 aaKnown RBP16.73■□□□□ 0.27
ZNF3-211ENST00000460331 SMG6Q86US8 1419 aaKnown RBP16.73■□□□□ 0.27
ZNF3-211ENST00000460331 NFAT5O94916 1531 aa16.73■□□□□ 0.27
ZNF3-211ENST00000460331 RTL1A6NKG5 1358 aa16.73■□□□□ 0.27
ZNF3-211ENST00000460331 CPDO75976 1380 aa16.73■□□□□ 0.27
ZNF3-211ENST00000460331 IP6K1Q92551 441 aa16.72■□□□□ 0.27
ZNF3-211ENST00000460331 FLT4P35916 1363 aa16.72■□□□□ 0.27
ZNF3-211ENST00000460331 SHPRHQ149N8 1683 aa16.72■□□□□ 0.27
ZNF3-211ENST00000460331 CRYBG1Q9Y4K1 1723 aa16.71■□□□□ 0.27
ZNF3-211ENST00000460331 PRDM11Q9NQV5 511 aa16.71■□□□□ 0.27
ZNF3-211ENST00000460331 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
ZNF3-211ENST00000460331 INSRP06213 1382 aa16.71■□□□□ 0.27
ZNF3-211ENST00000460331 CDK12Q9NYV4 1490 aaPredicted RBP16.71■□□□□ 0.27
ZNF3-211ENST00000460331 HOXC9P31274 260 aa16.7■□□□□ 0.26
ZNF3-211ENST00000460331 KIAA0232Q92628 1395 aa16.69■□□□□ 0.26
ZNF3-211ENST00000460331 NUTM2BA6NNL0 878 aaPredicted RBP16.69■□□□□ 0.26
ZNF3-211ENST00000460331 NUTM2EB1AL46 878 aaPredicted RBP16.69■□□□□ 0.26
ZNF3-211ENST00000460331 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
ZNF3-211ENST00000460331 NUTM2AQ8IVF1 878 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms