RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 MYOM1P52179 1685 aa16.81■□□□□ 0.28
HDAC4-206ENST00000460235 ROBO1Q9Y6N7 1651 aa16.81■□□□□ 0.28
HDAC4-206ENST00000460235 CD163L1Q9NR16 1453 aa16.8■□□□□ 0.28
HDAC4-206ENST00000460235 LMOD2Q6P5Q4 547 aa16.8■□□□□ 0.28
HDAC4-206ENST00000460235 COG3Q96JB2 828 aa16.8■□□□□ 0.28
HDAC4-206ENST00000460235 CARD14Q9BXL6 1004 aa16.8■□□□□ 0.28
HDAC4-206ENST00000460235 AHDC1Q5TGY3 1603 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-206ENST00000460235 PER1O15534 1290 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-206ENST00000460235 FBXO41Q8TF61 875 aa16.79■□□□□ 0.28
HDAC4-206ENST00000460235 AKAP12Q02952 1782 aa16.79■□□□□ 0.28
HDAC4-206ENST00000460235 SPATA31A3Q5VYP0 1347 aa16.78■□□□□ 0.28
HDAC4-206ENST00000460235 NLRP6P59044 892 aa16.78■□□□□ 0.28
HDAC4-206ENST00000460235 ANP32CO43423 234 aa16.77■□□□□ 0.28
HDAC4-206ENST00000460235 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.28
HDAC4-206ENST00000460235 KCNH5Q8NCM2 988 aa16.77■□□□□ 0.28
HDAC4-206ENST00000460235 TNS3Q68CZ2 1445 aa16.77■□□□□ 0.27
HDAC4-206ENST00000460235 SSH2Q76I76 1423 aa16.77■□□□□ 0.27
HDAC4-206ENST00000460235 MON2Q7Z3U7 1717 aa16.76■□□□□ 0.27
HDAC4-206ENST00000460235 PXDNQ92626 1479 aa16.76■□□□□ 0.27
HDAC4-206ENST00000460235 FYB1O15117 783 aa16.76■□□□□ 0.27
HDAC4-206ENST00000460235 RALBP1Q15311 655 aa16.76■□□□□ 0.27
HDAC4-206ENST00000460235 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
HDAC4-206ENST00000460235 NHSL1Q5SYE7 1610 aa16.76■□□□□ 0.27
HDAC4-206ENST00000460235 HAP1P54257 671 aaPredicted RBP16.75■□□□□ 0.27
HDAC4-206ENST00000460235 DIEXFQ68CQ4 756 aaKnown RBP16.75■□□□□ 0.27
HDAC4-206ENST00000460235 USP31Q70CQ4 1352 aa16.75■□□□□ 0.27
HDAC4-206ENST00000460235 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
HDAC4-206ENST00000460235 DDX17Q92841 729 aaKnown RBP16.74■□□□□ 0.27
HDAC4-206ENST00000460235 NME9Q86XW9 330 aa16.73■□□□□ 0.27
HDAC4-206ENST00000460235 CC2D1BQ5T0F9 858 aaKnown RBP16.72■□□□□ 0.27
HDAC4-206ENST00000460235 GGNBP2Q9H3C7 697 aa16.72■□□□□ 0.27
HDAC4-206ENST00000460235 PHLPP1O60346 1717 aa16.72■□□□□ 0.27
HDAC4-206ENST00000460235 JCADQ9P266 1359 aa16.72■□□□□ 0.27
HDAC4-206ENST00000460235 NRKQ7Z2Y5 1582 aa16.69■□□□□ 0.26
HDAC4-206ENST00000460235 SPATA31A6Q5VVP1 1343 aa16.69■□□□□ 0.26
HDAC4-206ENST00000460235 TRPM3Q9HCF6 1732 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-206ENST00000460235 HSPA1LP34931 641 aa16.68■□□□□ 0.26
HDAC4-206ENST00000460235 GCP02774 474 aa16.67■□□□□ 0.26
HDAC4-206ENST00000460235 NUTM2GQ5VZR2 741 aa16.67■□□□□ 0.26
HDAC4-206ENST00000460235 USP19O94966 1318 aa16.67■□□□□ 0.26
HDAC4-206ENST00000460235 AATKQ6ZMQ8 1374 aa16.66■□□□□ 0.26
HDAC4-206ENST00000460235 PNPLA6Q8IY17 1366 aa16.66■□□□□ 0.26
HDAC4-206ENST00000460235 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
HDAC4-206ENST00000460235 OVOS2A0A0J9YW53 1432 aa16.66■□□□□ 0.26
HDAC4-206ENST00000460235 OVOS2Q6IE36 1432 aa16.66■□□□□ 0.26
HDAC4-206ENST00000460235 PRKRIP1Q9H875 184 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-206ENST00000460235 COL16A1Q07092 1604 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-206ENST00000460235 ALS2Q96Q42 1657 aa16.65■□□□□ 0.26
HDAC4-206ENST00000460235 CNGB1Q14028 1251 aaPredicted RBP16.65■□□□□ 0.26
HDAC4-206ENST00000460235 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
HDAC4-206ENST00000460235 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.26
HDAC4-206ENST00000460235 MYBBP1AQ9BQG0 1328 aaKnown RBP16.64■□□□□ 0.25
HDAC4-206ENST00000460235 MED1Q15648 1581 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-206ENST00000460235 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.25
HDAC4-206ENST00000460235 PIK3C2AO00443 1686 aa16.63■□□□□ 0.25
HDAC4-206ENST00000460235 TNNT2P45379 298 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-206ENST00000460235 AMPHP49418 695 aa16.62■□□□□ 0.25
HDAC4-206ENST00000460235 USP54Q70EL1 1684 aa16.62■□□□□ 0.25
HDAC4-206ENST00000460235 ANKRD26Q9UPS8 1709 aa16.62■□□□□ 0.25
HDAC4-206ENST00000460235 PRDM11Q9NQV5 511 aa16.61■□□□□ 0.25
HDAC4-206ENST00000460235 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
HDAC4-206ENST00000460235 SLIT3O75094 1523 aa16.6■□□□□ 0.25
HDAC4-206ENST00000460235 SOX12O15370 315 aa16.6■□□□□ 0.25
HDAC4-206ENST00000460235 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
HDAC4-206ENST00000460235 CPDO75976 1380 aa16.6■□□□□ 0.25
HDAC4-206ENST00000460235 COL22A1Q8NFW1 1626 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-206ENST00000460235 SHPRHQ149N8 1683 aa16.59■□□□□ 0.25
HDAC4-206ENST00000460235 PPP2R1AP30153 589 aa16.59■□□□□ 0.25
HDAC4-206ENST00000460235 ARHGEF25Q86VW2 580 aa16.59■□□□□ 0.25
HDAC4-206ENST00000460235 CABLES1Q8TDN4 633 aa16.59■□□□□ 0.25
HDAC4-206ENST00000460235 RTL1A6NKG5 1358 aa16.59■□□□□ 0.25
HDAC4-206ENST00000460235 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-206ENST00000460235 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-206ENST00000460235 PPM1GO15355 546 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-206ENST00000460235 ZC3H6P61129 1189 aaKnown RBP16.58■□□□□ 0.24
HDAC4-206ENST00000460235 MEX3CQ5U5Q3 659 aaKnown RBP16.58■□□□□ 0.24
HDAC4-206ENST00000460235 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-206ENST00000460235 FLT4P35916 1363 aa16.57■□□□□ 0.24
HDAC4-206ENST00000460235 MTHFSP49914 203 aa16.57■□□□□ 0.24
HDAC4-206ENST00000460235 POLKQ9UBT6 870 aa16.57■□□□□ 0.24
HDAC4-206ENST00000460235 NUDCQ9Y266 331 aa16.57■□□□□ 0.24
HDAC4-206ENST00000460235 ZBTB7CA1YPR0 619 aa16.56■□□□□ 0.24
HDAC4-206ENST00000460235 IP6K1Q92551 441 aa16.56■□□□□ 0.24
HDAC4-206ENST00000460235 SMG6Q86US8 1419 aaKnown RBP16.55■□□□□ 0.24
HDAC4-206ENST00000460235 MAP3K19Q56UN5 1328 aa16.55■□□□□ 0.24
HDAC4-206ENST00000460235 CCER2I3L3R5 266 aa16.55■□□□□ 0.24
HDAC4-206ENST00000460235 RRS1Q15050 365 aaKnown RBP16.55■□□□□ 0.24
HDAC4-206ENST00000460235 ABCC6O95255 1503 aa16.55■□□□□ 0.24
HDAC4-206ENST00000460235 BLMP54132 1417 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-206ENST00000460235 KIAA0232Q92628 1395 aa16.54■□□□□ 0.24
HDAC4-206ENST00000460235 ADAMTS2O95450 1211 aa16.54■□□□□ 0.24
HDAC4-206ENST00000460235 EVA1CP58658 441 aa16.53■□□□□ 0.24
HDAC4-206ENST00000460235 NGLY1Q96IV0 654 aa16.53■□□□□ 0.24
HDAC4-206ENST00000460235 NFAT5O94916 1531 aa16.53■□□□□ 0.24
HDAC4-206ENST00000460235 INSRP06213 1382 aa16.52■□□□□ 0.24
HDAC4-206ENST00000460235 PHRF1Q9P1Y6 1649 aaKnown RBP16.52■□□□□ 0.24
HDAC4-206ENST00000460235 DIAPH1O60610 1272 aaKnown RBP16.52■□□□□ 0.24
HDAC4-206ENST00000460235 HOXC9P31274 260 aa16.52■□□□□ 0.24
HDAC4-206ENST00000460235 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
HDAC4-206ENST00000460235 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms