RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 ZNF692Q9BU19 519 aaPredicted RBP22.31■■□□□ 1.16
PKNOX1-204ENST00000456957 CARD14Q9BXL6 1004 aa22.31■■□□□ 1.16
PKNOX1-204ENST00000456957 COL16A1Q07092 1604 aaPredicted RBP22.31■■□□□ 1.16
PKNOX1-204ENST00000456957 EDC4Q6P2E9 1401 aaKnown RBP22.31■■□□□ 1.16
PKNOX1-204ENST00000456957 SSH2Q76I76 1423 aa22.31■■□□□ 1.16
PKNOX1-204ENST00000456957 PIK3C2AO00443 1686 aa22.3■■□□□ 1.16
PKNOX1-204ENST00000456957 XPCQ01831 940 aaPredicted RBP22.3■■□□□ 1.16
PKNOX1-204ENST00000456957 PSME1Q06323 249 aa22.3■■□□□ 1.16
PKNOX1-204ENST00000456957 ANKRD26Q9UPS8 1709 aa22.28■■□□□ 1.16
PKNOX1-204ENST00000456957 KRT28Q7Z3Y7 464 aa22.28■■□□□ 1.16
PKNOX1-204ENST00000456957 MARF1Q9Y4F3 1742 aaKnown RBP22.28■■□□□ 1.16
PKNOX1-204ENST00000456957 SOS2Q07890 1332 aaPredicted RBP22.27■■□□□ 1.16
PKNOX1-204ENST00000456957 USP54Q70EL1 1684 aa22.26■■□□□ 1.15
PKNOX1-204ENST00000456957 BRD4O60885 1362 aaPredicted RBP22.26■■□□□ 1.15
PKNOX1-204ENST00000456957 PER1O15534 1290 aaPredicted RBP22.25■■□□□ 1.15
PKNOX1-204ENST00000456957 TTC21BQ7Z4L5 1316 aa22.25■■□□□ 1.15
PKNOX1-204ENST00000456957 SBNO1A3KN83 1393 aa22.25■■□□□ 1.15
PKNOX1-204ENST00000456957 TNS3Q68CZ2 1445 aa22.23■■□□□ 1.15
PKNOX1-204ENST00000456957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.23■■□□□ 1.15
PKNOX1-204ENST00000456957 TTC21AQ8NDW8 1320 aa22.22■■□□□ 1.15
PKNOX1-204ENST00000456957 CRYBG1Q9Y4K1 1723 aa22.22■■□□□ 1.15
PKNOX1-204ENST00000456957 PAK3O75914 559 aaPredicted RBP22.21■■□□□ 1.15
PKNOX1-204ENST00000456957 KNSTRNQ9Y448 316 aa22.21■■□□□ 1.15
PKNOX1-204ENST00000456957 ABCA3Q99758 1704 aa22.2■■□□□ 1.14
PKNOX1-204ENST00000456957 SPATA31A3Q5VYP0 1347 aa22.2■■□□□ 1.14
PKNOX1-204ENST00000456957 NME9Q86XW9 330 aa22.19■■□□□ 1.14
PKNOX1-204ENST00000456957 CGNL1Q0VF96 1302 aa22.19■■□□□ 1.14
PKNOX1-204ENST00000456957 COL22A1Q8NFW1 1626 aaPredicted RBP22.19■■□□□ 1.14
PKNOX1-204ENST00000456957 SHPRHQ149N8 1683 aa22.18■■□□□ 1.14
PKNOX1-204ENST00000456957 PHRF1Q9P1Y6 1649 aaKnown RBP22.18■■□□□ 1.14
PKNOX1-204ENST00000456957 MED1Q15648 1581 aaPredicted RBP22.18■■□□□ 1.14
PKNOX1-204ENST00000456957 AMER1Q5JTC6 1135 aaPredicted RBP22.18■■□□□ 1.14
PKNOX1-204ENST00000456957 OVOS2A0A0J9YW53 1432 aa22.16■■□□□ 1.14
PKNOX1-204ENST00000456957 OVOS2Q6IE36 1432 aa22.16■■□□□ 1.14
PKNOX1-204ENST00000456957 FYB1O15117 783 aa22.16■■□□□ 1.14
PKNOX1-204ENST00000456957 ARHGEF10O15013 1369 aa22.15■■□□□ 1.14
PKNOX1-204ENST00000456957 NSD2O96028 1365 aa22.15■■□□□ 1.14
PKNOX1-204ENST00000456957 USP31Q70CQ4 1352 aa22.15■■□□□ 1.14
PKNOX1-204ENST00000456957 NPC1L1Q9UHC9 1359 aa22.15■■□□□ 1.14
PKNOX1-204ENST00000456957 ABTB2Q8N961 1025 aa22.15■■□□□ 1.14
PKNOX1-204ENST00000456957 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
PKNOX1-204ENST00000456957 ZRANB1Q9UGI0 708 aa22.15■■□□□ 1.14
PKNOX1-204ENST00000456957 NUTM2GQ5VZR2 741 aa22.14■■□□□ 1.13
PKNOX1-204ENST00000456957 LMOD2Q6P5Q4 547 aa22.14■■□□□ 1.13
PKNOX1-204ENST00000456957 LRRC59Q96AG4 307 aaKnown RBP22.14■■□□□ 1.13
PKNOX1-204ENST00000456957 GGNBP2Q9H3C7 697 aa22.14■■□□□ 1.13
PKNOX1-204ENST00000456957 SLIT3O75094 1523 aa22.13■■□□□ 1.13
PKNOX1-204ENST00000456957 PNPLA6Q8IY17 1366 aa22.12■■□□□ 1.13
PKNOX1-204ENST00000456957 NLRP6P59044 892 aa22.11■■□□□ 1.13
PKNOX1-204ENST00000456957 CC2D1BQ5T0F9 858 aaKnown RBP22.11■■□□□ 1.13
PKNOX1-204ENST00000456957 CNGB1Q14028 1251 aaPredicted RBP22.1■■□□□ 1.13
PKNOX1-204ENST00000456957 USP19O94966 1318 aa22.09■■□□□ 1.13
PKNOX1-204ENST00000456957 COG3Q96JB2 828 aa22.09■■□□□ 1.13
PKNOX1-204ENST00000456957 LTN1O94822 1766 aa22.09■■□□□ 1.13
PKNOX1-204ENST00000456957 NFAT5O94916 1531 aa22.08■■□□□ 1.13
PKNOX1-204ENST00000456957 NLRP13Q86W25 1043 aa22.08■■□□□ 1.13
PKNOX1-204ENST00000456957 MAP2P11137 1827 aaKnown RBP22.07■■□□□ 1.12
PKNOX1-204ENST00000456957 JCADQ9P266 1359 aa22.07■■□□□ 1.12
PKNOX1-204ENST00000456957 PLEKHG5O94827 1062 aa22.06■■□□□ 1.12
PKNOX1-204ENST00000456957 PARD3Q8TEW0 1356 aa22.05■■□□□ 1.12
PKNOX1-204ENST00000456957 DIEXFQ68CQ4 756 aaKnown RBP22.05■■□□□ 1.12
PKNOX1-204ENST00000456957 MORC1Q86VD1 984 aa22.05■■□□□ 1.12
PKNOX1-204ENST00000456957 CABLES1Q8TDN4 633 aa22.04■■□□□ 1.12
PKNOX1-204ENST00000456957 SOX12O15370 315 aa22.01■■□□□ 1.11
PKNOX1-204ENST00000456957 PEAK1Q9H792 1746 aa22■■□□□ 1.11
PKNOX1-204ENST00000456957 TNNT2P45379 298 aaPredicted RBP22■■□□□ 1.11
PKNOX1-204ENST00000456957 PRKRIP1Q9H875 184 aaPredicted RBP22■■□□□ 1.11
PKNOX1-204ENST00000456957 GCP02774 474 aa21.99■■□□□ 1.11
PKNOX1-204ENST00000456957 FBLN1P23142 703 aa21.99■■□□□ 1.11
PKNOX1-204ENST00000456957 KCNH5Q8NCM2 988 aa21.99■■□□□ 1.11
PKNOX1-204ENST00000456957 AATKQ6ZMQ8 1374 aa21.99■■□□□ 1.11
PKNOX1-204ENST00000456957 RALBP1Q15311 655 aa21.98■■□□□ 1.11
PKNOX1-204ENST00000456957 COL18A1P39060 1754 aa21.97■■□□□ 1.11
PKNOX1-204ENST00000456957 RGPD5Q99666 1765 aa21.97■■□□□ 1.11
PKNOX1-204ENST00000456957 ANP32CO43423 234 aa21.97■■□□□ 1.11
PKNOX1-204ENST00000456957 LRP6O75581 1613 aa21.97■■□□□ 1.11
PKNOX1-204ENST00000456957 HAP1P54257 671 aaPredicted RBP21.96■■□□□ 1.11
PKNOX1-204ENST00000456957 SPATA31A6Q5VVP1 1343 aa21.96■■□□□ 1.11
PKNOX1-204ENST00000456957 SMG6Q86US8 1419 aaKnown RBP21.96■■□□□ 1.11
PKNOX1-204ENST00000456957 PLCH1Q4KWH8 1693 aa21.95■■□□□ 1.1
PKNOX1-204ENST00000456957 COL14A1Q05707 1796 aaKnown RBP21.94■■□□□ 1.1
PKNOX1-204ENST00000456957 PPP2R1AP30153 589 aa21.94■■□□□ 1.1
PKNOX1-204ENST00000456957 RRS1Q15050 365 aaKnown RBP21.94■■□□□ 1.1
PKNOX1-204ENST00000456957 CPDO75976 1380 aa21.94■■□□□ 1.1
PKNOX1-204ENST00000456957 LMO7Q8WWI1 1683 aa21.94■■□□□ 1.1
PKNOX1-204ENST00000456957 NUTM2BA6NNL0 878 aaPredicted RBP21.93■■□□□ 1.1
PKNOX1-204ENST00000456957 NUTM2EB1AL46 878 aaPredicted RBP21.93■■□□□ 1.1
PKNOX1-204ENST00000456957 ZC3H6P61129 1189 aaKnown RBP21.93■■□□□ 1.1
PKNOX1-204ENST00000456957 MAP3K19Q56UN5 1328 aa21.93■■□□□ 1.1
PKNOX1-204ENST00000456957 NUTM2AQ8IVF1 878 aaPredicted RBP21.93■■□□□ 1.1
PKNOX1-204ENST00000456957 KIAA0232Q92628 1395 aa21.93■■□□□ 1.1
PKNOX1-204ENST00000456957 ABCC6O95255 1503 aa21.92■■□□□ 1.1
PKNOX1-204ENST00000456957 MYBBP1AQ9BQG0 1328 aaKnown RBP21.92■■□□□ 1.1
PKNOX1-204ENST00000456957 EMILIN1Q9Y6C2 1016 aa21.92■■□□□ 1.1
PKNOX1-204ENST00000456957 ARHGEF25Q86VW2 580 aa21.91■■□□□ 1.1
PKNOX1-204ENST00000456957 POLKQ9UBT6 870 aa21.91■■□□□ 1.1
PKNOX1-204ENST00000456957 CDK12Q9NYV4 1490 aaPredicted RBP21.9■■□□□ 1.1
PKNOX1-204ENST00000456957 RTL1A6NKG5 1358 aa21.89■■□□□ 1.1
PKNOX1-204ENST00000456957 ZBTB7CA1YPR0 619 aa21.89■■□□□ 1.09
PKNOX1-204ENST00000456957 RGS17Q9UGC6 210 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms