RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 CCDC61Q9Y6R9 512 aa12.11□□□□□ -0.47
CDC42EP3-204ENST00000457889 NSD3Q9BZ95 1437 aa12.11□□□□□ -0.47
CDC42EP3-204ENST00000457889 ADGRL3Q9HAR2 1447 aa12.11□□□□□ -0.47
CDC42EP3-204ENST00000457889 NLRP13Q86W25 1043 aa12.1□□□□□ -0.47
CDC42EP3-204ENST00000457889 SLC12A5Q9H2X9 1139 aa12.1□□□□□ -0.47
CDC42EP3-204ENST00000457889 TOPAZ1Q8N9V7 1692 aa12.1□□□□□ -0.47
CDC42EP3-204ENST00000457889 ITSN1Q15811 1721 aa12.09□□□□□ -0.47
CDC42EP3-204ENST00000457889 A0A1W2PP64 1363 aa12.09□□□□□ -0.47
CDC42EP3-204ENST00000457889 CD163L1Q9NR16 1453 aa12.08□□□□□ -0.47
CDC42EP3-204ENST00000457889 NUDT16Q96DE0 195 aaKnown RBP12.08□□□□□ -0.48
CDC42EP3-204ENST00000457889 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.48
CDC42EP3-204ENST00000457889 CPSF1Q10570 1443 aaKnown RBP12.08□□□□□ -0.48
CDC42EP3-204ENST00000457889 PPIP5K1Q6PFW1 1433 aa12.08□□□□□ -0.48
CDC42EP3-204ENST00000457889 DCCP43146 1447 aa12.07□□□□□ -0.48
CDC42EP3-204ENST00000457889 EDC4Q6P2E9 1401 aaKnown RBP12.07□□□□□ -0.48
CDC42EP3-204ENST00000457889 FMN2Q9NZ56 1722 aa12.06□□□□□ -0.48
CDC42EP3-204ENST00000457889 PLEKHG3A1L390 1219 aa12.06□□□□□ -0.48
CDC42EP3-204ENST00000457889 MRS2Q9HD23 443 aa12.06□□□□□ -0.48
CDC42EP3-204ENST00000457889 CABP1Q9NZU7 370 aa12.06□□□□□ -0.48
CDC42EP3-204ENST00000457889 NALCNQ8IZF0 1738 aa12.06□□□□□ -0.48
CDC42EP3-204ENST00000457889 INSRP06213 1382 aa12.05□□□□□ -0.48
CDC42EP3-204ENST00000457889 STRCQ7RTU9 1775 aa12.05□□□□□ -0.48
CDC42EP3-204ENST00000457889 HSPA2P54652 639 aa12.05□□□□□ -0.48
CDC42EP3-204ENST00000457889 MON2Q7Z3U7 1717 aa12.04□□□□□ -0.48
CDC42EP3-204ENST00000457889 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
CDC42EP3-204ENST00000457889 AKAP12Q02952 1782 aa12.04□□□□□ -0.48
CDC42EP3-204ENST00000457889 PRR36Q9H6K5 1346 aa12.04□□□□□ -0.48
CDC42EP3-204ENST00000457889 POLR3AO14802 1390 aaPredicted RBP12.04□□□□□ -0.48
CDC42EP3-204ENST00000457889 ANKRD26Q9UPS8 1709 aa12.03□□□□□ -0.48
CDC42EP3-204ENST00000457889 CENPBP07199 599 aaPredicted RBP12.03□□□□□ -0.48
CDC42EP3-204ENST00000457889 PROSER2Q86WR7 435 aaPredicted RBP12.02□□□□□ -0.49
CDC42EP3-204ENST00000457889 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
CDC42EP3-204ENST00000457889 C19orf44Q9H6X5 657 aa12.01□□□□□ -0.49
CDC42EP3-204ENST00000457889 KIF20BQ96Q89 1820 aa12.01□□□□□ -0.49
CDC42EP3-204ENST00000457889 USP6P35125 1406 aa12.01□□□□□ -0.49
CDC42EP3-204ENST00000457889 PPP2R1AP30153 589 aa12□□□□□ -0.49
CDC42EP3-204ENST00000457889 C14orf37Q86TY3 774 aa12□□□□□ -0.49
CDC42EP3-204ENST00000457889 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
CDC42EP3-204ENST00000457889 TTC21AQ8NDW8 1320 aa12□□□□□ -0.49
CDC42EP3-204ENST00000457889 NRKQ7Z2Y5 1582 aa12□□□□□ -0.49
CDC42EP3-204ENST00000457889 TMEM94Q12767 1356 aa11.99□□□□□ -0.49
CDC42EP3-204ENST00000457889 ACEP12821 1306 aa11.98□□□□□ -0.49
CDC42EP3-204ENST00000457889 FYB1O15117 783 aa11.98□□□□□ -0.49
CDC42EP3-204ENST00000457889 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
CDC42EP3-204ENST00000457889 PNISRQ8TF01 805 aaKnown RBP11.98□□□□□ -0.49
CDC42EP3-204ENST00000457889 STRCP1A6NGW2 1772 aa11.97□□□□□ -0.49
CDC42EP3-204ENST00000457889 KIF1AQ12756 1690 aa11.97□□□□□ -0.49
CDC42EP3-204ENST00000457889 LRRC7Q96NW7 1537 aa11.97□□□□□ -0.49
CDC42EP3-204ENST00000457889 SSH2Q76I76 1423 aa11.97□□□□□ -0.49
CDC42EP3-204ENST00000457889 MSH6P52701 1360 aa11.97□□□□□ -0.49
CDC42EP3-204ENST00000457889 CADPS2Q86UW7 1296 aa11.97□□□□□ -0.49
CDC42EP3-204ENST00000457889 AATKQ6ZMQ8 1374 aa11.96□□□□□ -0.49
CDC42EP3-204ENST00000457889 CNGB1Q14028 1251 aaPredicted RBP11.96□□□□□ -0.49
CDC42EP3-204ENST00000457889 NGDNQ8NEJ9 315 aaKnown RBP11.96□□□□□ -0.49
CDC42EP3-204ENST00000457889 TTC21BQ7Z4L5 1316 aa11.95□□□□□ -0.5
CDC42EP3-204ENST00000457889 ATF3P18847 181 aa11.95□□□□□ -0.5
CDC42EP3-204ENST00000457889 CCDC184Q52MB2 194 aa11.95□□□□□ -0.5
CDC42EP3-204ENST00000457889 CFAP53Q96M91 514 aa11.95□□□□□ -0.5
CDC42EP3-204ENST00000457889 YTHDC1Q96MU7 727 aaKnown RBP11.95□□□□□ -0.5
CDC42EP3-204ENST00000457889 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
CDC42EP3-204ENST00000457889 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
CDC42EP3-204ENST00000457889 USP31Q70CQ4 1352 aa11.94□□□□□ -0.5
CDC42EP3-204ENST00000457889 USP54Q70EL1 1684 aa11.94□□□□□ -0.5
CDC42EP3-204ENST00000457889 POTEIP0CG38 1075 aa11.94□□□□□ -0.5
CDC42EP3-204ENST00000457889 COG3Q96JB2 828 aa11.94□□□□□ -0.5
CDC42EP3-204ENST00000457889 OVOS2A0A0J9YW53 1432 aa11.94□□□□□ -0.5
CDC42EP3-204ENST00000457889 OVOS2Q6IE36 1432 aa11.94□□□□□ -0.5
CDC42EP3-204ENST00000457889 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
CDC42EP3-204ENST00000457889 RGPD8O14715 1765 aaPredicted RBP11.93□□□□□ -0.5
CDC42EP3-204ENST00000457889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDC42EP3-204ENST00000457889 FAM9BQ8IZU0 186 aa11.93□□□□□ -0.5
CDC42EP3-204ENST00000457889 GGNBP2Q9H3C7 697 aa11.93□□□□□ -0.5
CDC42EP3-204ENST00000457889 MST1RQ04912 1400 aa11.93□□□□□ -0.5
CDC42EP3-204ENST00000457889 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
CDC42EP3-204ENST00000457889 WDR43Q15061 677 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDC42EP3-204ENST00000457889 LHX8Q68G74 356 aa11.92□□□□□ -0.5
CDC42EP3-204ENST00000457889 BLMP54132 1417 aaPredicted RBP11.92□□□□□ -0.5
CDC42EP3-204ENST00000457889 PMFBP1Q8TBY8 1022 aa11.91□□□□□ -0.5
CDC42EP3-204ENST00000457889 PNPLA6Q8IY17 1366 aa11.91□□□□□ -0.5
CDC42EP3-204ENST00000457889 ZBED9Q6R2W3 1325 aa11.9□□□□□ -0.5
CDC42EP3-204ENST00000457889 ZNF335Q9H4Z2 1342 aaPredicted RBP11.9□□□□□ -0.5
CDC42EP3-204ENST00000457889 CDK12Q9NYV4 1490 aaPredicted RBP11.9□□□□□ -0.5
CDC42EP3-204ENST00000457889 HNRNPUQ00839 825 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDC42EP3-204ENST00000457889 ESCO1Q5FWF5 840 aa11.9□□□□□ -0.5
CDC42EP3-204ENST00000457889 NME9Q86XW9 330 aa11.9□□□□□ -0.5
CDC42EP3-204ENST00000457889 NGEFQ8N5V2 710 aa11.9□□□□□ -0.5
CDC42EP3-204ENST00000457889 XIRP1Q702N8 1843 aaKnown RBP11.9□□□□□ -0.5
CDC42EP3-204ENST00000457889 KIF24Q5T7B8 1368 aa11.9□□□□□ -0.5
CDC42EP3-204ENST00000457889 MTHFSP49914 203 aa11.89□□□□□ -0.51
CDC42EP3-204ENST00000457889 PIK3C2AO00443 1686 aa11.88□□□□□ -0.51
CDC42EP3-204ENST00000457889 PSME1Q06323 249 aa11.88□□□□□ -0.51
CDC42EP3-204ENST00000457889 RBM33Q96EV2 1170 aaKnown RBP11.88□□□□□ -0.51
CDC42EP3-204ENST00000457889 NUDCQ9Y266 331 aa11.88□□□□□ -0.51
CDC42EP3-204ENST00000457889 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
CDC42EP3-204ENST00000457889 NPHP3Q7Z494 1330 aa11.87□□□□□ -0.51
CDC42EP3-204ENST00000457889 TNNT2P45379 298 aaPredicted RBP11.87□□□□□ -0.51
CDC42EP3-204ENST00000457889 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
CDC42EP3-204ENST00000457889 SBNO1A3KN83 1393 aa11.86□□□□□ -0.51
CDC42EP3-204ENST00000457889 SHPRHQ149N8 1683 aa11.85□□□□□ -0.51
CDC42EP3-204ENST00000457889 ORAI2Q96SN7 254 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms