RNA–Protein interactions for RNA: ENST00000459873.1

PCCB-202, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-202ENST00000459873 ARHGEF10O15013 1369 aa12.83□□□□□ -0.36
PCCB-202ENST00000459873 ANKRD36BQ8N2N9 1353 aa12.83□□□□□ -0.36
PCCB-202ENST00000459873 EDC4Q6P2E9 1401 aaKnown RBP12.83□□□□□ -0.36
PCCB-202ENST00000459873 XPCQ01831 940 aaPredicted RBP12.83□□□□□ -0.36
PCCB-202ENST00000459873 SPATA31A3Q5VYP0 1347 aa12.83□□□□□ -0.36
PCCB-202ENST00000459873 PLCH1Q4KWH8 1693 aa12.83□□□□□ -0.36
PCCB-202ENST00000459873 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
PCCB-202ENST00000459873 NGDNQ8NEJ9 315 aaKnown RBP12.81□□□□□ -0.36
PCCB-202ENST00000459873 CABP1Q9NZU7 370 aa12.81□□□□□ -0.36
PCCB-202ENST00000459873 KTN1Q86UP2 1357 aaKnown RBP12.81□□□□□ -0.36
PCCB-202ENST00000459873 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
PCCB-202ENST00000459873 KIF7Q2M1P5 1343 aa12.8□□□□□ -0.36
PCCB-202ENST00000459873 CCDC7Q96M83 1385 aa12.8□□□□□ -0.36
PCCB-202ENST00000459873 OVOS2A0A0J9YW53 1432 aa12.79□□□□□ -0.36
PCCB-202ENST00000459873 OVOS2Q6IE36 1432 aa12.79□□□□□ -0.36
PCCB-202ENST00000459873 NRAPQ86VF7 1730 aa12.79□□□□□ -0.36
PCCB-202ENST00000459873 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.79□□□□□ -0.36
PCCB-202ENST00000459873 NFAT5O94916 1531 aa12.79□□□□□ -0.36
PCCB-202ENST00000459873 LRRC59Q96AG4 307 aaKnown RBP12.79□□□□□ -0.36
PCCB-202ENST00000459873 SPATA31A6Q5VVP1 1343 aa12.79□□□□□ -0.36
PCCB-202ENST00000459873 C11orf95C9JLR9 678 aaPredicted RBP12.78□□□□□ -0.36
PCCB-202ENST00000459873 NWD2Q9ULI1 1742 aa12.78□□□□□ -0.36
PCCB-202ENST00000459873 NSD3Q9BZ95 1437 aa12.78□□□□□ -0.36
PCCB-202ENST00000459873 LMO7Q8WWI1 1683 aa12.77□□□□□ -0.36
PCCB-202ENST00000459873 LTN1O94822 1766 aa12.77□□□□□ -0.36
PCCB-202ENST00000459873 COL14A1Q05707 1796 aaKnown RBP12.77□□□□□ -0.36
PCCB-202ENST00000459873 PSME1Q06323 249 aa12.77□□□□□ -0.37
PCCB-202ENST00000459873 SLC12A5Q9H2X9 1139 aa12.77□□□□□ -0.37
PCCB-202ENST00000459873 USP19O94966 1318 aa12.77□□□□□ -0.37
PCCB-202ENST00000459873 TMC1Q8TDI8 760 aa12.76□□□□□ -0.37
PCCB-202ENST00000459873 WASHC2AQ641Q2 1341 aa12.76□□□□□ -0.37
PCCB-202ENST00000459873 TTC21AQ8NDW8 1320 aa12.76□□□□□ -0.37
PCCB-202ENST00000459873 ABCC6O95255 1503 aa12.76□□□□□ -0.37
PCCB-202ENST00000459873 TTC21BQ7Z4L5 1316 aa12.75□□□□□ -0.37
PCCB-202ENST00000459873 HDGFL2Q7Z4V5 671 aaPredicted RBP12.75□□□□□ -0.37
PCCB-202ENST00000459873 TERF2IPQ9NYB0 399 aa12.75□□□□□ -0.37
PCCB-202ENST00000459873 USP31Q70CQ4 1352 aa12.74□□□□□ -0.37
PCCB-202ENST00000459873 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
PCCB-202ENST00000459873 COL18A1P39060 1754 aa12.73□□□□□ -0.37
PCCB-202ENST00000459873 PAK3O75914 559 aaPredicted RBP12.72□□□□□ -0.37
PCCB-202ENST00000459873 SLIT2O94813 1529 aa12.71□□□□□ -0.38
PCCB-202ENST00000459873 POLR3GLQ9BT43 218 aa12.7□□□□□ -0.38
PCCB-202ENST00000459873 CPDO75976 1380 aa12.69□□□□□ -0.38
PCCB-202ENST00000459873 WNK3Q9BYP7 1800 aa12.69□□□□□ -0.38
PCCB-202ENST00000459873 EP400Q96L91 3159 aa12.69□□□□□ -0.38
PCCB-202ENST00000459873 PEAK1Q9H792 1746 aa12.69□□□□□ -0.38
PCCB-202ENST00000459873 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
PCCB-202ENST00000459873 NME9Q86XW9 330 aa12.69□□□□□ -0.38
PCCB-202ENST00000459873 ABTB2Q8N961 1025 aa12.69□□□□□ -0.38
PCCB-202ENST00000459873 CARD14Q9BXL6 1004 aa12.69□□□□□ -0.38
PCCB-202ENST00000459873 FAM208AQ9UK61 1670 aaKnown RBP12.69□□□□□ -0.38
PCCB-202ENST00000459873 NSD2O96028 1365 aa12.69□□□□□ -0.38
PCCB-202ENST00000459873 CABLES1Q8TDN4 633 aa12.68□□□□□ -0.38
PCCB-202ENST00000459873 RGPD5Q99666 1765 aa12.67□□□□□ -0.38
PCCB-202ENST00000459873 NUTM2BA6NNL0 878 aaPredicted RBP12.67□□□□□ -0.38
PCCB-202ENST00000459873 NUTM2EB1AL46 878 aaPredicted RBP12.67□□□□□ -0.38
PCCB-202ENST00000459873 NUTM2GQ5VZR2 741 aa12.67□□□□□ -0.38
PCCB-202ENST00000459873 NUTM2AQ8IVF1 878 aaPredicted RBP12.67□□□□□ -0.38
PCCB-202ENST00000459873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCCB-202ENST00000459873 KIAA0232Q92628 1395 aa12.67□□□□□ -0.38
PCCB-202ENST00000459873 NLRP13Q86W25 1043 aa12.66□□□□□ -0.38
PCCB-202ENST00000459873 CAMTA1Q9Y6Y1 1673 aa12.66□□□□□ -0.38
PCCB-202ENST00000459873 SMG6Q86US8 1419 aaKnown RBP12.65□□□□□ -0.38
PCCB-202ENST00000459873 NLRP6P59044 892 aa12.65□□□□□ -0.38
PCCB-202ENST00000459873 PANK3Q9H999 370 aa12.65□□□□□ -0.38
PCCB-202ENST00000459873 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
PCCB-202ENST00000459873 COL5A2P05997 1499 aaPredicted RBP12.65□□□□□ -0.38
PCCB-202ENST00000459873 BCL9LQ86UU0 1499 aa12.65□□□□□ -0.38
PCCB-202ENST00000459873 GLI3P10071 1580 aa12.64□□□□□ -0.39
PCCB-202ENST00000459873 CGNL1Q0VF96 1302 aa12.64□□□□□ -0.39
PCCB-202ENST00000459873 ADAMTS2O95450 1211 aa12.64□□□□□ -0.39
PCCB-202ENST00000459873 ATRNO75882 1429 aa12.63□□□□□ -0.39
PCCB-202ENST00000459873 FYB1O15117 783 aa12.63□□□□□ -0.39
PCCB-202ENST00000459873 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
PCCB-202ENST00000459873 HAP1P54257 671 aaPredicted RBP12.63□□□□□ -0.39
PCCB-202ENST00000459873 MEX3CQ5U5Q3 659 aaKnown RBP12.63□□□□□ -0.39
PCCB-202ENST00000459873 RTL1A6NKG5 1358 aa12.63□□□□□ -0.39
PCCB-202ENST00000459873 NPC1L1Q9UHC9 1359 aa12.63□□□□□ -0.39
PCCB-202ENST00000459873 AFF2P51816 1311 aa12.62□□□□□ -0.39
PCCB-202ENST00000459873 THSD7AQ9UPZ6 1657 aa12.62□□□□□ -0.39
PCCB-202ENST00000459873 AATKQ6ZMQ8 1374 aa12.62□□□□□ -0.39
PCCB-202ENST00000459873 GCP02774 474 aa12.62□□□□□ -0.39
PCCB-202ENST00000459873 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
PCCB-202ENST00000459873 GGNBP2Q9H3C7 697 aa12.62□□□□□ -0.39
PCCB-202ENST00000459873 MAP2P11137 1827 aaKnown RBP12.61□□□□□ -0.39
PCCB-202ENST00000459873 AMER1Q5JTC6 1135 aaPredicted RBP12.61□□□□□ -0.39
PCCB-202ENST00000459873 FNBP4Q8N3X1 1017 aaPredicted RBP12.61□□□□□ -0.39
PCCB-202ENST00000459873 KCNH5Q8NCM2 988 aa12.61□□□□□ -0.39
PCCB-202ENST00000459873 COG3Q96JB2 828 aa12.61□□□□□ -0.39
PCCB-202ENST00000459873 BLMP54132 1417 aaPredicted RBP12.61□□□□□ -0.39
PCCB-202ENST00000459873 CDK12Q9NYV4 1490 aaPredicted RBP12.6□□□□□ -0.39
PCCB-202ENST00000459873 PER1O15534 1290 aaPredicted RBP12.6□□□□□ -0.39
PCCB-202ENST00000459873 PRDM11Q9NQV5 511 aa12.6□□□□□ -0.39
PCCB-202ENST00000459873 ZC3H6P61129 1189 aaKnown RBP12.59□□□□□ -0.39
PCCB-202ENST00000459873 ARHGEF25Q86VW2 580 aa12.59□□□□□ -0.39
PCCB-202ENST00000459873 RGS17Q9UGC6 210 aaPredicted RBP12.59□□□□□ -0.39
PCCB-202ENST00000459873 LRRC37A3O60309 1634 aa12.59□□□□□ -0.39
PCCB-202ENST00000459873 RGPD2P0DJD1 1756 aa12.58□□□□□ -0.39
PCCB-202ENST00000459873 KIF24Q5T7B8 1368 aa12.58□□□□□ -0.4
PCCB-202ENST00000459873 SOX12O15370 315 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms