RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 NRKQ7Z2Y5 1582 aa19.7■□□□□ 0.74
SMPD4-215ENST00000457039 A0A1W2PP64 1363 aa19.7■□□□□ 0.74
SMPD4-215ENST00000457039 ARHGEF10O15013 1369 aa19.7■□□□□ 0.74
SMPD4-215ENST00000457039 LRP6O75581 1613 aa19.68■□□□□ 0.74
SMPD4-215ENST00000457039 KTN1Q86UP2 1357 aaKnown RBP19.68■□□□□ 0.74
SMPD4-215ENST00000457039 ANKRD36BQ8N2N9 1353 aa19.68■□□□□ 0.74
SMPD4-215ENST00000457039 TERF2IPQ9NYB0 399 aa19.67■□□□□ 0.74
SMPD4-215ENST00000457039 PAK3O75914 559 aaPredicted RBP19.66■□□□□ 0.74
SMPD4-215ENST00000457039 HDGFL2Q7Z4V5 671 aaPredicted RBP19.66■□□□□ 0.74
SMPD4-215ENST00000457039 KIF7Q2M1P5 1343 aa19.66■□□□□ 0.74
SMPD4-215ENST00000457039 MED1Q15648 1581 aaPredicted RBP19.66■□□□□ 0.74
SMPD4-215ENST00000457039 TTC21BQ7Z4L5 1316 aa19.65■□□□□ 0.74
SMPD4-215ENST00000457039 EDC4Q6P2E9 1401 aaKnown RBP19.64■□□□□ 0.73
SMPD4-215ENST00000457039 CRYBG1Q9Y4K1 1723 aa19.63■□□□□ 0.73
SMPD4-215ENST00000457039 TTC21AQ8NDW8 1320 aa19.63■□□□□ 0.73
SMPD4-215ENST00000457039 LMOD2Q6P5Q4 547 aa19.63■□□□□ 0.73
SMPD4-215ENST00000457039 ABCA3Q99758 1704 aa19.62■□□□□ 0.73
SMPD4-215ENST00000457039 PIK3C2AO00443 1686 aa19.62■□□□□ 0.73
SMPD4-215ENST00000457039 ABTB2Q8N961 1025 aa19.62■□□□□ 0.73
SMPD4-215ENST00000457039 POLR3GLQ9BT43 218 aa19.62■□□□□ 0.73
SMPD4-215ENST00000457039 CCDC7Q96M83 1385 aa19.61■□□□□ 0.73
SMPD4-215ENST00000457039 WASHC2AQ641Q2 1341 aa19.6■□□□□ 0.73
SMPD4-215ENST00000457039 NUTM2BA6NNL0 878 aaPredicted RBP19.6■□□□□ 0.73
SMPD4-215ENST00000457039 NUTM2EB1AL46 878 aaPredicted RBP19.6■□□□□ 0.73
SMPD4-215ENST00000457039 NUTM2AQ8IVF1 878 aaPredicted RBP19.6■□□□□ 0.73
SMPD4-215ENST00000457039 CABLES1Q8TDN4 633 aa19.6■□□□□ 0.73
SMPD4-215ENST00000457039 USP19O94966 1318 aa19.59■□□□□ 0.73
SMPD4-215ENST00000457039 NUTM2GQ5VZR2 741 aa19.59■□□□□ 0.73
SMPD4-215ENST00000457039 CARD14Q9BXL6 1004 aa19.58■□□□□ 0.72
SMPD4-215ENST00000457039 MARF1Q9Y4F3 1742 aaKnown RBP19.58■□□□□ 0.72
SMPD4-215ENST00000457039 USP54Q70EL1 1684 aa19.58■□□□□ 0.72
SMPD4-215ENST00000457039 PHRF1Q9P1Y6 1649 aaKnown RBP19.58■□□□□ 0.72
SMPD4-215ENST00000457039 USP31Q70CQ4 1352 aa19.57■□□□□ 0.72
SMPD4-215ENST00000457039 NLRP13Q86W25 1043 aa19.57■□□□□ 0.72
SMPD4-215ENST00000457039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.57■□□□□ 0.72
SMPD4-215ENST00000457039 SLIT3O75094 1523 aa19.56■□□□□ 0.72
SMPD4-215ENST00000457039 NME9Q86XW9 330 aa19.56■□□□□ 0.72
SMPD4-215ENST00000457039 NLRP6P59044 892 aa19.55■□□□□ 0.72
SMPD4-215ENST00000457039 NSD3Q9BZ95 1437 aa19.55■□□□□ 0.72
SMPD4-215ENST00000457039 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
SMPD4-215ENST00000457039 ADAMTS2O95450 1211 aa19.54■□□□□ 0.72
SMPD4-215ENST00000457039 PANK3Q9H999 370 aa19.54■□□□□ 0.72
SMPD4-215ENST00000457039 ZRANB1Q9UGI0 708 aa19.54■□□□□ 0.72
SMPD4-215ENST00000457039 OVOS2A0A0J9YW53 1432 aa19.53■□□□□ 0.72
SMPD4-215ENST00000457039 OVOS2Q6IE36 1432 aa19.53■□□□□ 0.72
SMPD4-215ENST00000457039 MEX3CQ5U5Q3 659 aaKnown RBP19.52■□□□□ 0.72
SMPD4-215ENST00000457039 FYB1O15117 783 aa19.51■□□□□ 0.71
SMPD4-215ENST00000457039 GCP02774 474 aa19.51■□□□□ 0.71
SMPD4-215ENST00000457039 HAP1P54257 671 aaPredicted RBP19.51■□□□□ 0.71
SMPD4-215ENST00000457039 C8orf37Q96NL8 207 aa19.5■□□□□ 0.71
SMPD4-215ENST00000457039 RGS17Q9UGC6 210 aaPredicted RBP19.5■□□□□ 0.71
SMPD4-215ENST00000457039 CPDO75976 1380 aa19.49■□□□□ 0.71
SMPD4-215ENST00000457039 NFAT5O94916 1531 aa19.49■□□□□ 0.71
SMPD4-215ENST00000457039 KIAA0232Q92628 1395 aa19.48■□□□□ 0.71
SMPD4-215ENST00000457039 SLIT2O94813 1529 aa19.48■□□□□ 0.71
SMPD4-215ENST00000457039 FNBP4Q8N3X1 1017 aaPredicted RBP19.48■□□□□ 0.71
SMPD4-215ENST00000457039 KIF20BQ96Q89 1820 aa19.48■□□□□ 0.71
SMPD4-215ENST00000457039 FAM83GA6ND36 823 aa19.47■□□□□ 0.71
SMPD4-215ENST00000457039 KCNH5Q8NCM2 988 aa19.47■□□□□ 0.71
SMPD4-215ENST00000457039 AFF2P51816 1311 aa19.47■□□□□ 0.71
SMPD4-215ENST00000457039 PER1O15534 1290 aaPredicted RBP19.46■□□□□ 0.71
SMPD4-215ENST00000457039 ZC3H6P61129 1189 aaKnown RBP19.46■□□□□ 0.71
SMPD4-215ENST00000457039 NGLY1Q96IV0 654 aa19.46■□□□□ 0.71
SMPD4-215ENST00000457039 GGNBP2Q9H3C7 697 aa19.46■□□□□ 0.71
SMPD4-215ENST00000457039 COL14A1Q05707 1796 aaKnown RBP19.46■□□□□ 0.71
SMPD4-215ENST00000457039 CGNL1Q0VF96 1302 aa19.46■□□□□ 0.71
SMPD4-215ENST00000457039 COG3Q96JB2 828 aa19.45■□□□□ 0.7
SMPD4-215ENST00000457039 PHF23Q9BUL5 403 aaPredicted RBP19.45■□□□□ 0.7
SMPD4-215ENST00000457039 BCL9LQ86UU0 1499 aa19.45■□□□□ 0.7
SMPD4-215ENST00000457039 PLCH1Q4KWH8 1693 aa19.44■□□□□ 0.7
SMPD4-215ENST00000457039 PRDM11Q9NQV5 511 aa19.44■□□□□ 0.7
SMPD4-215ENST00000457039 ARHGEF25Q86VW2 580 aa19.43■□□□□ 0.7
SMPD4-215ENST00000457039 LMO7Q8WWI1 1683 aa19.43■□□□□ 0.7
SMPD4-215ENST00000457039 NWD2Q9ULI1 1742 aa19.42■□□□□ 0.7
SMPD4-215ENST00000457039 AMER1Q5JTC6 1135 aaPredicted RBP19.42■□□□□ 0.7
SMPD4-215ENST00000457039 NSD2O96028 1365 aa19.42■□□□□ 0.7
SMPD4-215ENST00000457039 SOX12O15370 315 aa19.41■□□□□ 0.7
SMPD4-215ENST00000457039 CHRNA2Q15822 529 aa19.41■□□□□ 0.7
SMPD4-215ENST00000457039 ZNF772Q68DY9 489 aaPredicted RBP19.41■□□□□ 0.7
SMPD4-215ENST00000457039 USP21Q9UK80 565 aa19.41■□□□□ 0.7
SMPD4-215ENST00000457039 KNSTRNQ9Y448 316 aa19.41■□□□□ 0.7
SMPD4-215ENST00000457039 NRAPQ86VF7 1730 aa19.41■□□□□ 0.7
SMPD4-215ENST00000457039 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.41■□□□□ 0.7
SMPD4-215ENST00000457039 ANKRD26Q9UPS8 1709 aa19.41■□□□□ 0.7
SMPD4-215ENST00000457039 COL18A1P39060 1754 aa19.41■□□□□ 0.7
SMPD4-215ENST00000457039 AATKQ6ZMQ8 1374 aa19.41■□□□□ 0.7
SMPD4-215ENST00000457039 POTEAQ6S8J7 498 aa19.39■□□□□ 0.69
SMPD4-215ENST00000457039 UNC5CLQ8IV45 518 aa19.39■□□□□ 0.69
SMPD4-215ENST00000457039 BTG4Q9NY30 223 aa19.39■□□□□ 0.69
SMPD4-215ENST00000457039 ABCC6O95255 1503 aa19.39■□□□□ 0.69
SMPD4-215ENST00000457039 CAMTA1Q9Y6Y1 1673 aa19.39■□□□□ 0.69
SMPD4-215ENST00000457039 ATRNO75882 1429 aa19.38■□□□□ 0.69
SMPD4-215ENST00000457039 NPC1L1Q9UHC9 1359 aa19.37■□□□□ 0.69
SMPD4-215ENST00000457039 FBLN1P23142 703 aa19.37■□□□□ 0.69
SMPD4-215ENST00000457039 LTN1O94822 1766 aa19.37■□□□□ 0.69
SMPD4-215ENST00000457039 MAP3K19Q56UN5 1328 aa19.35■□□□□ 0.69
SMPD4-215ENST00000457039 QTRT2Q9H974 415 aaKnown RBP19.35■□□□□ 0.69
SMPD4-215ENST00000457039 TRPC5Q9UL62 973 aaPredicted RBP19.35■□□□□ 0.69
SMPD4-215ENST00000457039 AXIN2Q9Y2T1 843 aa19.35■□□□□ 0.69
SMPD4-215ENST00000457039 COL5A2P05997 1499 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms