RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 ZBTB7CA1YPR0 619 aa12.09□□□□□ -0.47
UFD1-205ENST00000459854 CDK19Q9BWU1 502 aa12.09□□□□□ -0.47
UFD1-205ENST00000459854 YTHDC2Q9H6S0 1430 aaKnown RBP12.08□□□□□ -0.48
UFD1-205ENST00000459854 RALGAPBQ86X10 1494 aa12.08□□□□□ -0.48
UFD1-205ENST00000459854 C19orf44Q9H6X5 657 aa12.08□□□□□ -0.48
UFD1-205ENST00000459854 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
UFD1-205ENST00000459854 KIF16BQ96L93 1317 aa12.07□□□□□ -0.48
UFD1-205ENST00000459854 NOC3LQ8WTT2 800 aaKnown RBP12.07□□□□□ -0.48
UFD1-205ENST00000459854 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
UFD1-205ENST00000459854 PRKCSHP14314 528 aaPredicted RBP12.07□□□□□ -0.48
UFD1-205ENST00000459854 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
UFD1-205ENST00000459854 CHMP4CQ96CF2 233 aa12.06□□□□□ -0.48
UFD1-205ENST00000459854 ISY1Q9ULR0 285 aaKnown RBP12.06□□□□□ -0.48
UFD1-205ENST00000459854 ADAMTSL3P82987 1691 aa12.06□□□□□ -0.48
UFD1-205ENST00000459854 PDE4AP27815 886 aa12.06□□□□□ -0.48
UFD1-205ENST00000459854 KIAA1211Q6ZU35 1233 aa12.06□□□□□ -0.48
UFD1-205ENST00000459854 ATP6V1DQ9Y5K8 247 aa12.06□□□□□ -0.48
UFD1-205ENST00000459854 PIK3C2BO00750 1634 aa12.06□□□□□ -0.48
UFD1-205ENST00000459854 TAF3Q5VWG9 929 aa12.05□□□□□ -0.48
UFD1-205ENST00000459854 WASLO00401 505 aaPredicted RBP12.05□□□□□ -0.48
UFD1-205ENST00000459854 ST18O60284 1047 aa12.05□□□□□ -0.48
UFD1-205ENST00000459854 ABCC11Q96J66 1382 aa12.05□□□□□ -0.48
UFD1-205ENST00000459854 LMTK3Q96Q04 1460 aa12.05□□□□□ -0.48
UFD1-205ENST00000459854 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
UFD1-205ENST00000459854 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
UFD1-205ENST00000459854 CWC15Q9P013 229 aaKnown RBP12.05□□□□□ -0.48
UFD1-205ENST00000459854 SYNMO15061 1565 aa12.05□□□□□ -0.48
UFD1-205ENST00000459854 C3P01024 1663 aa12.05□□□□□ -0.48
UFD1-205ENST00000459854 TPM3P06753 285 aa12.04□□□□□ -0.48
UFD1-205ENST00000459854 CHMP4AQ9BY43 222 aa12.04□□□□□ -0.48
UFD1-205ENST00000459854 PODXL2Q9NZ53 605 aa12.04□□□□□ -0.48
UFD1-205ENST00000459854 RRP9O43818 475 aaKnown RBP12.04□□□□□ -0.48
UFD1-205ENST00000459854 PIP4K2BP78356 416 aa12.04□□□□□ -0.48
UFD1-205ENST00000459854 UBAP1LF5GYI3 381 aa12.04□□□□□ -0.48
UFD1-205ENST00000459854 MRE11P49959 708 aa12.04□□□□□ -0.48
UFD1-205ENST00000459854 MORC1Q86VD1 984 aa12.04□□□□□ -0.48
UFD1-205ENST00000459854 SPRYD3Q8NCJ5 442 aa12.04□□□□□ -0.48
UFD1-205ENST00000459854 PIK3C2GO75747 1445 aa12.03□□□□□ -0.48
UFD1-205ENST00000459854 TPRNQ4KMQ1 711 aa12.03□□□□□ -0.48
UFD1-205ENST00000459854 NUDT16Q96DE0 195 aaKnown RBP12.03□□□□□ -0.48
UFD1-205ENST00000459854 DIAPH3Q9NSV4 1193 aa12.03□□□□□ -0.48
UFD1-205ENST00000459854 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
UFD1-205ENST00000459854 ARID3AQ99856 593 aa12.03□□□□□ -0.48
UFD1-205ENST00000459854 CGNL1Q0VF96 1302 aa12.02□□□□□ -0.48
UFD1-205ENST00000459854 KIF3AQ9Y496 699 aa12.02□□□□□ -0.48
UFD1-205ENST00000459854 OS9Q13438 667 aaPredicted RBP12.02□□□□□ -0.49
UFD1-205ENST00000459854 CCDC70Q6NSX1 233 aa12.02□□□□□ -0.49
UFD1-205ENST00000459854 ARGLU1Q9NWB6 273 aaPredicted RBP12.02□□□□□ -0.49
UFD1-205ENST00000459854 CHMP5Q9NZZ3 219 aa12.02□□□□□ -0.49
UFD1-205ENST00000459854 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.01□□□□□ -0.49
UFD1-205ENST00000459854 ACBD3Q9H3P7 528 aa12.01□□□□□ -0.49
UFD1-205ENST00000459854 COG3Q96JB2 828 aa12.01□□□□□ -0.49
UFD1-205ENST00000459854 PHF8Q9UPP1 1060 aa12.01□□□□□ -0.49
UFD1-205ENST00000459854 METP08581 1390 aa12.01□□□□□ -0.49
UFD1-205ENST00000459854 ZBED9Q6R2W3 1325 aa12.01□□□□□ -0.49
UFD1-205ENST00000459854 HMGN5P82970 282 aaKnown RBP12□□□□□ -0.49
UFD1-205ENST00000459854 DDX49Q9Y6V7 483 aaKnown RBP12□□□□□ -0.49
UFD1-205ENST00000459854 AAMPQ13685 434 aa12□□□□□ -0.49
UFD1-205ENST00000459854 PANK3Q9H999 370 aa12□□□□□ -0.49
UFD1-205ENST00000459854 MYO3AQ8NEV4 1616 aa12□□□□□ -0.49
UFD1-205ENST00000459854 CC2D1BQ5T0F9 858 aaKnown RBP12□□□□□ -0.49
UFD1-205ENST00000459854 CABP1Q9NZU7 370 aa12□□□□□ -0.49
UFD1-205ENST00000459854 SOX12O15370 315 aa12□□□□□ -0.49
UFD1-205ENST00000459854 APPP05067 770 aa12□□□□□ -0.49
UFD1-205ENST00000459854 FAM13BQ9NYF5 915 aa12□□□□□ -0.49
UFD1-205ENST00000459854 HDAC5Q9UQL6 1122 aa11.99□□□□□ -0.49
UFD1-205ENST00000459854 ZNF335Q9H4Z2 1342 aaPredicted RBP11.99□□□□□ -0.49
UFD1-205ENST00000459854 NEURL4Q96JN8 1562 aa11.99□□□□□ -0.49
UFD1-205ENST00000459854 TMEM94Q12767 1356 aa11.99□□□□□ -0.49
UFD1-205ENST00000459854 NINLQ9Y2I6 1382 aa11.99□□□□□ -0.49
UFD1-205ENST00000459854 PUS7Q96PZ0 661 aaKnown RBP11.98□□□□□ -0.49
UFD1-205ENST00000459854 CCDC39Q9UFE4 941 aa11.98□□□□□ -0.49
UFD1-205ENST00000459854 SLIT1O75093 1534 aa11.98□□□□□ -0.49
UFD1-205ENST00000459854 NGEFQ8N5V2 710 aa11.98□□□□□ -0.49
UFD1-205ENST00000459854 CCDC7Q96M83 1385 aa11.98□□□□□ -0.49
UFD1-205ENST00000459854 MFAP1P55081 439 aaKnown RBP11.98□□□□□ -0.49
UFD1-205ENST00000459854 KIF7Q2M1P5 1343 aa11.98□□□□□ -0.49
UFD1-205ENST00000459854 TMEM131LA2VDJ0 1609 aa11.97□□□□□ -0.49
UFD1-205ENST00000459854 GNL2Q13823 731 aaKnown RBP11.97□□□□□ -0.49
UFD1-205ENST00000459854 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
UFD1-205ENST00000459854 NEXMIFQ5QGS0 1516 aa11.97□□□□□ -0.49
UFD1-205ENST00000459854 GOLGA2Q08379 1002 aa11.97□□□□□ -0.49
UFD1-205ENST00000459854 HMMRO75330 724 aa11.97□□□□□ -0.49
UFD1-205ENST00000459854 ARHGAP23Q9P227 1491 aa11.96□□□□□ -0.49
UFD1-205ENST00000459854 FAM135BQ49AJ0 1406 aa11.96□□□□□ -0.49
UFD1-205ENST00000459854 NPHP3Q7Z494 1330 aa11.96□□□□□ -0.49
UFD1-205ENST00000459854 MEX3CQ5U5Q3 659 aaKnown RBP11.96□□□□□ -0.49
UFD1-205ENST00000459854 ABTB2Q8N961 1025 aa11.96□□□□□ -0.5
UFD1-205ENST00000459854 ALKQ9UM73 1620 aa11.95□□□□□ -0.5
UFD1-205ENST00000459854 NLRP6P59044 892 aa11.95□□□□□ -0.5
UFD1-205ENST00000459854 NLRP13Q86W25 1043 aa11.95□□□□□ -0.5
UFD1-205ENST00000459854 SLC12A5Q9H2X9 1139 aa11.95□□□□□ -0.5
UFD1-205ENST00000459854 GOLGA6L19H0YKK7 550 aa11.95□□□□□ -0.5
UFD1-205ENST00000459854 DIP2AQ14689 1571 aa11.94□□□□□ -0.5
UFD1-205ENST00000459854 CSB-PGBD3P0DP91 1061 aa11.94□□□□□ -0.5
UFD1-205ENST00000459854 AMPHP49418 695 aa11.94□□□□□ -0.5
UFD1-205ENST00000459854 LAMC1P11047 1609 aa11.94□□□□□ -0.5
UFD1-205ENST00000459854 FOXO3O43524 673 aa11.94□□□□□ -0.5
UFD1-205ENST00000459854 NUCB2P80303 420 aa11.94□□□□□ -0.5
UFD1-205ENST00000459854 TSPYL1Q9H0U9 437 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms