RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 GLI3P10071 1580 aa14.35□□□□□ -0.11
HDLBP-228ENST00000459788 SIN3AQ96ST3 1273 aa14.35□□□□□ -0.11
HDLBP-228ENST00000459788 PHRF1Q9P1Y6 1649 aaKnown RBP14.34□□□□□ -0.11
HDLBP-228ENST00000459788 VPS72Q15906 364 aa14.34□□□□□ -0.11
HDLBP-228ENST00000459788 LMOD2Q6P5Q4 547 aa14.34□□□□□ -0.11
HDLBP-228ENST00000459788 RALGAPBQ86X10 1494 aa14.33□□□□□ -0.12
HDLBP-228ENST00000459788 ROCK2O75116 1388 aaKnown RBP14.33□□□□□ -0.12
HDLBP-228ENST00000459788 SBNO2Q9Y2G9 1366 aa14.33□□□□□ -0.12
HDLBP-228ENST00000459788 BRWD3Q6RI45 1802 aa14.32□□□□□ -0.12
HDLBP-228ENST00000459788 ONECUT3O60422 494 aaPredicted RBP14.32□□□□□ -0.12
HDLBP-228ENST00000459788 NBPF8Q3BBV2 869 aa14.32□□□□□ -0.12
HDLBP-228ENST00000459788 CCDC125Q86Z20 511 aa14.32□□□□□ -0.12
HDLBP-228ENST00000459788 CABLES1Q8TDN4 633 aa14.32□□□□□ -0.12
HDLBP-228ENST00000459788 ACEP12821 1306 aa14.32□□□□□ -0.12
HDLBP-228ENST00000459788 EVC2Q86UK5 1308 aa14.32□□□□□ -0.12
HDLBP-228ENST00000459788 NEUROD1Q13562 356 aa14.31□□□□□ -0.12
HDLBP-228ENST00000459788 PPIP5K1Q6PFW1 1433 aa14.31□□□□□ -0.12
HDLBP-228ENST00000459788 EP400Q96L91 3159 aa14.3□□□□□ -0.12
HDLBP-228ENST00000459788 AKAP12Q02952 1782 aa14.3□□□□□ -0.12
HDLBP-228ENST00000459788 FAM83GA6ND36 823 aa14.3□□□□□ -0.12
HDLBP-228ENST00000459788 SRPK2P78362 688 aaKnown RBP14.3□□□□□ -0.12
HDLBP-228ENST00000459788 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-228ENST00000459788 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
HDLBP-228ENST00000459788 NRKQ7Z2Y5 1582 aa14.27□□□□□ -0.12
HDLBP-228ENST00000459788 CPDO75976 1380 aa14.27□□□□□ -0.12
HDLBP-228ENST00000459788 USP19O94966 1318 aa14.27□□□□□ -0.12
HDLBP-228ENST00000459788 SLC24A1O60721 1099 aa14.27□□□□□ -0.13
HDLBP-228ENST00000459788 USP6P35125 1406 aa14.26□□□□□ -0.13
HDLBP-228ENST00000459788 NLRP13Q86W25 1043 aa14.26□□□□□ -0.13
HDLBP-228ENST00000459788 ZNF692Q9BU19 519 aaPredicted RBP14.26□□□□□ -0.13
HDLBP-228ENST00000459788 BTG4Q9NY30 223 aa14.26□□□□□ -0.13
HDLBP-228ENST00000459788 ABTB2Q8N961 1025 aa14.25□□□□□ -0.13
HDLBP-228ENST00000459788 PUS7Q96PZ0 661 aaKnown RBP14.25□□□□□ -0.13
HDLBP-228ENST00000459788 CABP2Q9NPB3 220 aa14.25□□□□□ -0.13
HDLBP-228ENST00000459788 PRDM11Q9NQV5 511 aa14.25□□□□□ -0.13
HDLBP-228ENST00000459788 SSH2Q76I76 1423 aa14.24□□□□□ -0.13
HDLBP-228ENST00000459788 LMO7Q8WWI1 1683 aa14.24□□□□□ -0.13
HDLBP-228ENST00000459788 MON2Q7Z3U7 1717 aa14.24□□□□□ -0.13
HDLBP-228ENST00000459788 THSD7AQ9UPZ6 1657 aa14.23□□□□□ -0.13
HDLBP-228ENST00000459788 KIAA0232Q92628 1395 aa14.23□□□□□ -0.13
HDLBP-228ENST00000459788 SPATA31A5Q5VU36 1347 aa14.23□□□□□ -0.13
HDLBP-228ENST00000459788 SPATA31A7Q8IWB4 1347 aa14.23□□□□□ -0.13
HDLBP-228ENST00000459788 POTEDQ86YR6 584 aa14.23□□□□□ -0.13
HDLBP-228ENST00000459788 SEPT12Q8IYM1 358 aa14.23□□□□□ -0.13
HDLBP-228ENST00000459788 CARD11Q9BXL7 1154 aa14.23□□□□□ -0.13
HDLBP-228ENST00000459788 CABP1Q9NZU7 370 aa14.23□□□□□ -0.13
HDLBP-228ENST00000459788 SLIT3O75094 1523 aa14.23□□□□□ -0.13
HDLBP-228ENST00000459788 USP54Q70EL1 1684 aa14.23□□□□□ -0.13
HDLBP-228ENST00000459788 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
HDLBP-228ENST00000459788 PIK3C2AO00443 1686 aa14.22□□□□□ -0.13
HDLBP-228ENST00000459788 BLMP54132 1417 aaPredicted RBP14.22□□□□□ -0.13
HDLBP-228ENST00000459788 CPSF1Q10570 1443 aaKnown RBP14.22□□□□□ -0.13
HDLBP-228ENST00000459788 TTC21AQ8NDW8 1320 aa14.21□□□□□ -0.13
HDLBP-228ENST00000459788 TIMELESSQ9UNS1 1208 aa14.21□□□□□ -0.13
HDLBP-228ENST00000459788 CCDC9Q9Y3X0 531 aaKnown RBP14.21□□□□□ -0.13
HDLBP-228ENST00000459788 KRT27Q7Z3Y8 459 aa14.2□□□□□ -0.14
HDLBP-228ENST00000459788 ABCC6O95255 1503 aa14.2□□□□□ -0.14
HDLBP-228ENST00000459788 RGPD1P0DJD0 1748 aa14.19□□□□□ -0.14
HDLBP-228ENST00000459788 GCP02774 474 aa14.19□□□□□ -0.14
HDLBP-228ENST00000459788 SPATA31A1Q5TZJ5 1347 aa14.18□□□□□ -0.14
HDLBP-228ENST00000459788 CAMTA1Q9Y6Y1 1673 aa14.18□□□□□ -0.14
HDLBP-228ENST00000459788 PLEKHG5O94827 1062 aa14.18□□□□□ -0.14
HDLBP-228ENST00000459788 COL18A1P39060 1754 aa14.18□□□□□ -0.14
HDLBP-228ENST00000459788 NINLQ9Y2I6 1382 aa14.18□□□□□ -0.14
HDLBP-228ENST00000459788 NLRP6P59044 892 aa14.17□□□□□ -0.14
HDLBP-228ENST00000459788 ZC3H6P61129 1189 aaKnown RBP14.17□□□□□ -0.14
HDLBP-228ENST00000459788 BARGINQ6ZT62 677 aa14.17□□□□□ -0.14
HDLBP-228ENST00000459788 KCNH5Q8NCM2 988 aa14.17□□□□□ -0.14
HDLBP-228ENST00000459788 THRAP3Q9Y2W1 955 aaKnown RBP14.17□□□□□ -0.14
HDLBP-228ENST00000459788 AATKQ6ZMQ8 1374 aa14.17□□□□□ -0.14
HDLBP-228ENST00000459788 TTC21BQ7Z4L5 1316 aa14.16□□□□□ -0.14
HDLBP-228ENST00000459788 PARP4Q9UKK3 1724 aaKnown RBP14.16□□□□□ -0.14
HDLBP-228ENST00000459788 FAM98CQ17RN3 349 aaKnown RBP14.16□□□□□ -0.14
HDLBP-228ENST00000459788 NUTM2GQ5VZR2 741 aa14.16□□□□□ -0.14
HDLBP-228ENST00000459788 COL5A2P05997 1499 aaPredicted RBP14.15□□□□□ -0.14
HDLBP-228ENST00000459788 KTN1Q86UP2 1357 aaKnown RBP14.15□□□□□ -0.14
HDLBP-228ENST00000459788 C11orf95C9JLR9 678 aaPredicted RBP14.15□□□□□ -0.14
HDLBP-228ENST00000459788 SF3B2Q13435 895 aaKnown RBP14.15□□□□□ -0.14
HDLBP-228ENST00000459788 USP31Q70CQ4 1352 aa14.14□□□□□ -0.15
HDLBP-228ENST00000459788 EVA1CP58658 441 aa14.14□□□□□ -0.15
HDLBP-228ENST00000459788 CHRNA2Q15822 529 aa14.14□□□□□ -0.15
HDLBP-228ENST00000459788 WNK3Q9BYP7 1800 aa14.13□□□□□ -0.15
HDLBP-228ENST00000459788 CD163L1Q9NR16 1453 aa14.13□□□□□ -0.15
HDLBP-228ENST00000459788 RGPD5Q99666 1765 aa14.13□□□□□ -0.15
HDLBP-228ENST00000459788 CRB1P82279 1406 aa14.13□□□□□ -0.15
HDLBP-228ENST00000459788 NFAT5O94916 1531 aa14.12□□□□□ -0.15
HDLBP-228ENST00000459788 HDGFL2Q7Z4V5 671 aaPredicted RBP14.12□□□□□ -0.15
HDLBP-228ENST00000459788 TCP11L2Q8N4U5 519 aa14.12□□□□□ -0.15
HDLBP-228ENST00000459788 TERF2IPQ9NYB0 399 aa14.12□□□□□ -0.15
HDLBP-228ENST00000459788 DISP2A7MBM2 1401 aa14.12□□□□□ -0.15
HDLBP-228ENST00000459788 EDC4Q6P2E9 1401 aaKnown RBP14.12□□□□□ -0.15
HDLBP-228ENST00000459788 TNS1Q9HBL0 1735 aaKnown RBP14.12□□□□□ -0.15
HDLBP-228ENST00000459788 A0A0G2JS52 829 aa14.11□□□□□ -0.15
HDLBP-228ENST00000459788 MYT1Q01538 1121 aa14.11□□□□□ -0.15
HDLBP-228ENST00000459788 TESK2Q96S53 571 aa14.11□□□□□ -0.15
HDLBP-228ENST00000459788 STRN4Q9NRL3 753 aa14.11□□□□□ -0.15
HDLBP-228ENST00000459788 ZRANB1Q9UGI0 708 aa14.11□□□□□ -0.15
HDLBP-228ENST00000459788 LTN1O94822 1766 aa14.11□□□□□ -0.15
HDLBP-228ENST00000459788 FAM196AQ6ZSG2 479 aa14.1□□□□□ -0.15
HDLBP-228ENST00000459788 ARHGEF25Q86VW2 580 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms