RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 SSH2Q76I76 1423 aa19.56■□□□□ 0.72
TIMP1-205ENST00000456754 KTN1Q86UP2 1357 aaKnown RBP19.56■□□□□ 0.72
TIMP1-205ENST00000456754 LMOD2Q6P5Q4 547 aa19.55■□□□□ 0.72
TIMP1-205ENST00000456754 LRRC59Q96AG4 307 aaKnown RBP19.55■□□□□ 0.72
TIMP1-205ENST00000456754 SBNO1A3KN83 1393 aa19.55■□□□□ 0.72
TIMP1-205ENST00000456754 JCADQ9P266 1359 aa19.54■□□□□ 0.72
TIMP1-205ENST00000456754 PIK3C2AO00443 1686 aa19.53■□□□□ 0.72
TIMP1-205ENST00000456754 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.53■□□□□ 0.72
TIMP1-205ENST00000456754 CABLES1Q8TDN4 633 aa19.53■□□□□ 0.72
TIMP1-205ENST00000456754 CARD14Q9BXL6 1004 aa19.53■□□□□ 0.72
TIMP1-205ENST00000456754 ZRANB1Q9UGI0 708 aa19.53■□□□□ 0.72
TIMP1-205ENST00000456754 ANKRD36BQ8N2N9 1353 aa19.53■□□□□ 0.72
TIMP1-205ENST00000456754 NINLQ9Y2I6 1382 aa19.53■□□□□ 0.72
TIMP1-205ENST00000456754 MARF1Q9Y4F3 1742 aaKnown RBP19.52■□□□□ 0.72
TIMP1-205ENST00000456754 HDGFL2Q7Z4V5 671 aaPredicted RBP19.52■□□□□ 0.72
TIMP1-205ENST00000456754 TTC21BQ7Z4L5 1316 aa19.51■□□□□ 0.71
TIMP1-205ENST00000456754 LRP6O75581 1613 aa19.51■□□□□ 0.71
TIMP1-205ENST00000456754 COL22A1Q8NFW1 1626 aaPredicted RBP19.51■□□□□ 0.71
TIMP1-205ENST00000456754 ABCA3Q99758 1704 aa19.51■□□□□ 0.71
TIMP1-205ENST00000456754 TERF2IPQ9NYB0 399 aa19.51■□□□□ 0.71
TIMP1-205ENST00000456754 CRYBG1Q9Y4K1 1723 aa19.51■□□□□ 0.71
TIMP1-205ENST00000456754 MED1Q15648 1581 aaPredicted RBP19.5■□□□□ 0.71
TIMP1-205ENST00000456754 NUTM2BA6NNL0 878 aaPredicted RBP19.5■□□□□ 0.71
TIMP1-205ENST00000456754 NUTM2EB1AL46 878 aaPredicted RBP19.5■□□□□ 0.71
TIMP1-205ENST00000456754 NME9Q86XW9 330 aa19.5■□□□□ 0.71
TIMP1-205ENST00000456754 NUTM2AQ8IVF1 878 aaPredicted RBP19.5■□□□□ 0.71
TIMP1-205ENST00000456754 ZNF692Q9BU19 519 aaPredicted RBP19.5■□□□□ 0.71
TIMP1-205ENST00000456754 PANK3Q9H999 370 aa19.49■□□□□ 0.71
TIMP1-205ENST00000456754 ABTB2Q8N961 1025 aa19.48■□□□□ 0.71
TIMP1-205ENST00000456754 EDC4Q6P2E9 1401 aaKnown RBP19.48■□□□□ 0.71
TIMP1-205ENST00000456754 NSD3Q9BZ95 1437 aa19.48■□□□□ 0.71
TIMP1-205ENST00000456754 PHRF1Q9P1Y6 1649 aaKnown RBP19.46■□□□□ 0.71
TIMP1-205ENST00000456754 ARHGEF10O15013 1369 aa19.45■□□□□ 0.7
TIMP1-205ENST00000456754 KIF20BQ96Q89 1820 aa19.44■□□□□ 0.7
TIMP1-205ENST00000456754 ADAMTS2O95450 1211 aa19.43■□□□□ 0.7
TIMP1-205ENST00000456754 NLRP6P59044 892 aa19.43■□□□□ 0.7
TIMP1-205ENST00000456754 TTC21AQ8NDW8 1320 aa19.43■□□□□ 0.7
TIMP1-205ENST00000456754 BRD4O60885 1362 aaPredicted RBP19.43■□□□□ 0.7
TIMP1-205ENST00000456754 SPATA31A6Q5VVP1 1343 aa19.42■□□□□ 0.7
TIMP1-205ENST00000456754 SOX12O15370 315 aa19.41■□□□□ 0.7
TIMP1-205ENST00000456754 GGNBP2Q9H3C7 697 aa19.41■□□□□ 0.7
TIMP1-205ENST00000456754 USP54Q70EL1 1684 aa19.4■□□□□ 0.7
TIMP1-205ENST00000456754 FYB1O15117 783 aa19.4■□□□□ 0.7
TIMP1-205ENST00000456754 USP19O94966 1318 aa19.4■□□□□ 0.7
TIMP1-205ENST00000456754 FBLN1P23142 703 aa19.39■□□□□ 0.69
TIMP1-205ENST00000456754 OVOS2A0A0J9YW53 1432 aa19.39■□□□□ 0.69
TIMP1-205ENST00000456754 OVOS2Q6IE36 1432 aa19.39■□□□□ 0.69
TIMP1-205ENST00000456754 SLIT3O75094 1523 aa19.39■□□□□ 0.69
TIMP1-205ENST00000456754 USP31Q70CQ4 1352 aa19.38■□□□□ 0.69
TIMP1-205ENST00000456754 NLRP13Q86W25 1043 aa19.38■□□□□ 0.69
TIMP1-205ENST00000456754 ZNF316A6NFI3 1004 aaPredicted RBP19.37■□□□□ 0.69
TIMP1-205ENST00000456754 PER1O15534 1290 aaPredicted RBP19.37■□□□□ 0.69
TIMP1-205ENST00000456754 HAP1P54257 671 aaPredicted RBP19.37■□□□□ 0.69
TIMP1-205ENST00000456754 CNGB1Q14028 1251 aaPredicted RBP19.37■□□□□ 0.69
TIMP1-205ENST00000456754 ZC3H6P61129 1189 aaKnown RBP19.36■□□□□ 0.69
TIMP1-205ENST00000456754 DDX10Q13206 875 aaKnown RBP19.36■□□□□ 0.69
TIMP1-205ENST00000456754 NFAT5O94916 1531 aa19.35■□□□□ 0.69
TIMP1-205ENST00000456754 GCP02774 474 aa19.35■□□□□ 0.69
TIMP1-205ENST00000456754 ZBTB7CA1YPR0 619 aa19.34■□□□□ 0.69
TIMP1-205ENST00000456754 CHRNA2Q15822 529 aa19.34■□□□□ 0.69
TIMP1-205ENST00000456754 MEX3CQ5U5Q3 659 aaKnown RBP19.34■□□□□ 0.69
TIMP1-205ENST00000456754 C8orf37Q96NL8 207 aa19.34■□□□□ 0.69
TIMP1-205ENST00000456754 ANKRD26Q9UPS8 1709 aa19.34■□□□□ 0.69
TIMP1-205ENST00000456754 KIAA0232Q92628 1395 aa19.33■□□□□ 0.69
TIMP1-205ENST00000456754 AMER1Q5JTC6 1135 aaPredicted RBP19.33■□□□□ 0.68
TIMP1-205ENST00000456754 CGNL1Q0VF96 1302 aa19.32■□□□□ 0.68
TIMP1-205ENST00000456754 FAM83GA6ND36 823 aa19.32■□□□□ 0.68
TIMP1-205ENST00000456754 COG3Q96JB2 828 aa19.32■□□□□ 0.68
TIMP1-205ENST00000456754 KNSTRNQ9Y448 316 aa19.32■□□□□ 0.68
TIMP1-205ENST00000456754 PLCH1Q4KWH8 1693 aa19.32■□□□□ 0.68
TIMP1-205ENST00000456754 CC2D1BQ5T0F9 858 aaKnown RBP19.31■□□□□ 0.68
TIMP1-205ENST00000456754 LTN1O94822 1766 aa19.31■□□□□ 0.68
TIMP1-205ENST00000456754 COL18A1P39060 1754 aa19.29■□□□□ 0.68
TIMP1-205ENST00000456754 RGPD5Q99666 1765 aa19.29■□□□□ 0.68
TIMP1-205ENST00000456754 TNNT2P45379 298 aaPredicted RBP19.29■□□□□ 0.68
TIMP1-205ENST00000456754 NGLY1Q96IV0 654 aa19.29■□□□□ 0.68
TIMP1-205ENST00000456754 RGS17Q9UGC6 210 aaPredicted RBP19.29■□□□□ 0.68
TIMP1-205ENST00000456754 PRDM11Q9NQV5 511 aa19.28■□□□□ 0.68
TIMP1-205ENST00000456754 AFF2P51816 1311 aa19.27■□□□□ 0.68
TIMP1-205ENST00000456754 COL14A1Q05707 1796 aaKnown RBP19.27■□□□□ 0.68
TIMP1-205ENST00000456754 RRS1Q15050 365 aaKnown RBP19.27■□□□□ 0.68
TIMP1-205ENST00000456754 PEAK1Q9H792 1746 aa19.27■□□□□ 0.68
TIMP1-205ENST00000456754 LMO7Q8WWI1 1683 aa19.27■□□□□ 0.67
TIMP1-205ENST00000456754 NRAPQ86VF7 1730 aa19.26■□□□□ 0.67
TIMP1-205ENST00000456754 ARHGEF25Q86VW2 580 aa19.26■□□□□ 0.67
TIMP1-205ENST00000456754 CPDO75976 1380 aa19.26■□□□□ 0.67
TIMP1-205ENST00000456754 CAMTA1Q9Y6Y1 1673 aa19.26■□□□□ 0.67
TIMP1-205ENST00000456754 SLIT2O94813 1529 aa19.25■□□□□ 0.67
TIMP1-205ENST00000456754 KCNH5Q8NCM2 988 aa19.25■□□□□ 0.67
TIMP1-205ENST00000456754 AXIN2Q9Y2T1 843 aa19.25■□□□□ 0.67
TIMP1-205ENST00000456754 MAP2P11137 1827 aaKnown RBP19.25■□□□□ 0.67
TIMP1-205ENST00000456754 MAP3K19Q56UN5 1328 aa19.25■□□□□ 0.67
TIMP1-205ENST00000456754 BCL9LQ86UU0 1499 aa19.24■□□□□ 0.67
TIMP1-205ENST00000456754 NSD2O96028 1365 aa19.23■□□□□ 0.67
TIMP1-205ENST00000456754 MORC1Q86VD1 984 aa19.23■□□□□ 0.67
TIMP1-205ENST00000456754 FNBP4Q8N3X1 1017 aaPredicted RBP19.23■□□□□ 0.67
TIMP1-205ENST00000456754 BTG4Q9NY30 223 aa19.23■□□□□ 0.67
TIMP1-205ENST00000456754 EMILIN1Q9Y6C2 1016 aa19.23■□□□□ 0.67
TIMP1-205ENST00000456754 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
TIMP1-205ENST00000456754 NWD2Q9ULI1 1742 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms