RNA–Protein interactions for RNA: ENST00000457232.5

HNF4A-206, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-206ENST00000457232 ONECUT3O60422 494 aaPredicted RBP18.53■□□□□ 0.56
HNF4A-206ENST00000457232 NGDNQ8NEJ9 315 aaKnown RBP18.53■□□□□ 0.56
HNF4A-206ENST00000457232 POLR3AO14802 1390 aaPredicted RBP18.52■□□□□ 0.56
HNF4A-206ENST00000457232 SEPT12Q8IYM1 358 aa18.52■□□□□ 0.56
HNF4A-206ENST00000457232 CDK19Q9BWU1 502 aa18.52■□□□□ 0.56
HNF4A-206ENST00000457232 TRPM1Q7Z4N2 1603 aa18.52■□□□□ 0.56
HNF4A-206ENST00000457232 CCDC125Q86Z20 511 aa18.51■□□□□ 0.55
HNF4A-206ENST00000457232 BLMP54132 1417 aaPredicted RBP18.51■□□□□ 0.55
HNF4A-206ENST00000457232 THSD7AQ9UPZ6 1657 aa18.51■□□□□ 0.55
HNF4A-206ENST00000457232 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
HNF4A-206ENST00000457232 BTG4Q9NY30 223 aa18.5■□□□□ 0.55
HNF4A-206ENST00000457232 PAK3O75914 559 aaPredicted RBP18.49■□□□□ 0.55
HNF4A-206ENST00000457232 CCDC9Q9Y3X0 531 aaKnown RBP18.49■□□□□ 0.55
HNF4A-206ENST00000457232 ACEP12821 1306 aa18.48■□□□□ 0.55
HNF4A-206ENST00000457232 PLEKHG3A1L390 1219 aa18.47■□□□□ 0.55
HNF4A-206ENST00000457232 CCDC61Q9Y6R9 512 aa18.47■□□□□ 0.55
HNF4A-206ENST00000457232 KIAA0232Q92628 1395 aa18.46■□□□□ 0.55
HNF4A-206ENST00000457232 LMO7Q8WWI1 1683 aa18.46■□□□□ 0.55
HNF4A-206ENST00000457232 CENPJQ9HC77 1338 aaPredicted RBP18.45■□□□□ 0.54
HNF4A-206ENST00000457232 SRCAPQ6ZRS2 3230 aa18.45■□□□□ 0.54
HNF4A-206ENST00000457232 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
HNF4A-206ENST00000457232 KRT27Q7Z3Y8 459 aa18.45■□□□□ 0.54
HNF4A-206ENST00000457232 L3MBTL2Q969R5 705 aa18.45■□□□□ 0.54
HNF4A-206ENST00000457232 SPATA31A5Q5VU36 1347 aa18.45■□□□□ 0.54
HNF4A-206ENST00000457232 SPATA31A7Q8IWB4 1347 aa18.45■□□□□ 0.54
HNF4A-206ENST00000457232 PPIP5K1Q6PFW1 1433 aa18.44■□□□□ 0.54
HNF4A-206ENST00000457232 FAM98CQ17RN3 349 aaKnown RBP18.44■□□□□ 0.54
HNF4A-206ENST00000457232 PRDM11Q9NQV5 511 aa18.44■□□□□ 0.54
HNF4A-206ENST00000457232 RGPD1P0DJD0 1748 aa18.44■□□□□ 0.54
HNF4A-206ENST00000457232 TNS1Q9HBL0 1735 aaKnown RBP18.43■□□□□ 0.54
HNF4A-206ENST00000457232 NUTM2GQ5VZR2 741 aa18.42■□□□□ 0.54
HNF4A-206ENST00000457232 DEFB132Q7Z7B7 95 aa18.42■□□□□ 0.54
HNF4A-206ENST00000457232 SIN3AQ96ST3 1273 aa18.42■□□□□ 0.54
HNF4A-206ENST00000457232 CHRNA2Q15822 529 aa18.41■□□□□ 0.54
HNF4A-206ENST00000457232 ZRANB1Q9UGI0 708 aa18.41■□□□□ 0.54
HNF4A-206ENST00000457232 USP19O94966 1318 aa18.41■□□□□ 0.54
HNF4A-206ENST00000457232 CAMTA1Q9Y6Y1 1673 aa18.41■□□□□ 0.54
HNF4A-206ENST00000457232 CABP2Q9NPB3 220 aa18.4■□□□□ 0.54
HNF4A-206ENST00000457232 AKAP12Q02952 1782 aa18.39■□□□□ 0.53
HNF4A-206ENST00000457232 PIK3C2AO00443 1686 aa18.39■□□□□ 0.53
HNF4A-206ENST00000457232 A0A0G2JS52 829 aa18.39■□□□□ 0.53
HNF4A-206ENST00000457232 ZC3H6P61129 1189 aaKnown RBP18.39■□□□□ 0.53
HNF4A-206ENST00000457232 SRPK2P78362 688 aaKnown RBP18.39■□□□□ 0.53
HNF4A-206ENST00000457232 MYT1Q01538 1121 aa18.39■□□□□ 0.53
HNF4A-206ENST00000457232 CPDO75976 1380 aa18.38■□□□□ 0.53
HNF4A-206ENST00000457232 SPATA31A1Q5TZJ5 1347 aa18.38■□□□□ 0.53
HNF4A-206ENST00000457232 USP6P35125 1406 aa18.37■□□□□ 0.53
HNF4A-206ENST00000457232 SSH2Q76I76 1423 aa18.37■□□□□ 0.53
HNF4A-206ENST00000457232 SLIT3O75094 1523 aa18.37■□□□□ 0.53
HNF4A-206ENST00000457232 ABTB2Q8N961 1025 aa18.36■□□□□ 0.53
HNF4A-206ENST00000457232 BRD4O60885 1362 aaPredicted RBP18.35■□□□□ 0.53
HNF4A-206ENST00000457232 FAM182BQ5T319 152 aa18.35■□□□□ 0.53
HNF4A-206ENST00000457232 COL18A1P39060 1754 aa18.34■□□□□ 0.53
HNF4A-206ENST00000457232 SF3B2Q13435 895 aaKnown RBP18.34■□□□□ 0.53
HNF4A-206ENST00000457232 STRN4Q9NRL3 753 aa18.34■□□□□ 0.53
HNF4A-206ENST00000457232 PARP4Q9UKK3 1724 aaKnown RBP18.34■□□□□ 0.53
HNF4A-206ENST00000457232 CABP1Q9NZU7 370 aa18.33■□□□□ 0.53
HNF4A-206ENST00000457232 ROCK2O75116 1388 aaKnown RBP18.33■□□□□ 0.52
HNF4A-206ENST00000457232 COL5A2P05997 1499 aaPredicted RBP18.32■□□□□ 0.52
HNF4A-206ENST00000457232 DISP2A7MBM2 1401 aa18.32■□□□□ 0.52
HNF4A-206ENST00000457232 NEUROD1Q13562 356 aa18.32■□□□□ 0.52
HNF4A-206ENST00000457232 MON2Q7Z3U7 1717 aa18.32■□□□□ 0.52
HNF4A-206ENST00000457232 WNK3Q9BYP7 1800 aa18.32■□□□□ 0.52
HNF4A-206ENST00000457232 LRP5O75197 1615 aa18.32■□□□□ 0.52
HNF4A-206ENST00000457232 GCP02774 474 aa18.31■□□□□ 0.52
HNF4A-206ENST00000457232 NLRP13Q86W25 1043 aa18.31■□□□□ 0.52
HNF4A-206ENST00000457232 LARP1Q6PKG0 1096 aaKnown RBP18.3■□□□□ 0.52
HNF4A-206ENST00000457232 EVC2Q86UK5 1308 aa18.3■□□□□ 0.52
HNF4A-206ENST00000457232 RGPD5Q99666 1765 aa18.3■□□□□ 0.52
HNF4A-206ENST00000457232 BAG6P46379 1132 aa18.29■□□□□ 0.52
HNF4A-206ENST00000457232 BARGINQ6ZT62 677 aa18.28■□□□□ 0.52
HNF4A-206ENST00000457232 USP35Q9P2H5 1018 aa18.28■□□□□ 0.52
HNF4A-206ENST00000457232 RREB1Q92766 1687 aa18.28■□□□□ 0.52
HNF4A-206ENST00000457232 LRRC37A3O60309 1634 aa18.28■□□□□ 0.52
HNF4A-206ENST00000457232 CPSF1Q10570 1443 aaKnown RBP18.27■□□□□ 0.52
HNF4A-206ENST00000457232 USP54Q70EL1 1684 aa18.27■□□□□ 0.51
HNF4A-206ENST00000457232 SBNO2Q9Y2G9 1366 aa18.27■□□□□ 0.51
HNF4A-206ENST00000457232 PEAK1Q9H792 1746 aa18.26■□□□□ 0.51
HNF4A-206ENST00000457232 EVA1CP58658 441 aa18.26■□□□□ 0.51
HNF4A-206ENST00000457232 EN1Q05925 392 aaPredicted RBP18.26■□□□□ 0.51
HNF4A-206ENST00000457232 AATKQ6ZMQ8 1374 aa18.26■□□□□ 0.51
HNF4A-206ENST00000457232 NLRP6P59044 892 aa18.25■□□□□ 0.51
HNF4A-206ENST00000457232 CRB1P82279 1406 aa18.25■□□□□ 0.51
HNF4A-206ENST00000457232 NFAT5O94916 1531 aa18.25■□□□□ 0.51
HNF4A-206ENST00000457232 TRIM26Q12899 539 aaPredicted RBP18.24■□□□□ 0.51
HNF4A-206ENST00000457232 TCP11L2Q8N4U5 519 aa18.24■□□□□ 0.51
HNF4A-206ENST00000457232 NUP188Q5SRE5 1749 aa18.24■□□□□ 0.51
HNF4A-206ENST00000457232 SBF2Q86WG5 1849 aa18.24■□□□□ 0.51
HNF4A-206ENST00000457232 TTC21BQ7Z4L5 1316 aa18.23■□□□□ 0.51
HNF4A-206ENST00000457232 FAM196AQ6ZSG2 479 aa18.23■□□□□ 0.51
HNF4A-206ENST00000457232 CD163L1Q9NR16 1453 aa18.22■□□□□ 0.51
HNF4A-206ENST00000457232 PSDA5PKW4 1024 aaPredicted RBP18.22■□□□□ 0.51
HNF4A-206ENST00000457232 TRIM37O94972 964 aa18.22■□□□□ 0.51
HNF4A-206ENST00000457232 PCGF6Q9BYE7 350 aa18.22■□□□□ 0.51
HNF4A-206ENST00000457232 THRAP3Q9Y2W1 955 aaKnown RBP18.22■□□□□ 0.51
HNF4A-206ENST00000457232 EZH2Q15910 746 aaKnown RBP18.21■□□□□ 0.51
HNF4A-206ENST00000457232 ZNF692Q9BU19 519 aaPredicted RBP18.21■□□□□ 0.51
HNF4A-206ENST00000457232 ZBTB7CA1YPR0 619 aa18.2■□□□□ 0.5
HNF4A-206ENST00000457232 CAMKK2Q96RR4 588 aa18.2■□□□□ 0.5
HNF4A-206ENST00000457232 AXIN2Q9Y2T1 843 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms