RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
LINC00959-201ENST00000456581 USP32Q8NFA0 1604 aa16.06■□□□□ 0.16
LINC00959-201ENST00000456581 SEC24BO95487 1268 aa16.06■□□□□ 0.16
LINC00959-201ENST00000456581 HDGFL2Q7Z4V5 671 aaPredicted RBP16.06■□□□□ 0.16
LINC00959-201ENST00000456581 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
LINC00959-201ENST00000456581 U2SURPO15042 1029 aaKnown RBP16.06■□□□□ 0.16
LINC00959-201ENST00000456581 PPM1GO15355 546 aaPredicted RBP16.05■□□□□ 0.16
LINC00959-201ENST00000456581 PRKCSHP14314 528 aaPredicted RBP16.05■□□□□ 0.16
LINC00959-201ENST00000456581 CFAP53Q96M91 514 aa16.05■□□□□ 0.16
LINC00959-201ENST00000456581 WASLO00401 505 aaPredicted RBP16.05■□□□□ 0.16
LINC00959-201ENST00000456581 PANK1Q8TE04 598 aa16.05■□□□□ 0.16
LINC00959-201ENST00000456581 FAM161AQ3B820 660 aa16.04■□□□□ 0.16
LINC00959-201ENST00000456581 TRMT2AQ8IZ69 625 aaKnown RBP16.04■□□□□ 0.16
LINC00959-201ENST00000456581 RUNDC1Q96C34 613 aa16.04■□□□□ 0.16
LINC00959-201ENST00000456581 TNNQ9UQP3 1299 aa16.04■□□□□ 0.16
LINC00959-201ENST00000456581 NLRP1Q9C000 1473 aa16.04■□□□□ 0.16
LINC00959-201ENST00000456581 UBR1Q8IWV7 1749 aa16.04■□□□□ 0.16
LINC00959-201ENST00000456581 NSD2O96028 1365 aa16.03■□□□□ 0.16
LINC00959-201ENST00000456581 ROBO2Q9HCK4 1378 aa16.03■□□□□ 0.16
LINC00959-201ENST00000456581 NINLQ9Y2I6 1382 aa16.03■□□□□ 0.16
LINC00959-201ENST00000456581 NUDT16Q96DE0 195 aaKnown RBP16.02■□□□□ 0.16
LINC00959-201ENST00000456581 BCL2L13Q9BXK5 485 aa16.02■□□□□ 0.16
LINC00959-201ENST00000456581 DAXXQ9UER7 740 aaPredicted RBP16.02■□□□□ 0.16
LINC00959-201ENST00000456581 COG6Q9Y2V7 657 aa16.02■□□□□ 0.16
LINC00959-201ENST00000456581 NME9Q86XW9 330 aa16.02■□□□□ 0.15
LINC00959-201ENST00000456581 DDRGK1Q96HY6 314 aa16.02■□□□□ 0.15
LINC00959-201ENST00000456581 GSE1Q14687 1217 aa16.01■□□□□ 0.15
LINC00959-201ENST00000456581 ADAMTS13Q76LX8 1427 aa16.01■□□□□ 0.15
LINC00959-201ENST00000456581 DLC1Q96QB1 1528 aa16.01■□□□□ 0.15
LINC00959-201ENST00000456581 HDGFP51858 240 aaKnown RBP16.01■□□□□ 0.15
LINC00959-201ENST00000456581 PRR36Q9H6K5 1346 aa16■□□□□ 0.15
LINC00959-201ENST00000456581 E9PSI1 815 aa16■□□□□ 0.15
LINC00959-201ENST00000456581 PPIP5K1Q6PFW1 1433 aa16■□□□□ 0.15
LINC00959-201ENST00000456581 USP35Q9P2H5 1018 aa15.99■□□□□ 0.15
LINC00959-201ENST00000456581 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.99■□□□□ 0.15
LINC00959-201ENST00000456581 FER1L4A9Z1Z3 1794 aa15.98■□□□□ 0.15
LINC00959-201ENST00000456581 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
LINC00959-201ENST00000456581 EMILIN1Q9Y6C2 1016 aa15.98■□□□□ 0.15
LINC00959-201ENST00000456581 NKTRP30414 1462 aaKnown RBP15.98■□□□□ 0.15
LINC00959-201ENST00000456581 C3P01024 1663 aa15.97■□□□□ 0.15
LINC00959-201ENST00000456581 IQSEC2Q5JU85 1478 aa15.97■□□□□ 0.15
LINC00959-201ENST00000456581 POLKQ9UBT6 870 aa15.97■□□□□ 0.15
LINC00959-201ENST00000456581 CCDC61Q9Y6R9 512 aa15.97■□□□□ 0.15
LINC00959-201ENST00000456581 USP19O94966 1318 aa15.96■□□□□ 0.15
LINC00959-201ENST00000456581 PTPRUQ92729 1446 aa15.96■□□□□ 0.15
LINC00959-201ENST00000456581 CLUAP1Q96AJ1 413 aa15.96■□□□□ 0.15
LINC00959-201ENST00000456581 KDM4FA0A1W2PPD8 638 aa15.95■□□□□ 0.14
LINC00959-201ENST00000456581 COL3A1P02461 1466 aaPredicted RBP15.95■□□□□ 0.14
LINC00959-201ENST00000456581 RRS1Q15050 365 aaKnown RBP15.95■□□□□ 0.14
LINC00959-201ENST00000456581 ARXQ96QS3 562 aa15.95■□□□□ 0.14
LINC00959-201ENST00000456581 PLEKHF1Q96S99 279 aa15.95■□□□□ 0.14
LINC00959-201ENST00000456581 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
LINC00959-201ENST00000456581 DIAPH1O60610 1272 aaKnown RBP15.95■□□□□ 0.14
LINC00959-201ENST00000456581 EID1Q9Y6B2 187 aa15.95■□□□□ 0.14
LINC00959-201ENST00000456581 TSR2Q969E8 191 aaKnown RBP15.94■□□□□ 0.14
LINC00959-201ENST00000456581 SLKQ9H2G2 1235 aaPredicted RBP15.94■□□□□ 0.14
LINC00959-201ENST00000456581 AMOTL2Q9Y2J4 779 aa15.94■□□□□ 0.14
LINC00959-201ENST00000456581 RLBP1P12271 317 aa15.94■□□□□ 0.14
LINC00959-201ENST00000456581 CPS1P31327 1500 aa15.94■□□□□ 0.14
LINC00959-201ENST00000456581 CPSF1Q10570 1443 aaKnown RBP15.93■□□□□ 0.14
LINC00959-201ENST00000456581 PLEKHG1Q9ULL1 1385 aa15.93■□□□□ 0.14
LINC00959-201ENST00000456581 HMOX1P09601 288 aa15.93■□□□□ 0.14
LINC00959-201ENST00000456581 TECPR2O15040 1411 aa15.93■□□□□ 0.14
LINC00959-201ENST00000456581 FAM135BQ49AJ0 1406 aa15.93■□□□□ 0.14
LINC00959-201ENST00000456581 KIF20BQ96Q89 1820 aa15.93■□□□□ 0.14
LINC00959-201ENST00000456581 ATP7BP35670 1465 aa15.93■□□□□ 0.14
LINC00959-201ENST00000456581 SPRYD3Q8NCJ5 442 aa15.92■□□□□ 0.14
LINC00959-201ENST00000456581 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.92■□□□□ 0.14
LINC00959-201ENST00000456581 MAP2P11137 1827 aaKnown RBP15.92■□□□□ 0.14
LINC00959-201ENST00000456581 ANKRD26Q9UPS8 1709 aa15.92■□□□□ 0.14
LINC00959-201ENST00000456581 TMPOP42166 694 aaKnown RBP15.92■□□□□ 0.14
LINC00959-201ENST00000456581 SOX12O15370 315 aa15.91■□□□□ 0.14
LINC00959-201ENST00000456581 MED14O60244 1454 aa15.91■□□□□ 0.14
LINC00959-201ENST00000456581 PMFBP1Q8TBY8 1022 aa15.91■□□□□ 0.14
LINC00959-201ENST00000456581 RBM33Q96EV2 1170 aaKnown RBP15.91■□□□□ 0.14
LINC00959-201ENST00000456581 TRIM35Q9UPQ4 493 aa15.91■□□□□ 0.14
LINC00959-201ENST00000456581 NGEFQ8N5V2 710 aa15.9■□□□□ 0.14
LINC00959-201ENST00000456581 SIRT1Q96EB6 747 aa15.9■□□□□ 0.14
LINC00959-201ENST00000456581 PCDHB15Q9Y5E8 787 aa15.9■□□□□ 0.14
LINC00959-201ENST00000456581 MAPK8IP3Q9UPT6 1336 aa15.9■□□□□ 0.14
LINC00959-201ENST00000456581 PNPLA6Q8IY17 1366 aa15.89■□□□□ 0.14
LINC00959-201ENST00000456581 EDC4Q6P2E9 1401 aaKnown RBP15.89■□□□□ 0.13
LINC00959-201ENST00000456581 ACEP12821 1306 aa15.89■□□□□ 0.13
LINC00959-201ENST00000456581 PRKAR2BP31323 418 aa15.89■□□□□ 0.13
LINC00959-201ENST00000456581 RIPK4P57078 832 aa15.89■□□□□ 0.13
LINC00959-201ENST00000456581 WDR63Q8IWG1 891 aa15.89■□□□□ 0.13
LINC00959-201ENST00000456581 PHACTR3Q96KR7 559 aa15.89■□□□□ 0.13
LINC00959-201ENST00000456581 KNDC1Q76NI1 1749 aa15.88■□□□□ 0.13
LINC00959-201ENST00000456581 RIMS1Q86UR5 1692 aaKnown RBP15.88■□□□□ 0.13
LINC00959-201ENST00000456581 THEMISQ8N1K5 641 aaPredicted RBP15.88■□□□□ 0.13
LINC00959-201ENST00000456581 RARSP54136 660 aaKnown RBP15.88■□□□□ 0.13
LINC00959-201ENST00000456581 COG3Q96JB2 828 aa15.88■□□□□ 0.13
LINC00959-201ENST00000456581 ZNF142P52746 1687 aaPredicted RBP15.88■□□□□ 0.13
LINC00959-201ENST00000456581 CCDC27Q2M243 656 aa15.87■□□□□ 0.13
LINC00959-201ENST00000456581 THUMPD2Q9BTF0 503 aaKnown RBP15.87■□□□□ 0.13
LINC00959-201ENST00000456581 CDC42BPGQ6DT37 1551 aa15.86■□□□□ 0.13
LINC00959-201ENST00000456581 KCNA6P17658 529 aa15.86■□□□□ 0.13
LINC00959-201ENST00000456581 RSPH6AQ9H0K4 717 aa15.86■□□□□ 0.13
LINC00959-201ENST00000456581 TBX22Q9Y458 520 aa15.85■□□□□ 0.13
LINC00959-201ENST00000456581 ADGRB2O60241 1585 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms