RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ANP32CO43423 234 aa14.09□□□□□ -0.15
USP39-210ENST00000459775 PUS7Q96PZ0 661 aaKnown RBP14.09□□□□□ -0.15
USP39-210ENST00000459775 DCCP43146 1447 aa14.09□□□□□ -0.15
USP39-210ENST00000459775 CD163L1Q9NR16 1453 aa14.09□□□□□ -0.15
USP39-210ENST00000459775 ADGRB2O60241 1585 aa14.08□□□□□ -0.16
USP39-210ENST00000459775 RXRBP28702 533 aa14.08□□□□□ -0.16
USP39-210ENST00000459775 ORAI2Q96SN7 254 aa14.08□□□□□ -0.16
USP39-210ENST00000459775 C19orf44Q9H6X5 657 aa14.08□□□□□ -0.16
USP39-210ENST00000459775 KNSTRNQ9Y448 316 aa14.08□□□□□ -0.16
USP39-210ENST00000459775 USP32Q8NFA0 1604 aa14.07□□□□□ -0.16
USP39-210ENST00000459775 NSD3Q9BZ95 1437 aa14.07□□□□□ -0.16
USP39-210ENST00000459775 PLCB2Q00722 1185 aa14.07□□□□□ -0.16
USP39-210ENST00000459775 CCDC184Q52MB2 194 aa14.07□□□□□ -0.16
USP39-210ENST00000459775 PRKRIP1Q9H875 184 aaPredicted RBP14.07□□□□□ -0.16
USP39-210ENST00000459775 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.06□□□□□ -0.16
USP39-210ENST00000459775 ACEP12821 1306 aa14.06□□□□□ -0.16
USP39-210ENST00000459775 ESCO1Q5FWF5 840 aa14.06□□□□□ -0.16
USP39-210ENST00000459775 ANKRD36BQ8N2N9 1353 aa14.05□□□□□ -0.16
USP39-210ENST00000459775 ATF3P18847 181 aa14.05□□□□□ -0.16
USP39-210ENST00000459775 TERF2IPQ9NYB0 399 aa14.05□□□□□ -0.16
USP39-210ENST00000459775 ZRANB1Q9UGI0 708 aa14.05□□□□□ -0.16
USP39-210ENST00000459775 RGPD8O14715 1765 aaPredicted RBP14.05□□□□□ -0.16
USP39-210ENST00000459775 CENPBP07199 599 aaPredicted RBP14.04□□□□□ -0.16
USP39-210ENST00000459775 TNNT2P45379 298 aaPredicted RBP14.04□□□□□ -0.16
USP39-210ENST00000459775 XPCQ01831 940 aaPredicted RBP14.04□□□□□ -0.16
USP39-210ENST00000459775 TMEM132AQ24JP5 1023 aa14.04□□□□□ -0.16
USP39-210ENST00000459775 DDX17Q92841 729 aaKnown RBP14.04□□□□□ -0.16
USP39-210ENST00000459775 HDGFL2Q7Z4V5 671 aaPredicted RBP14.03□□□□□ -0.16
USP39-210ENST00000459775 NGDNQ8NEJ9 315 aaKnown RBP14.03□□□□□ -0.16
USP39-210ENST00000459775 GGNBP2Q9H3C7 697 aa14.03□□□□□ -0.16
USP39-210ENST00000459775 PLEKHG3A1L390 1219 aa14.03□□□□□ -0.16
USP39-210ENST00000459775 NEFLP07196 543 aa14.03□□□□□ -0.16
USP39-210ENST00000459775 PDE4CQ08493 712 aa14.03□□□□□ -0.16
USP39-210ENST00000459775 CDC42BPGQ6DT37 1551 aa14.03□□□□□ -0.16
USP39-210ENST00000459775 KTN1Q86UP2 1357 aaKnown RBP14.03□□□□□ -0.16
USP39-210ENST00000459775 PHF8Q9UPP1 1060 aa14.02□□□□□ -0.16
USP39-210ENST00000459775 FMN2Q9NZ56 1722 aa14.02□□□□□ -0.17
USP39-210ENST00000459775 CPSF1Q10570 1443 aaKnown RBP14.02□□□□□ -0.17
USP39-210ENST00000459775 FOXO3O43524 673 aa14.02□□□□□ -0.17
USP39-210ENST00000459775 FBLN1P23142 703 aa14.02□□□□□ -0.17
USP39-210ENST00000459775 NME9Q86XW9 330 aa14.02□□□□□ -0.17
USP39-210ENST00000459775 NHSL1Q5SYE7 1610 aa14.01□□□□□ -0.17
USP39-210ENST00000459775 FYB1O15117 783 aa14□□□□□ -0.17
USP39-210ENST00000459775 NINLQ9Y2I6 1382 aa14□□□□□ -0.17
USP39-210ENST00000459775 C1orf167Q5SNV9 1468 aa13.99□□□□□ -0.17
USP39-210ENST00000459775 NUTM2GQ5VZR2 741 aa13.99□□□□□ -0.17
USP39-210ENST00000459775 MST1RQ04912 1400 aa13.99□□□□□ -0.17
USP39-210ENST00000459775 ANKARQ7Z5J8 1434 aa13.99□□□□□ -0.17
USP39-210ENST00000459775 TOPAZ1Q8N9V7 1692 aa13.99□□□□□ -0.17
USP39-210ENST00000459775 PKNOX2Q96KN3 472 aa13.99□□□□□ -0.17
USP39-210ENST00000459775 AFF2P51816 1311 aa13.98□□□□□ -0.17
USP39-210ENST00000459775 CGNL1Q0VF96 1302 aa13.98□□□□□ -0.17
USP39-210ENST00000459775 PARD3Q8TEW0 1356 aa13.98□□□□□ -0.17
USP39-210ENST00000459775 RGS12O14924 1447 aa13.97□□□□□ -0.17
USP39-210ENST00000459775 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
USP39-210ENST00000459775 RBM6P78332 1123 aaKnown RBP13.97□□□□□ -0.17
USP39-210ENST00000459775 BRINP3Q76B58 766 aa13.97□□□□□ -0.17
USP39-210ENST00000459775 MORC1Q86VD1 984 aa13.97□□□□□ -0.17
USP39-210ENST00000459775 TTC21BQ7Z4L5 1316 aa13.97□□□□□ -0.17
USP39-210ENST00000459775 POLR3AO14802 1390 aaPredicted RBP13.96□□□□□ -0.17
USP39-210ENST00000459775 USP6P35125 1406 aa13.96□□□□□ -0.17
USP39-210ENST00000459775 LRRC59Q96AG4 307 aaKnown RBP13.96□□□□□ -0.17
USP39-210ENST00000459775 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.17
USP39-210ENST00000459775 PSME1Q06323 249 aa13.96□□□□□ -0.18
USP39-210ENST00000459775 SOX12O15370 315 aa13.95□□□□□ -0.18
USP39-210ENST00000459775 RALBP1Q15311 655 aa13.95□□□□□ -0.18
USP39-210ENST00000459775 NGLY1Q96IV0 654 aa13.95□□□□□ -0.18
USP39-210ENST00000459775 PPP2R1AP30153 589 aa13.94□□□□□ -0.18
USP39-210ENST00000459775 YTHDC1Q96MU7 727 aaKnown RBP13.94□□□□□ -0.18
USP39-210ENST00000459775 EDC4Q6P2E9 1401 aaKnown RBP13.94□□□□□ -0.18
USP39-210ENST00000459775 MRS2Q9HD23 443 aa13.94□□□□□ -0.18
USP39-210ENST00000459775 SSH2Q76I76 1423 aa13.93□□□□□ -0.18
USP39-210ENST00000459775 SENP3-EIF4A1A0A087X0R7 540 aa13.93□□□□□ -0.18
USP39-210ENST00000459775 NUTM2BA6NNL0 878 aaPredicted RBP13.93□□□□□ -0.18
USP39-210ENST00000459775 NUTM2EB1AL46 878 aaPredicted RBP13.93□□□□□ -0.18
USP39-210ENST00000459775 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
USP39-210ENST00000459775 NUTM2AQ8IVF1 878 aaPredicted RBP13.93□□□□□ -0.18
USP39-210ENST00000459775 MYBBP1AQ9BQG0 1328 aaKnown RBP13.93□□□□□ -0.18
USP39-210ENST00000459775 PNPLA6Q8IY17 1366 aa13.92□□□□□ -0.18
USP39-210ENST00000459775 NPC1L1Q9UHC9 1359 aa13.92□□□□□ -0.18
USP39-210ENST00000459775 KRT28Q7Z3Y7 464 aa13.92□□□□□ -0.18
USP39-210ENST00000459775 CHMP4AQ9BY43 222 aa13.92□□□□□ -0.18
USP39-210ENST00000459775 AKAP12Q02952 1782 aa13.92□□□□□ -0.18
USP39-210ENST00000459775 ITSN1Q15811 1721 aa13.92□□□□□ -0.18
USP39-210ENST00000459775 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
USP39-210ENST00000459775 ABTB2Q8N961 1025 aa13.91□□□□□ -0.18
USP39-210ENST00000459775 QTRT2Q9H974 415 aaKnown RBP13.91□□□□□ -0.18
USP39-210ENST00000459775 MON2Q7Z3U7 1717 aa13.91□□□□□ -0.18
USP39-210ENST00000459775 TAF7LQ5H9L4 462 aa13.9□□□□□ -0.18
USP39-210ENST00000459775 NLRP6P59044 892 aa13.9□□□□□ -0.18
USP39-210ENST00000459775 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.18
USP39-210ENST00000459775 NRKQ7Z2Y5 1582 aa13.89□□□□□ -0.19
USP39-210ENST00000459775 RRS1Q15050 365 aaKnown RBP13.89□□□□□ -0.19
USP39-210ENST00000459775 COG3Q96JB2 828 aa13.89□□□□□ -0.19
USP39-210ENST00000459775 PPM1GO15355 546 aaPredicted RBP13.88□□□□□ -0.19
USP39-210ENST00000459775 MTHFSP49914 203 aa13.88□□□□□ -0.19
USP39-210ENST00000459775 NLRP13Q86W25 1043 aa13.88□□□□□ -0.19
USP39-210ENST00000459775 CCDC125Q86Z20 511 aa13.88□□□□□ -0.19
USP39-210ENST00000459775 C8orf37Q96NL8 207 aa13.88□□□□□ -0.19
USP39-210ENST00000459775 EMILIN1Q9Y6C2 1016 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms