RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 SBNO1A3KN83 1393 aa30.62■■■□□ 2.49
SSNA1-202ENST00000459860 ST20-MTHFSA0A0A6YYL1 179 aa30.61■■■□□ 2.49
SSNA1-202ENST00000459860 GJD4Q96KN9 370 aaPredicted RBP30.59■■■□□ 2.49
SSNA1-202ENST00000459860 POLR3AO14802 1390 aaPredicted RBP30.58■■■□□ 2.49
SSNA1-202ENST00000459860 PLEKHG3A1L390 1219 aa30.58■■■□□ 2.49
SSNA1-202ENST00000459860 ARHGEF10O15013 1369 aa30.57■■■□□ 2.48
SSNA1-202ENST00000459860 ACEP12821 1306 aa30.57■■■□□ 2.48
SSNA1-202ENST00000459860 SLIT2O94813 1529 aa30.57■■■□□ 2.48
SSNA1-202ENST00000459860 LMOD2Q6P5Q4 547 aa30.56■■■□□ 2.48
SSNA1-202ENST00000459860 ALS2Q96Q42 1657 aa30.55■■■□□ 2.48
SSNA1-202ENST00000459860 UNC5CLQ8IV45 518 aa30.54■■■□□ 2.48
SSNA1-202ENST00000459860 PAK3O75914 559 aaPredicted RBP30.53■■■□□ 2.48
SSNA1-202ENST00000459860 TESK2Q96S53 571 aa30.52■■■□□ 2.48
SSNA1-202ENST00000459860 CABP1Q9NZU7 370 aa30.52■■■□□ 2.48
SSNA1-202ENST00000459860 MARF1Q9Y4F3 1742 aaKnown RBP30.51■■■□□ 2.47
SSNA1-202ENST00000459860 AKAP12Q02952 1782 aa30.49■■■□□ 2.47
SSNA1-202ENST00000459860 CABLES1Q8TDN4 633 aa30.49■■■□□ 2.47
SSNA1-202ENST00000459860 ABCA3Q99758 1704 aa30.49■■■□□ 2.47
SSNA1-202ENST00000459860 HAP1P54257 671 aaPredicted RBP30.48■■■□□ 2.47
SSNA1-202ENST00000459860 TMF1P82094 1093 aa30.48■■■□□ 2.47
SSNA1-202ENST00000459860 EP400Q96L91 3159 aa30.48■■■□□ 2.47
SSNA1-202ENST00000459860 BRD4O60885 1362 aaPredicted RBP30.47■■■□□ 2.47
SSNA1-202ENST00000459860 PUS7Q96PZ0 661 aaKnown RBP30.47■■■□□ 2.47
SSNA1-202ENST00000459860 SRCAPQ6ZRS2 3230 aa30.46■■■□□ 2.47
SSNA1-202ENST00000459860 GLI3P10071 1580 aa30.45■■■□□ 2.47
SSNA1-202ENST00000459860 EIF4G2P78344 907 aaKnown RBP eCLIP30.44■■■□□ 2.46
SSNA1-202ENST00000459860 CCDC125Q86Z20 511 aa30.44■■■□□ 2.46
SSNA1-202ENST00000459860 USP6P35125 1406 aa30.44■■■□□ 2.46
SSNA1-202ENST00000459860 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.44■■■□□ 2.46
SSNA1-202ENST00000459860 TMC1Q8TDI8 760 aa30.43■■■□□ 2.46
SSNA1-202ENST00000459860 PLEKHG5O94827 1062 aa30.42■■■□□ 2.46
SSNA1-202ENST00000459860 CDCA8Q53HL2 280 aa30.42■■■□□ 2.46
SSNA1-202ENST00000459860 ZNF692Q9BU19 519 aaPredicted RBP30.42■■■□□ 2.46
SSNA1-202ENST00000459860 MON2Q7Z3U7 1717 aa30.42■■■□□ 2.46
SSNA1-202ENST00000459860 VPS72Q15906 364 aa30.41■■■□□ 2.46
SSNA1-202ENST00000459860 NINLQ9Y2I6 1382 aa30.41■■■□□ 2.46
SSNA1-202ENST00000459860 CRYBG1Q9Y4K1 1723 aa30.39■■■□□ 2.46
SSNA1-202ENST00000459860 KTN1Q86UP2 1357 aaKnown RBP30.38■■■□□ 2.45
SSNA1-202ENST00000459860 NRKQ7Z2Y5 1582 aa30.37■■■□□ 2.45
SSNA1-202ENST00000459860 PHRF1Q9P1Y6 1649 aaKnown RBP30.37■■■□□ 2.45
SSNA1-202ENST00000459860 ONECUT3O60422 494 aaPredicted RBP30.37■■■□□ 2.45
SSNA1-202ENST00000459860 HDGFL2Q7Z4V5 671 aaPredicted RBP30.37■■■□□ 2.45
SSNA1-202ENST00000459860 CPSF1Q10570 1443 aaKnown RBP30.37■■■□□ 2.45
SSNA1-202ENST00000459860 FAM83GA6ND36 823 aa30.36■■■□□ 2.45
SSNA1-202ENST00000459860 ABTB2Q8N961 1025 aa30.36■■■□□ 2.45
SSNA1-202ENST00000459860 SEPT12Q8IYM1 358 aa30.35■■■□□ 2.45
SSNA1-202ENST00000459860 TERF2IPQ9NYB0 399 aa30.35■■■□□ 2.45
SSNA1-202ENST00000459860 HSPA5P11021 654 aaKnown RBP30.34■■■□□ 2.45
SSNA1-202ENST00000459860 SLC12A5Q9H2X9 1139 aa30.33■■■□□ 2.45
SSNA1-202ENST00000459860 ZRANB1Q9UGI0 708 aa30.33■■■□□ 2.45
SSNA1-202ENST00000459860 PIK3C2AO00443 1686 aa30.32■■■□□ 2.44
SSNA1-202ENST00000459860 CD163L1Q9NR16 1453 aa30.31■■■□□ 2.44
SSNA1-202ENST00000459860 BLMP54132 1417 aaPredicted RBP30.31■■■□□ 2.44
SSNA1-202ENST00000459860 SSH2Q76I76 1423 aa30.31■■■□□ 2.44
SSNA1-202ENST00000459860 NUTM2GQ5VZR2 741 aa30.31■■■□□ 2.44
SSNA1-202ENST00000459860 TTC21AQ8NDW8 1320 aa30.3■■■□□ 2.44
SSNA1-202ENST00000459860 NLRP13Q86W25 1043 aa30.3■■■□□ 2.44
SSNA1-202ENST00000459860 PLCH1Q4KWH8 1693 aa30.3■■■□□ 2.44
SSNA1-202ENST00000459860 TTC21BQ7Z4L5 1316 aa30.28■■■□□ 2.44
SSNA1-202ENST00000459860 A0A1W2PP64 1363 aa30.28■■■□□ 2.44
SSNA1-202ENST00000459860 NWD2Q9ULI1 1742 aa30.27■■■□□ 2.44
SSNA1-202ENST00000459860 MYOM1P52179 1685 aa30.27■■■□□ 2.44
SSNA1-202ENST00000459860 COL14A1Q05707 1796 aaKnown RBP30.26■■■□□ 2.44
SSNA1-202ENST00000459860 EDC4Q6P2E9 1401 aaKnown RBP30.26■■■□□ 2.43
SSNA1-202ENST00000459860 NLRP6P59044 892 aa30.25■■■□□ 2.43
SSNA1-202ENST00000459860 CCDC9Q9Y3X0 531 aaKnown RBP30.25■■■□□ 2.43
SSNA1-202ENST00000459860 DEFB132Q7Z7B7 95 aa30.24■■■□□ 2.43
SSNA1-202ENST00000459860 ANKRD36BQ8N2N9 1353 aa30.24■■■□□ 2.43
SSNA1-202ENST00000459860 USP19O94966 1318 aa30.23■■■□□ 2.43
SSNA1-202ENST00000459860 KRT27Q7Z3Y8 459 aa30.23■■■□□ 2.43
SSNA1-202ENST00000459860 BTG4Q9NY30 223 aa30.23■■■□□ 2.43
SSNA1-202ENST00000459860 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.21■■■□□ 2.43
SSNA1-202ENST00000459860 POLR3GLQ9BT43 218 aa30.21■■■□□ 2.43
SSNA1-202ENST00000459860 SLIT3O75094 1523 aa30.2■■■□□ 2.42
SSNA1-202ENST00000459860 PRDM11Q9NQV5 511 aa30.19■■■□□ 2.42
SSNA1-202ENST00000459860 USP54Q70EL1 1684 aa30.19■■■□□ 2.42
SSNA1-202ENST00000459860 BRWD3Q6RI45 1802 aa30.17■■■□□ 2.42
SSNA1-202ENST00000459860 KIAA0232Q92628 1395 aa30.17■■■□□ 2.42
SSNA1-202ENST00000459860 FAM98CQ17RN3 349 aaKnown RBP30.17■■■□□ 2.42
SSNA1-202ENST00000459860 NRAPQ86VF7 1730 aa30.16■■■□□ 2.42
SSNA1-202ENST00000459860 ZC3H6P61129 1189 aaKnown RBP30.16■■■□□ 2.42
SSNA1-202ENST00000459860 GCP02774 474 aa30.15■■■□□ 2.42
SSNA1-202ENST00000459860 SPATA31A5Q5VU36 1347 aa30.14■■■□□ 2.42
SSNA1-202ENST00000459860 SPATA31A7Q8IWB4 1347 aa30.14■■■□□ 2.42
SSNA1-202ENST00000459860 SF3B2Q13435 895 aaKnown RBP30.13■■■□□ 2.41
SSNA1-202ENST00000459860 KCNH5Q8NCM2 988 aa30.13■■■□□ 2.41
SSNA1-202ENST00000459860 CPDO75976 1380 aa30.13■■■□□ 2.41
SSNA1-202ENST00000459860 USP31Q70CQ4 1352 aa30.13■■■□□ 2.41
SSNA1-202ENST00000459860 NME9Q86XW9 330 aa30.12■■■□□ 2.41
SSNA1-202ENST00000459860 KIF20BQ96Q89 1820 aa30.11■■■□□ 2.41
SSNA1-202ENST00000459860 A0A0G2JS52 829 aa30.09■■■□□ 2.41
SSNA1-202ENST00000459860 MYT1Q01538 1121 aa30.09■■■□□ 2.41
SSNA1-202ENST00000459860 CHRNA2Q15822 529 aa30.08■■■□□ 2.41
SSNA1-202ENST00000459860 ZBTB7CA1YPR0 619 aa30.07■■■□□ 2.4
SSNA1-202ENST00000459860 SOX12O15370 315 aa30.06■■■□□ 2.4
SSNA1-202ENST00000459860 LMO7Q8WWI1 1683 aa30.06■■■□□ 2.4
SSNA1-202ENST00000459860 NFAT5O94916 1531 aa30.06■■■□□ 2.4
SSNA1-202ENST00000459860 OVOS2A0A0J9YW53 1432 aa30.05■■■□□ 2.4
SSNA1-202ENST00000459860 OVOS2Q6IE36 1432 aa30.05■■■□□ 2.4
SSNA1-202ENST00000459860 NSD3Q9BZ95 1437 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms