RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 BRD4O60885 1362 aaPredicted RBP17.18■□□□□ 0.34
C9orf139-201ENST00000457302 HDGFL2Q7Z4V5 671 aaPredicted RBP17.18■□□□□ 0.34
C9orf139-201ENST00000457302 CABLES1Q8TDN4 633 aa17.17■□□□□ 0.34
C9orf139-201ENST00000457302 TESK2Q96S53 571 aa17.17■□□□□ 0.34
C9orf139-201ENST00000457302 TERF2IPQ9NYB0 399 aa17.17■□□□□ 0.34
C9orf139-201ENST00000457302 LRP6O75581 1613 aa17.17■□□□□ 0.34
C9orf139-201ENST00000457302 COL22A1Q8NFW1 1626 aaPredicted RBP17.17■□□□□ 0.34
C9orf139-201ENST00000457302 AFF2P51816 1311 aa17.17■□□□□ 0.34
C9orf139-201ENST00000457302 TOPAZ1Q8N9V7 1692 aa17.16■□□□□ 0.34
C9orf139-201ENST00000457302 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
C9orf139-201ENST00000457302 RGS17Q9UGC6 210 aaPredicted RBP17.15■□□□□ 0.34
C9orf139-201ENST00000457302 NUTM2GQ5VZR2 741 aa17.14■□□□□ 0.33
C9orf139-201ENST00000457302 SLC12A5Q9H2X9 1139 aa17.14■□□□□ 0.33
C9orf139-201ENST00000457302 USP21Q9UK80 565 aa17.14■□□□□ 0.33
C9orf139-201ENST00000457302 KTN1Q86UP2 1357 aaKnown RBP17.14■□□□□ 0.33
C9orf139-201ENST00000457302 NLRP6P59044 892 aa17.13■□□□□ 0.33
C9orf139-201ENST00000457302 QTRT2Q9H974 415 aaKnown RBP17.13■□□□□ 0.33
C9orf139-201ENST00000457302 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
C9orf139-201ENST00000457302 RXRBP28702 533 aa17.12■□□□□ 0.33
C9orf139-201ENST00000457302 POTEAQ6S8J7 498 aa17.12■□□□□ 0.33
C9orf139-201ENST00000457302 HSPA5P11021 654 aaKnown RBP17.11■□□□□ 0.33
C9orf139-201ENST00000457302 FNBP4Q8N3X1 1017 aaPredicted RBP17.11■□□□□ 0.33
C9orf139-201ENST00000457302 POLR3GLQ9BT43 218 aa17.11■□□□□ 0.33
C9orf139-201ENST00000457302 NINLQ9Y2I6 1382 aa17.11■□□□□ 0.33
C9orf139-201ENST00000457302 USP6P35125 1406 aa17.11■□□□□ 0.33
C9orf139-201ENST00000457302 TRPC5Q9UL62 973 aaPredicted RBP17.1■□□□□ 0.33
C9orf139-201ENST00000457302 TTC21BQ7Z4L5 1316 aa17.1■□□□□ 0.33
C9orf139-201ENST00000457302 TTC21AQ8NDW8 1320 aa17.1■□□□□ 0.33
C9orf139-201ENST00000457302 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
C9orf139-201ENST00000457302 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
C9orf139-201ENST00000457302 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.08■□□□□ 0.32
C9orf139-201ENST00000457302 PRDM11Q9NQV5 511 aa17.08■□□□□ 0.32
C9orf139-201ENST00000457302 ZC3H6P61129 1189 aaKnown RBP17.07■□□□□ 0.32
C9orf139-201ENST00000457302 RBM6P78332 1123 aaKnown RBP17.07■□□□□ 0.32
C9orf139-201ENST00000457302 AKAP12Q02952 1782 aa17.07■□□□□ 0.32
C9orf139-201ENST00000457302 CPSF1Q10570 1443 aaKnown RBP17.06■□□□□ 0.32
C9orf139-201ENST00000457302 FAM83GA6ND36 823 aa17.06■□□□□ 0.32
C9orf139-201ENST00000457302 UNC5CLQ8IV45 518 aa17.06■□□□□ 0.32
C9orf139-201ENST00000457302 KCNH5Q8NCM2 988 aa17.06■□□□□ 0.32
C9orf139-201ENST00000457302 CCDC9Q9Y3X0 531 aaKnown RBP17.06■□□□□ 0.32
C9orf139-201ENST00000457302 GCP02774 474 aa17.05■□□□□ 0.32
C9orf139-201ENST00000457302 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
C9orf139-201ENST00000457302 EVA1CP58658 441 aa17.04■□□□□ 0.32
C9orf139-201ENST00000457302 BTG4Q9NY30 223 aa17.04■□□□□ 0.32
C9orf139-201ENST00000457302 SSH2Q76I76 1423 aa17.02■□□□□ 0.31
C9orf139-201ENST00000457302 GJD4Q96KN9 370 aaPredicted RBP17.01■□□□□ 0.31
C9orf139-201ENST00000457302 EDC4Q6P2E9 1401 aaKnown RBP17.01■□□□□ 0.31
C9orf139-201ENST00000457302 A0A1W2PP64 1363 aa17.01■□□□□ 0.31
C9orf139-201ENST00000457302 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
C9orf139-201ENST00000457302 USP19O94966 1318 aa17■□□□□ 0.31
C9orf139-201ENST00000457302 SOX12O15370 315 aa17■□□□□ 0.31
C9orf139-201ENST00000457302 CHRNA2Q15822 529 aa17■□□□□ 0.31
C9orf139-201ENST00000457302 MON2Q7Z3U7 1717 aa17■□□□□ 0.31
C9orf139-201ENST00000457302 ABCA3Q99758 1704 aa17■□□□□ 0.31
C9orf139-201ENST00000457302 ANKRD36BQ8N2N9 1353 aa17■□□□□ 0.31
C9orf139-201ENST00000457302 NME9Q86XW9 330 aa16.99■□□□□ 0.31
C9orf139-201ENST00000457302 COG3Q96JB2 828 aa16.99■□□□□ 0.31
C9orf139-201ENST00000457302 SLIT2O94813 1529 aa16.99■□□□□ 0.31
C9orf139-201ENST00000457302 COL14A1Q05707 1796 aaKnown RBP16.99■□□□□ 0.31
C9orf139-201ENST00000457302 BCL9LQ86UU0 1499 aa16.99■□□□□ 0.31
C9orf139-201ENST00000457302 VPS72Q15906 364 aa16.98■□□□□ 0.31
C9orf139-201ENST00000457302 STRN4Q9NRL3 753 aa16.98■□□□□ 0.31
C9orf139-201ENST00000457302 NWD2Q9ULI1 1742 aa16.98■□□□□ 0.31
C9orf139-201ENST00000457302 CD163L1Q9NR16 1453 aa16.98■□□□□ 0.31
C9orf139-201ENST00000457302 PHRF1Q9P1Y6 1649 aaKnown RBP16.97■□□□□ 0.31
C9orf139-201ENST00000457302 ATRNO75882 1429 aa16.96■□□□□ 0.31
C9orf139-201ENST00000457302 ZRANB1Q9UGI0 708 aa16.96■□□□□ 0.31
C9orf139-201ENST00000457302 CPDO75976 1380 aa16.96■□□□□ 0.31
C9orf139-201ENST00000457302 USP31Q70CQ4 1352 aa16.96■□□□□ 0.31
C9orf139-201ENST00000457302 CRYBG1Q9Y4K1 1723 aa16.96■□□□□ 0.3
C9orf139-201ENST00000457302 PIK3C2AO00443 1686 aa16.95■□□□□ 0.3
C9orf139-201ENST00000457302 PLCH1Q4KWH8 1693 aa16.95■□□□□ 0.3
C9orf139-201ENST00000457302 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.94■□□□□ 0.3
C9orf139-201ENST00000457302 A0A0G2JS52 829 aa16.94■□□□□ 0.3
C9orf139-201ENST00000457302 MYT1Q01538 1121 aa16.94■□□□□ 0.3
C9orf139-201ENST00000457302 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
C9orf139-201ENST00000457302 CDK12Q9NYV4 1490 aaPredicted RBP16.93■□□□□ 0.3
C9orf139-201ENST00000457302 FYB1O15117 783 aa16.92■□□□□ 0.3
C9orf139-201ENST00000457302 ARHGEF25Q86VW2 580 aa16.92■□□□□ 0.3
C9orf139-201ENST00000457302 GGNBP2Q9H3C7 697 aa16.92■□□□□ 0.3
C9orf139-201ENST00000457302 NRKQ7Z2Y5 1582 aa16.92■□□□□ 0.3
C9orf139-201ENST00000457302 AATKQ6ZMQ8 1374 aa16.91■□□□□ 0.3
C9orf139-201ENST00000457302 CSB-PGBD3P0DP91 1061 aa16.91■□□□□ 0.3
C9orf139-201ENST00000457302 PANK3Q9H999 370 aa16.91■□□□□ 0.3
C9orf139-201ENST00000457302 CGNL1Q0VF96 1302 aa16.91■□□□□ 0.3
C9orf139-201ENST00000457302 SLIT3O75094 1523 aa16.91■□□□□ 0.3
C9orf139-201ENST00000457302 C11orf95C9JLR9 678 aaPredicted RBP16.9■□□□□ 0.3
C9orf139-201ENST00000457302 CARD14Q9BXL6 1004 aa16.9■□□□□ 0.3
C9orf139-201ENST00000457302 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
C9orf139-201ENST00000457302 TOM1L2Q6ZVM7 507 aa16.89■□□□□ 0.29
C9orf139-201ENST00000457302 KNSTRNQ9Y448 316 aa16.89■□□□□ 0.29
C9orf139-201ENST00000457302 SPATA31A5Q5VU36 1347 aa16.89■□□□□ 0.29
C9orf139-201ENST00000457302 SPATA31A7Q8IWB4 1347 aa16.89■□□□□ 0.29
C9orf139-201ENST00000457302 NSD3Q9BZ95 1437 aa16.88■□□□□ 0.29
C9orf139-201ENST00000457302 AMPHP49418 695 aa16.88■□□□□ 0.29
C9orf139-201ENST00000457302 FAM98CQ17RN3 349 aaKnown RBP16.88■□□□□ 0.29
C9orf139-201ENST00000457302 SEPT12Q8IYM1 358 aa16.88■□□□□ 0.29
C9orf139-201ENST00000457302 ONECUT3O60422 494 aaPredicted RBP16.87■□□□□ 0.29
C9orf139-201ENST00000457302 LARP1Q6PKG0 1096 aaKnown RBP16.87■□□□□ 0.29
C9orf139-201ENST00000457302 KIF7Q2M1P5 1343 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms