RNA–Protein interactions for RNA: ENST00000460177.1

LCNL1-203, Transcript of lipocalin like 1, humanhuman

TSL 1 (best)

Gene LCNL1, Length 1,704 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-203ENST00000460177 GTF3C3Q9Y5Q9 886 aa29.84■■■□□ 2.37
LCNL1-203ENST00000460177 COL3A1P02461 1466 aaPredicted RBP29.84■■■□□ 2.37
LCNL1-203ENST00000460177 TTC21BQ7Z4L5 1316 aa29.83■■■□□ 2.37
LCNL1-203ENST00000460177 PMFBP1Q8TBY8 1022 aa29.82■■■□□ 2.36
LCNL1-203ENST00000460177 MAP2P11137 1827 aaKnown RBP29.82■■■□□ 2.36
LCNL1-203ENST00000460177 CFAP53Q96M91 514 aa29.81■■■□□ 2.36
LCNL1-203ENST00000460177 SENP3-EIF4A1A0A087X0R7 540 aa29.8■■■□□ 2.36
LCNL1-203ENST00000460177 PROSER2Q86WR7 435 aaPredicted RBP29.79■■■□□ 2.36
LCNL1-203ENST00000460177 ZRANB1Q9UGI0 708 aa29.79■■■□□ 2.36
LCNL1-203ENST00000460177 OVOS2A0A0J9YW53 1432 aa29.79■■■□□ 2.36
LCNL1-203ENST00000460177 OVOS2Q6IE36 1432 aa29.79■■■□□ 2.36
LCNL1-203ENST00000460177 PIK3C2AO00443 1686 aa29.77■■■□□ 2.36
LCNL1-203ENST00000460177 SMG6Q86US8 1419 aaKnown RBP29.77■■■□□ 2.36
LCNL1-203ENST00000460177 C14orf37Q86TY3 774 aa29.77■■■□□ 2.36
LCNL1-203ENST00000460177 NGDNQ8NEJ9 315 aaKnown RBP29.77■■■□□ 2.36
LCNL1-203ENST00000460177 COG3Q96JB2 828 aa29.76■■■□□ 2.35
LCNL1-203ENST00000460177 AATKQ6ZMQ8 1374 aa29.75■■■□□ 2.35
LCNL1-203ENST00000460177 TTC21AQ8NDW8 1320 aa29.75■■■□□ 2.35
LCNL1-203ENST00000460177 USP54Q70EL1 1684 aa29.75■■■□□ 2.35
LCNL1-203ENST00000460177 PNPLA6Q8IY17 1366 aa29.73■■■□□ 2.35
LCNL1-203ENST00000460177 XIRP1Q702N8 1843 aaKnown RBP29.73■■■□□ 2.35
LCNL1-203ENST00000460177 NCOA3Q9Y6Q9 1424 aa29.73■■■□□ 2.35
LCNL1-203ENST00000460177 DMRT2Q9Y5R5 561 aa29.72■■■□□ 2.35
LCNL1-203ENST00000460177 TMEM94Q12767 1356 aa29.72■■■□□ 2.35
LCNL1-203ENST00000460177 MARF1Q9Y4F3 1742 aaKnown RBP29.71■■■□□ 2.35
LCNL1-203ENST00000460177 PHF8Q9UPP1 1060 aa29.71■■■□□ 2.35
LCNL1-203ENST00000460177 ZNF335Q9H4Z2 1342 aaPredicted RBP29.71■■■□□ 2.35
LCNL1-203ENST00000460177 CDK12Q9NYV4 1490 aaPredicted RBP29.7■■■□□ 2.35
LCNL1-203ENST00000460177 POLKQ9UBT6 870 aa29.7■■■□□ 2.34
LCNL1-203ENST00000460177 KIF1AQ12756 1690 aa29.69■■■□□ 2.34
LCNL1-203ENST00000460177 DCCP43146 1447 aa29.69■■■□□ 2.34
LCNL1-203ENST00000460177 FBLN1P23142 703 aa29.68■■■□□ 2.34
LCNL1-203ENST00000460177 CCDC146Q8IYE0 955 aa29.68■■■□□ 2.34
LCNL1-203ENST00000460177 USP31Q70CQ4 1352 aa29.67■■■□□ 2.34
LCNL1-203ENST00000460177 SALL2Q9Y467 1007 aaPredicted RBP29.67■■■□□ 2.34
LCNL1-203ENST00000460177 LRRC7Q96NW7 1537 aa29.66■■■□□ 2.34
LCNL1-203ENST00000460177 C19orf44Q9H6X5 657 aa29.66■■■□□ 2.34
LCNL1-203ENST00000460177 IQSEC2Q5JU85 1478 aa29.65■■■□□ 2.34
LCNL1-203ENST00000460177 C1orf167Q5SNV9 1468 aa29.65■■■□□ 2.34
LCNL1-203ENST00000460177 EMILIN1Q9Y6C2 1016 aa29.64■■■□□ 2.34
LCNL1-203ENST00000460177 ESCO1Q5FWF5 840 aa29.63■■■□□ 2.33
LCNL1-203ENST00000460177 NUDCQ9Y266 331 aa29.63■■■□□ 2.33
LCNL1-203ENST00000460177 MST1RQ04912 1400 aa29.62■■■□□ 2.33
LCNL1-203ENST00000460177 PEAK1Q9H792 1746 aa29.62■■■□□ 2.33
LCNL1-203ENST00000460177 PDE3BQ13370 1112 aa29.6■■■□□ 2.33
LCNL1-203ENST00000460177 DIAPH1O60610 1272 aaKnown RBP29.59■■■□□ 2.33
LCNL1-203ENST00000460177 TRPM3Q9HCF6 1732 aaPredicted RBP29.59■■■□□ 2.33
LCNL1-203ENST00000460177 RRS1Q15050 365 aaKnown RBP29.59■■■□□ 2.33
LCNL1-203ENST00000460177 APAF1O14727 1248 aa29.58■■■□□ 2.33
LCNL1-203ENST00000460177 U2AF1L5P0DN76 240 aaPredicted RBP29.58■■■□□ 2.33
LCNL1-203ENST00000460177 U2AF1Q01081 240 aaKnown RBP eCLIP29.58■■■□□ 2.33
LCNL1-203ENST00000460177 ORAI2Q96SN7 254 aa29.58■■■□□ 2.33
LCNL1-203ENST00000460177 ZNF521Q96K83 1311 aa29.57■■■□□ 2.32
LCNL1-203ENST00000460177 PPM1GO15355 546 aaPredicted RBP29.57■■■□□ 2.32
LCNL1-203ENST00000460177 RUNDC1Q96C34 613 aa29.57■■■□□ 2.32
LCNL1-203ENST00000460177 U2SURPO15042 1029 aaKnown RBP29.55■■■□□ 2.32
LCNL1-203ENST00000460177 ATF3P18847 181 aa29.54■■■□□ 2.32
LCNL1-203ENST00000460177 MSH6P52701 1360 aa29.54■■■□□ 2.32
LCNL1-203ENST00000460177 NGEFQ8N5V2 710 aa29.52■■■□□ 2.32
LCNL1-203ENST00000460177 PAK3O75914 559 aaPredicted RBP29.51■■■□□ 2.32
LCNL1-203ENST00000460177 NLRP6P59044 892 aa29.51■■■□□ 2.32
LCNL1-203ENST00000460177 PSME1Q06323 249 aa29.51■■■□□ 2.31
LCNL1-203ENST00000460177 CDCA7LQ96GN5 454 aa29.51■■■□□ 2.31
LCNL1-203ENST00000460177 SUPT16HQ9Y5B9 1047 aaKnown RBP29.51■■■□□ 2.31
LCNL1-203ENST00000460177 IL13P35225 146 aa29.49■■■□□ 2.31
LCNL1-203ENST00000460177 CADPS2Q86UW7 1296 aa29.49■■■□□ 2.31
LCNL1-203ENST00000460177 ABTB2Q8N961 1025 aa29.49■■■□□ 2.31
LCNL1-203ENST00000460177 LTBP4Q8N2S1 1624 aa29.47■■■□□ 2.31
LCNL1-203ENST00000460177 FOXO3O43524 673 aa29.47■■■□□ 2.31
LCNL1-203ENST00000460177 NUTM2GQ5VZR2 741 aa29.47■■■□□ 2.31
LCNL1-203ENST00000460177 TCP11L2Q8N4U5 519 aa29.47■■■□□ 2.31
LCNL1-203ENST00000460177 PLEKHF1Q96S99 279 aa29.47■■■□□ 2.31
LCNL1-203ENST00000460177 RGPD1P0DJD0 1748 aa29.47■■■□□ 2.31
LCNL1-203ENST00000460177 SOX12O15370 315 aa29.46■■■□□ 2.31
LCNL1-203ENST00000460177 MAP3K19Q56UN5 1328 aa29.46■■■□□ 2.31
LCNL1-203ENST00000460177 ALS2Q96Q42 1657 aa29.46■■■□□ 2.31
LCNL1-203ENST00000460177 LTN1O94822 1766 aa29.46■■■□□ 2.31
LCNL1-203ENST00000460177 NFAT5O94916 1531 aa29.45■■■□□ 2.31
LCNL1-203ENST00000460177 SBNO1A3KN83 1393 aa29.45■■■□□ 2.31
LCNL1-203ENST00000460177 NEFLP07196 543 aa29.43■■■□□ 2.3
LCNL1-203ENST00000460177 FLT4P35916 1363 aa29.43■■■□□ 2.3
LCNL1-203ENST00000460177 GOLGA2Q08379 1002 aa29.42■■■□□ 2.3
LCNL1-203ENST00000460177 SLIT3O75094 1523 aa29.42■■■□□ 2.3
LCNL1-203ENST00000460177 XPCQ01831 940 aaPredicted RBP29.42■■■□□ 2.3
LCNL1-203ENST00000460177 RSPH6AQ9H0K4 717 aa29.42■■■□□ 2.3
LCNL1-203ENST00000460177 RRP7AQ9Y3A4 280 aaKnown RBP29.42■■■□□ 2.3
LCNL1-203ENST00000460177 NCBP3Q53F19 620 aaKnown RBP29.41■■■□□ 2.3
LCNL1-203ENST00000460177 PHF23Q9BUL5 403 aaPredicted RBP29.41■■■□□ 2.3
LCNL1-203ENST00000460177 FCHSD2O94868 740 aa29.4■■■□□ 2.3
LCNL1-203ENST00000460177 KIF24Q5T7B8 1368 aa29.4■■■□□ 2.3
LCNL1-203ENST00000460177 EIF4A2Q14240 407 aaKnown RBP29.4■■■□□ 2.3
LCNL1-203ENST00000460177 KRT28Q7Z3Y7 464 aa29.4■■■□□ 2.3
LCNL1-203ENST00000460177 PNNQ9H307 717 aaKnown RBP29.4■■■□□ 2.3
LCNL1-203ENST00000460177 MAPK8IP3Q9UPT6 1336 aa29.39■■■□□ 2.3
LCNL1-203ENST00000460177 FKBP8Q14318 412 aa29.39■■■□□ 2.3
LCNL1-203ENST00000460177 WWC1Q8IX03 1113 aa29.39■■■□□ 2.3
LCNL1-203ENST00000460177 PHRF1Q9P1Y6 1649 aaKnown RBP29.39■■■□□ 2.29
LCNL1-203ENST00000460177 CCDC27Q2M243 656 aa29.38■■■□□ 2.29
LCNL1-203ENST00000460177 HSP90AB2PQ58FF8 381 aa29.37■■■□□ 2.29
LCNL1-203ENST00000460177 SLFN5Q08AF3 891 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms