RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 PSME1Q06323 249 aa20.95■□□□□ 0.94
CMTM3-203ENST00000460097 PHLPP1O60346 1717 aa20.94■□□□□ 0.94
CMTM3-203ENST00000460097 CABP1Q9NZU7 370 aa20.94■□□□□ 0.94
CMTM3-203ENST00000460097 SOS2Q07890 1332 aaPredicted RBP20.94■□□□□ 0.94
CMTM3-203ENST00000460097 ATAD2Q6PL18 1390 aa20.93■□□□□ 0.94
CMTM3-203ENST00000460097 LRRC59Q96AG4 307 aaKnown RBP20.93■□□□□ 0.94
CMTM3-203ENST00000460097 KIF1AQ12756 1690 aa20.93■□□□□ 0.94
CMTM3-203ENST00000460097 NHSL1Q5SYE7 1610 aa20.93■□□□□ 0.94
CMTM3-203ENST00000460097 PPIP5K1Q6PFW1 1433 aa20.93■□□□□ 0.94
CMTM3-203ENST00000460097 XPCQ01831 940 aaPredicted RBP20.92■□□□□ 0.94
CMTM3-203ENST00000460097 CDCA8Q53HL2 280 aa20.92■□□□□ 0.94
CMTM3-203ENST00000460097 KRT28Q7Z3Y7 464 aa20.92■□□□□ 0.94
CMTM3-203ENST00000460097 ACEP12821 1306 aa20.91■□□□□ 0.94
CMTM3-203ENST00000460097 DISP3Q9P2K9 1392 aa20.91■□□□□ 0.94
CMTM3-203ENST00000460097 ITSN1Q15811 1721 aa20.91■□□□□ 0.94
CMTM3-203ENST00000460097 TMC1Q8TDI8 760 aa20.89■□□□□ 0.93
CMTM3-203ENST00000460097 KTN1Q86UP2 1357 aaKnown RBP20.89■□□□□ 0.93
CMTM3-203ENST00000460097 COL16A1Q07092 1604 aaPredicted RBP20.89■□□□□ 0.93
CMTM3-203ENST00000460097 POLR3AO14802 1390 aaPredicted RBP20.88■□□□□ 0.93
CMTM3-203ENST00000460097 TOPAZ1Q8N9V7 1692 aa20.88■□□□□ 0.93
CMTM3-203ENST00000460097 PAK3O75914 559 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-203ENST00000460097 PXDNQ92626 1479 aa20.87■□□□□ 0.93
CMTM3-203ENST00000460097 JCADQ9P266 1359 aa20.87■□□□□ 0.93
CMTM3-203ENST00000460097 CCDC136Q96JN2 1154 aa20.87■□□□□ 0.93
CMTM3-203ENST00000460097 SLC12A5Q9H2X9 1139 aa20.86■□□□□ 0.93
CMTM3-203ENST00000460097 ZNF692Q9BU19 519 aaPredicted RBP20.85■□□□□ 0.93
CMTM3-203ENST00000460097 USP35Q9P2H5 1018 aa20.85■□□□□ 0.93
CMTM3-203ENST00000460097 ZBTB47Q9UFB7 747 aaPredicted RBP20.85■□□□□ 0.93
CMTM3-203ENST00000460097 RTL5Q5HYW3 569 aaPredicted RBP20.84■□□□□ 0.93
CMTM3-203ENST00000460097 SBNO1A3KN83 1393 aa20.83■□□□□ 0.93
CMTM3-203ENST00000460097 SPATA31A3Q5VYP0 1347 aa20.83■□□□□ 0.93
CMTM3-203ENST00000460097 NINLQ9Y2I6 1382 aa20.82■□□□□ 0.92
CMTM3-203ENST00000460097 LMOD2Q6P5Q4 547 aa20.82■□□□□ 0.92
CMTM3-203ENST00000460097 POLR3GLQ9BT43 218 aa20.82■□□□□ 0.92
CMTM3-203ENST00000460097 HDGFL2Q7Z4V5 671 aaPredicted RBP20.81■□□□□ 0.92
CMTM3-203ENST00000460097 TERF2IPQ9NYB0 399 aa20.8■□□□□ 0.92
CMTM3-203ENST00000460097 TCERG1O14776 1098 aaKnown RBP20.8■□□□□ 0.92
CMTM3-203ENST00000460097 PNPLA6Q8IY17 1366 aa20.79■□□□□ 0.92
CMTM3-203ENST00000460097 CPSF1Q10570 1443 aaKnown RBP20.79■□□□□ 0.92
CMTM3-203ENST00000460097 PNISRQ8TF01 805 aaKnown RBP20.79■□□□□ 0.92
CMTM3-203ENST00000460097 TNS3Q68CZ2 1445 aa20.78■□□□□ 0.92
CMTM3-203ENST00000460097 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
CMTM3-203ENST00000460097 BRD4O60885 1362 aaPredicted RBP20.78■□□□□ 0.92
CMTM3-203ENST00000460097 MS4A1P11836 297 aa20.78■□□□□ 0.92
CMTM3-203ENST00000460097 USP6P35125 1406 aa20.78■□□□□ 0.92
CMTM3-203ENST00000460097 ARHGEF10O15013 1369 aa20.77■□□□□ 0.92
CMTM3-203ENST00000460097 INSRP06213 1382 aa20.76■□□□□ 0.91
CMTM3-203ENST00000460097 SHPRHQ149N8 1683 aa20.76■□□□□ 0.91
CMTM3-203ENST00000460097 CD163L1Q9NR16 1453 aa20.76■□□□□ 0.91
CMTM3-203ENST00000460097 NBR1Q14596 966 aa20.75■□□□□ 0.91
CMTM3-203ENST00000460097 ABTB2Q8N961 1025 aa20.75■□□□□ 0.91
CMTM3-203ENST00000460097 TRPM3Q9HCF6 1732 aaPredicted RBP20.75■□□□□ 0.91
CMTM3-203ENST00000460097 NUTM2BA6NNL0 878 aaPredicted RBP20.74■□□□□ 0.91
CMTM3-203ENST00000460097 NUTM2EB1AL46 878 aaPredicted RBP20.74■□□□□ 0.91
CMTM3-203ENST00000460097 NUTM2AQ8IVF1 878 aaPredicted RBP20.74■□□□□ 0.91
CMTM3-203ENST00000460097 A0A1W2PP64 1363 aa20.74■□□□□ 0.91
CMTM3-203ENST00000460097 TTC21BQ7Z4L5 1316 aa20.74■□□□□ 0.91
CMTM3-203ENST00000460097 ANKRD36BQ8N2N9 1353 aa20.73■□□□□ 0.91
CMTM3-203ENST00000460097 SSH2Q76I76 1423 aa20.73■□□□□ 0.91
CMTM3-203ENST00000460097 AKAP12Q02952 1782 aa20.72■□□□□ 0.91
CMTM3-203ENST00000460097 PLEKHG5O94827 1062 aa20.72■□□□□ 0.91
CMTM3-203ENST00000460097 PDE3BQ13370 1112 aa20.71■□□□□ 0.91
CMTM3-203ENST00000460097 NUTM2GQ5VZR2 741 aa20.71■□□□□ 0.91
CMTM3-203ENST00000460097 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.71■□□□□ 0.91
CMTM3-203ENST00000460097 TTC21AQ8NDW8 1320 aa20.71■□□□□ 0.91
CMTM3-203ENST00000460097 CABLES1Q8TDN4 633 aa20.7■□□□□ 0.9
CMTM3-203ENST00000460097 ALS2Q96Q42 1657 aa20.7■□□□□ 0.9
CMTM3-203ENST00000460097 COL22A1Q8NFW1 1626 aaPredicted RBP20.7■□□□□ 0.9
CMTM3-203ENST00000460097 HAP1P54257 671 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-203ENST00000460097 RALBP1Q15311 655 aa20.69■□□□□ 0.9
CMTM3-203ENST00000460097 NLRP13Q86W25 1043 aa20.69■□□□□ 0.9
CMTM3-203ENST00000460097 EDC4Q6P2E9 1401 aaKnown RBP20.69■□□□□ 0.9
CMTM3-203ENST00000460097 NLRP6P59044 892 aa20.69■□□□□ 0.9
CMTM3-203ENST00000460097 MEX3CQ5U5Q3 659 aaKnown RBP20.68■□□□□ 0.9
CMTM3-203ENST00000460097 MON2Q7Z3U7 1717 aa20.67■□□□□ 0.9
CMTM3-203ENST00000460097 PPM1GO15355 546 aaPredicted RBP20.67■□□□□ 0.9
CMTM3-203ENST00000460097 RRP1P56182 461 aaKnown RBP20.67■□□□□ 0.9
CMTM3-203ENST00000460097 ADAMTS2O95450 1211 aa20.67■□□□□ 0.9
CMTM3-203ENST00000460097 MYOM1P52179 1685 aa20.66■□□□□ 0.9
CMTM3-203ENST00000460097 CARD14Q9BXL6 1004 aa20.66■□□□□ 0.9
CMTM3-203ENST00000460097 PANK3Q9H999 370 aa20.66■□□□□ 0.9
CMTM3-203ENST00000460097 LRP6O75581 1613 aa20.66■□□□□ 0.9
CMTM3-203ENST00000460097 MYBBP1AQ9BQG0 1328 aaKnown RBP20.65■□□□□ 0.9
CMTM3-203ENST00000460097 NME9Q86XW9 330 aa20.64■□□□□ 0.9
CMTM3-203ENST00000460097 NRKQ7Z2Y5 1582 aa20.64■□□□□ 0.89
CMTM3-203ENST00000460097 MED1Q15648 1581 aaPredicted RBP20.63■□□□□ 0.89
CMTM3-203ENST00000460097 BACH2Q9BYV9 841 aa20.63■□□□□ 0.89
CMTM3-203ENST00000460097 USP19O94966 1318 aa20.62■□□□□ 0.89
CMTM3-203ENST00000460097 ZRANB1Q9UGI0 708 aa20.62■□□□□ 0.89
CMTM3-203ENST00000460097 GCP02774 474 aa20.61■□□□□ 0.89
CMTM3-203ENST00000460097 C8orf37Q96NL8 207 aa20.61■□□□□ 0.89
CMTM3-203ENST00000460097 USP31Q70CQ4 1352 aa20.61■□□□□ 0.89
CMTM3-203ENST00000460097 PIK3C2AO00443 1686 aa20.61■□□□□ 0.89
CMTM3-203ENST00000460097 NSD3Q9BZ95 1437 aa20.6■□□□□ 0.89
CMTM3-203ENST00000460097 FYB1O15117 783 aa20.6■□□□□ 0.89
CMTM3-203ENST00000460097 PRKCSHP14314 528 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-203ENST00000460097 PDE4AP27815 886 aa20.6■□□□□ 0.89
CMTM3-203ENST00000460097 NGLY1Q96IV0 654 aa20.6■□□□□ 0.89
CMTM3-203ENST00000460097 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-203ENST00000460097 DDRGK1Q96HY6 314 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms