RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 PRR7Q8TB68 274 aa8.9□□□□□ -0.98
UBDP1-202ENST00000457888 WDR4P57081 412 aaKnown RBP8.89□□□□□ -0.99
UBDP1-202ENST00000457888 KDM2AQ9Y2K7 1162 aa8.89□□□□□ -0.99
UBDP1-202ENST00000457888 MOXD2PA6NHM9 499 aa8.88□□□□□ -0.99
UBDP1-202ENST00000457888 SOBPA7XYQ1 873 aa8.88□□□□□ -0.99
UBDP1-202ENST00000457888 VSIG8P0DPA2 414 aa8.88□□□□□ -0.99
UBDP1-202ENST00000457888 SSTR3P32745 418 aaPredicted RBP8.88□□□□□ -0.99
UBDP1-202ENST00000457888 DESI1Q6ICB0 168 aa8.88□□□□□ -0.99
UBDP1-202ENST00000457888 LOC100996750A0A140TA64 210 aa8.87□□□□□ -0.99
UBDP1-202ENST00000457888 SPDYE5A6NIY4 337 aa8.87□□□□□ -0.99
UBDP1-202ENST00000457888 HAP1P54257 671 aaPredicted RBP8.87□□□□□ -0.99
UBDP1-202ENST00000457888 MTMR2Q13614 643 aa8.87□□□□□ -0.99
UBDP1-202ENST00000457888 FAM174AQ8TBP5 190 aa8.87□□□□□ -0.99
UBDP1-202ENST00000457888 KLF16Q9BXK1 252 aaPredicted RBP8.87□□□□□ -0.99
UBDP1-202ENST00000457888 KRTAP4-6Q9BYQ5 205 aa8.87□□□□□ -0.99
UBDP1-202ENST00000457888 CTHP32929 405 aa8.84□□□□□ -0.99
UBDP1-202ENST00000457888 CDK15Q96Q40 435 aa8.83□□□□□ -1
UBDP1-202ENST00000457888 MAN1A2O60476 641 aa8.82□□□□□ -1
UBDP1-202ENST00000457888 ZIC2O95409 532 aaPredicted RBP8.82□□□□□ -1
UBDP1-202ENST00000457888 ARID5BQ14865 1188 aa8.82□□□□□ -1
UBDP1-202ENST00000457888 LYPD8Q6UX82 237 aa8.82□□□□□ -1
UBDP1-202ENST00000457888 TTLL12Q14166 644 aaPredicted RBP8.81□□□□□ -1
UBDP1-202ENST00000457888 FOXJ1Q92949 421 aa8.81□□□□□ -1
UBDP1-202ENST00000457888 ZFAND3Q9H8U3 227 aa8.81□□□□□ -1
UBDP1-202ENST00000457888 C6orf118Q5T5N4 469 aa8.8□□□□□ -1
UBDP1-202ENST00000457888 ITPKCQ96DU7 683 aa8.8□□□□□ -1
UBDP1-202ENST00000457888 PPFIA3O75145 1194 aa8.79□□□□□ -1
UBDP1-202ENST00000457888 NR3C2P08235 984 aa8.79□□□□□ -1
UBDP1-202ENST00000457888 GJA5P36382 358 aa8.79□□□□□ -1
UBDP1-202ENST00000457888 NR5A1Q13285 461 aa8.79□□□□□ -1
UBDP1-202ENST00000457888 KCNMA1Q12791 1236 aa8.78□□□□□ -1
UBDP1-202ENST00000457888 BEGAINQ9BUH8 593 aa8.78□□□□□ -1
UBDP1-202ENST00000457888 MAP10Q9P2G4 905 aa8.78□□□□□ -1
UBDP1-202ENST00000457888 CFAP99D6REC4 459 aa8.77□□□□□ -1.01
UBDP1-202ENST00000457888 UPP2O95045 317 aa8.77□□□□□ -1.01
UBDP1-202ENST00000457888 F12P00748 615 aaPredicted RBP8.77□□□□□ -1.01
UBDP1-202ENST00000457888 BMP2P12643 396 aa8.77□□□□□ -1.01
UBDP1-202ENST00000457888 SUZ12Q15022 739 aaKnown RBP8.77□□□□□ -1.01
UBDP1-202ENST00000457888 RSBN1LQ6PCB5 846 aaPredicted RBP8.77□□□□□ -1.01
UBDP1-202ENST00000457888 GIGYF2Q6Y7W6 1299 aaKnown RBP8.77□□□□□ -1.01
UBDP1-202ENST00000457888 GRM5P41594 1212 aa8.76□□□□□ -1.01
UBDP1-202ENST00000457888 AGERQ15109 404 aa8.76□□□□□ -1.01
UBDP1-202ENST00000457888 AMHR2Q16671 573 aa8.76□□□□□ -1.01
UBDP1-202ENST00000457888 SPTLC1O15269 473 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 DIXDC1Q155Q3 683 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.75□□□□□ -1.01
UBDP1-202ENST00000457888 BPHLQ86WA6 291 aaPredicted RBP8.75□□□□□ -1.01
UBDP1-202ENST00000457888 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 MEIOBQ8N635 442 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 TBC1D2Q9BYX2 928 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 PCDHB15Q9Y5E8 787 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 GSK3AP49840 483 aa8.74□□□□□ -1.01
UBDP1-202ENST00000457888 KCTD17Q8N5Z5 321 aa8.74□□□□□ -1.01
UBDP1-202ENST00000457888 ZBTB3Q9H5J0 574 aa8.74□□□□□ -1.01
UBDP1-202ENST00000457888 HRCP23327 699 aa8.73□□□□□ -1.01
UBDP1-202ENST00000457888 DNMT3LQ9UJW3 386 aa8.73□□□□□ -1.01
UBDP1-202ENST00000457888 SOS2Q07890 1332 aaPredicted RBP8.73□□□□□ -1.01
UBDP1-202ENST00000457888 BARGINQ6ZT62 677 aa8.72□□□□□ -1.01
UBDP1-202ENST00000457888 PRPF38BQ5VTL8 546 aaKnown RBP8.71□□□□□ -1.02
UBDP1-202ENST00000457888 TMEM151AQ8N4L1 468 aa8.71□□□□□ -1.02
UBDP1-202ENST00000457888 PER1O15534 1290 aaPredicted RBP8.69□□□□□ -1.02
UBDP1-202ENST00000457888 FSHRP23945 695 aa8.69□□□□□ -1.02
UBDP1-202ENST00000457888 KRT76Q01546 638 aa8.69□□□□□ -1.02
UBDP1-202ENST00000457888 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.69□□□□□ -1.02
UBDP1-202ENST00000457888 VSIG10Q8N0Z9 540 aa8.69□□□□□ -1.02
UBDP1-202ENST00000457888 CABLES1Q8TDN4 633 aa8.69□□□□□ -1.02
UBDP1-202ENST00000457888 TSEN34Q9BSV6 310 aaKnown RBP8.69□□□□□ -1.02
UBDP1-202ENST00000457888 C1QTNF2Q9BXJ5 285 aa8.69□□□□□ -1.02
UBDP1-202ENST00000457888 ZMYND10O75800 440 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 GDF11O95390 407 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 RASSF7Q02833 373 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 GPR161Q8N6U8 529 aaKnown RBP8.68□□□□□ -1.02
UBDP1-202ENST00000457888 ARMC2Q8NEN0 867 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 CNTNAP3BQ96NU0 1288 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 CNTNAP3Q9BZ76 1288 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 MAP4K5Q9Y4K4 846 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 RNF225M0QZC1 329 aaPredicted RBP8.67□□□□□ -1.02
UBDP1-202ENST00000457888 VASH1Q7L8A9 365 aaPredicted RBP8.67□□□□□ -1.02
UBDP1-202ENST00000457888 SH3RF1Q7Z6J0 888 aa8.67□□□□□ -1.02
UBDP1-202ENST00000457888 ADAMTS8Q9UP79 889 aa8.67□□□□□ -1.02
UBDP1-202ENST00000457888 EMILIN1Q9Y6C2 1016 aa8.67□□□□□ -1.02
UBDP1-202ENST00000457888 TTLL8A6PVC2 850 aa8.66□□□□□ -1.02
UBDP1-202ENST00000457888 CSPP1Q1MSJ5 1256 aa8.66□□□□□ -1.02
UBDP1-202ENST00000457888 NBPF14Q5TI25 921 aa8.66□□□□□ -1.02
UBDP1-202ENST00000457888 PARP9Q8IXQ6 854 aa8.66□□□□□ -1.02
UBDP1-202ENST00000457888 TRMT44Q8IYL2 757 aaKnown RBP8.66□□□□□ -1.02
UBDP1-202ENST00000457888 TSC1Q92574 1164 aa8.66□□□□□ -1.02
UBDP1-202ENST00000457888 PTSQ03393 145 aa8.65□□□□□ -1.02
UBDP1-202ENST00000457888 CCDC116Q8IYX3 515 aa8.65□□□□□ -1.02
UBDP1-202ENST00000457888 SH3BP5LQ7L8J4 393 aa8.64□□□□□ -1.03
UBDP1-202ENST00000457888 COL25A1Q9BXS0 654 aaPredicted RBP8.64□□□□□ -1.03
UBDP1-202ENST00000457888 MAGEB6P1A0A0J9YX57 407 aa8.63□□□□□ -1.03
UBDP1-202ENST00000457888 NANOS1Q8WY41 292 aaKnown RBP8.63□□□□□ -1.03
UBDP1-202ENST00000457888 FIGNL2A6NMB9 653 aa8.62□□□□□ -1.03
UBDP1-202ENST00000457888 NUTM2BA6NNL0 878 aaPredicted RBP8.62□□□□□ -1.03
UBDP1-202ENST00000457888 NUTM2EB1AL46 878 aaPredicted RBP8.62□□□□□ -1.03
UBDP1-202ENST00000457888 NUTM2DQ5VT03 806 aaPredicted RBP8.62□□□□□ -1.03
UBDP1-202ENST00000457888 NUTM2AQ8IVF1 878 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms