RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SSH1Q8WYL5 1049 aa19.48■□□□□ 0.71
LMNB1-203ENST00000460265 SLKQ9H2G2 1235 aaPredicted RBP19.48■□□□□ 0.71
LMNB1-203ENST00000460265 APBB1O00213 710 aa19.48■□□□□ 0.71
LMNB1-203ENST00000460265 LMOD2Q6P5Q4 547 aa19.48■□□□□ 0.71
LMNB1-203ENST00000460265 DCTN1Q14203 1278 aa19.48■□□□□ 0.71
LMNB1-203ENST00000460265 LTV1Q96GA3 475 aaPredicted RBP19.48■□□□□ 0.71
LMNB1-203ENST00000460265 EID1Q9Y6B2 187 aa19.48■□□□□ 0.71
LMNB1-203ENST00000460265 IPO8O15397 1037 aaKnown RBP19.47■□□□□ 0.71
LMNB1-203ENST00000460265 HSP90AA1P07900 732 aaKnown RBP19.47■□□□□ 0.71
LMNB1-203ENST00000460265 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.47■□□□□ 0.71
LMNB1-203ENST00000460265 ABCC3O15438 1527 aa19.47■□□□□ 0.71
LMNB1-203ENST00000460265 PCDHB15Q9Y5E8 787 aa19.46■□□□□ 0.71
LMNB1-203ENST00000460265 NEO1Q92859 1461 aa19.46■□□□□ 0.71
LMNB1-203ENST00000460265 HECW2Q9P2P5 1572 aa19.46■□□□□ 0.71
LMNB1-203ENST00000460265 TSPOAP1O95153 1857 aa19.46■□□□□ 0.71
LMNB1-203ENST00000460265 SBNO2Q9Y2G9 1366 aa19.46■□□□□ 0.71
LMNB1-203ENST00000460265 YTHDC2Q9H6S0 1430 aaKnown RBP19.45■□□□□ 0.7
LMNB1-203ENST00000460265 PDZRN3Q9UPQ7 1066 aa19.45■□□□□ 0.7
LMNB1-203ENST00000460265 CCDC61Q9Y6R9 512 aa19.45■□□□□ 0.7
LMNB1-203ENST00000460265 WASLO00401 505 aaPredicted RBP19.45■□□□□ 0.7
LMNB1-203ENST00000460265 TRMT2AQ8IZ69 625 aaKnown RBP19.44■□□□□ 0.7
LMNB1-203ENST00000460265 RBM33Q96EV2 1170 aaKnown RBP19.44■□□□□ 0.7
LMNB1-203ENST00000460265 LAMC1P11047 1609 aa19.43■□□□□ 0.7
LMNB1-203ENST00000460265 MFAP1P55081 439 aaKnown RBP19.43■□□□□ 0.7
LMNB1-203ENST00000460265 C1orf115Q9H7X2 142 aa19.43■□□□□ 0.7
LMNB1-203ENST00000460265 POLKQ9UBT6 870 aa19.43■□□□□ 0.7
LMNB1-203ENST00000460265 PHACTR3Q96KR7 559 aa19.42■□□□□ 0.7
LMNB1-203ENST00000460265 RRAGDQ9NQL2 400 aaPredicted RBP19.42■□□□□ 0.7
LMNB1-203ENST00000460265 FAM83GA6ND36 823 aa19.41■□□□□ 0.7
LMNB1-203ENST00000460265 SULT6B1Q6IMI4 303 aa19.41■□□□□ 0.7
LMNB1-203ENST00000460265 IQGAP1P46940 1657 aa19.41■□□□□ 0.7
LMNB1-203ENST00000460265 MVPQ14764 893 aaKnown RBP19.41■□□□□ 0.7
LMNB1-203ENST00000460265 TRIM27P14373 513 aa19.4■□□□□ 0.7
LMNB1-203ENST00000460265 AMPHP49418 695 aa19.4■□□□□ 0.7
LMNB1-203ENST00000460265 LNPKQ9C0E8 428 aa19.4■□□□□ 0.7
LMNB1-203ENST00000460265 KDM2BQ8NHM5 1336 aa19.4■□□□□ 0.7
LMNB1-203ENST00000460265 FCHSD2O94868 740 aa19.39■□□□□ 0.7
LMNB1-203ENST00000460265 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.7
LMNB1-203ENST00000460265 TMEM57Q8N5G2 664 aa19.39■□□□□ 0.7
LMNB1-203ENST00000460265 INSRP06213 1382 aa19.39■□□□□ 0.7
LMNB1-203ENST00000460265 RIMS2Q9UQ26 1411 aa19.39■□□□□ 0.69
LMNB1-203ENST00000460265 DDX19BQ9UMR2 479 aa19.39■□□□□ 0.69
LMNB1-203ENST00000460265 MROH1Q8NDA8 1641 aa19.39■□□□□ 0.69
LMNB1-203ENST00000460265 BECN1Q14457 450 aa19.39■□□□□ 0.69
LMNB1-203ENST00000460265 TRIM35Q9UPQ4 493 aa19.38■□□□□ 0.69
LMNB1-203ENST00000460265 VWDEQ8N2E2 1590 aa19.37■□□□□ 0.69
LMNB1-203ENST00000460265 DEPDC5O75140 1603 aa19.37■□□□□ 0.69
LMNB1-203ENST00000460265 ANKRD45Q5TZF3 282 aa19.37■□□□□ 0.69
LMNB1-203ENST00000460265 ZMYM3Q14202 1370 aa19.37■□□□□ 0.69
LMNB1-203ENST00000460265 ADGRB3O60242 1522 aa19.37■□□□□ 0.69
LMNB1-203ENST00000460265 MROH2AA6NES4 1674 aa19.37■□□□□ 0.69
LMNB1-203ENST00000460265 NECTIN2Q92692 538 aa19.37■□□□□ 0.69
LMNB1-203ENST00000460265 RRP9O43818 475 aaKnown RBP19.36■□□□□ 0.69
LMNB1-203ENST00000460265 CALD1Q05682 793 aaKnown RBP19.36■□□□□ 0.69
LMNB1-203ENST00000460265 C8orf34Q49A92 452 aa19.36■□□□□ 0.69
LMNB1-203ENST00000460265 RTF1Q92541 710 aaKnown RBP19.36■□□□□ 0.69
LMNB1-203ENST00000460265 PUS7Q96PZ0 661 aaKnown RBP19.36■□□□□ 0.69
LMNB1-203ENST00000460265 NSD2O96028 1365 aa19.36■□□□□ 0.69
LMNB1-203ENST00000460265 SLC4A10Q6U841 1118 aa19.35■□□□□ 0.69
LMNB1-203ENST00000460265 MIS18AQ9NYP9 233 aa19.35■□□□□ 0.69
LMNB1-203ENST00000460265 SEC24BO95487 1268 aa19.34■□□□□ 0.69
LMNB1-203ENST00000460265 FRMPD1Q5SYB0 1578 aa19.34■□□□□ 0.69
LMNB1-203ENST00000460265 GNAI1P63096 354 aa19.33■□□□□ 0.69
LMNB1-203ENST00000460265 NFE2L2Q16236 605 aa19.33■□□□□ 0.69
LMNB1-203ENST00000460265 TWISTNBQ3B726 338 aaPredicted RBP19.33■□□□□ 0.68
LMNB1-203ENST00000460265 AEBP1Q8IUX7 1158 aa19.33■□□□□ 0.68
LMNB1-203ENST00000460265 CCDC27Q2M243 656 aa19.33■□□□□ 0.68
LMNB1-203ENST00000460265 MCM10Q7L590 875 aa19.33■□□□□ 0.68
LMNB1-203ENST00000460265 ABCC11Q96J66 1382 aa19.32■□□□□ 0.68
LMNB1-203ENST00000460265 NLRP6P59044 892 aa19.32■□□□□ 0.68
LMNB1-203ENST00000460265 L1TD1Q5T7N2 865 aaKnown RBP19.32■□□□□ 0.68
LMNB1-203ENST00000460265 TSPYL6Q8N831 410 aa19.32■□□□□ 0.68
LMNB1-203ENST00000460265 CFAP74Q9C0B2 1584 aa19.32■□□□□ 0.68
LMNB1-203ENST00000460265 LMTK2Q8IWU2 1503 aa19.31■□□□□ 0.68
LMNB1-203ENST00000460265 KIF16BQ96L93 1317 aa19.31■□□□□ 0.68
LMNB1-203ENST00000460265 AMOTL2Q9Y2J4 779 aa19.31■□□□□ 0.68
LMNB1-203ENST00000460265 METP08581 1390 aa19.31■□□□□ 0.68
LMNB1-203ENST00000460265 HSP90AB2PQ58FF8 381 aa19.31■□□□□ 0.68
LMNB1-203ENST00000460265 PPIP5K1Q6PFW1 1433 aa19.31■□□□□ 0.68
LMNB1-203ENST00000460265 LMOD3Q0VAK6 560 aa19.3■□□□□ 0.68
LMNB1-203ENST00000460265 ZNF692Q9BU19 519 aaPredicted RBP19.3■□□□□ 0.68
LMNB1-203ENST00000460265 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
LMNB1-203ENST00000460265 ACEP12821 1306 aa19.29■□□□□ 0.68
LMNB1-203ENST00000460265 GLI2P10070 1586 aa19.29■□□□□ 0.68
LMNB1-203ENST00000460265 PLEKHF1Q96S99 279 aa19.29■□□□□ 0.68
LMNB1-203ENST00000460265 DIP2CQ9Y2E4 1556 aa19.29■□□□□ 0.68
LMNB1-203ENST00000460265 A0A0U1RQG5 324 aaPredicted RBP19.28■□□□□ 0.68
LMNB1-203ENST00000460265 QRICH2Q9H0J4 1663 aa19.28■□□□□ 0.68
LMNB1-203ENST00000460265 LTKP29376 864 aa19.28■□□□□ 0.68
LMNB1-203ENST00000460265 KRT24Q2M2I5 525 aa19.28■□□□□ 0.68
LMNB1-203ENST00000460265 NINLQ9Y2I6 1382 aa19.28■□□□□ 0.68
LMNB1-203ENST00000460265 TNRQ92752 1358 aa19.27■□□□□ 0.68
LMNB1-203ENST00000460265 MBIPQ9NS73 344 aa19.26■□□□□ 0.67
LMNB1-203ENST00000460265 ADGRB1O14514 1584 aa19.26■□□□□ 0.67
LMNB1-203ENST00000460265 TULP4Q9NRJ4 1543 aa19.26■□□□□ 0.67
LMNB1-203ENST00000460265 NRXN1Q9ULB1 1477 aa19.26■□□□□ 0.67
LMNB1-203ENST00000460265 ARHGAP31Q2M1Z3 1444 aa19.25■□□□□ 0.67
LMNB1-203ENST00000460265 CAMSAP1Q5T5Y3 1602 aa19.24■□□□□ 0.67
LMNB1-203ENST00000460265 C8orf58Q8NAV2 365 aa19.24■□□□□ 0.67
LMNB1-203ENST00000460265 FOXD4L1Q9NU39 408 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms