RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 MEX3CQ5U5Q3 659 aaKnown RBP11.95□□□□□ -0.5
SP140-207ENST00000456542 CABP1Q9NZU7 370 aa11.95□□□□□ -0.5
SP140-207ENST00000456542 USP6P35125 1406 aa11.94□□□□□ -0.5
SP140-207ENST00000456542 CPSF1Q10570 1443 aaKnown RBP11.94□□□□□ -0.5
SP140-207ENST00000456542 NINLQ9Y2I6 1382 aa11.94□□□□□ -0.5
SP140-207ENST00000456542 NRKQ7Z2Y5 1582 aa11.94□□□□□ -0.5
SP140-207ENST00000456542 TMF1P82094 1093 aa11.93□□□□□ -0.5
SP140-207ENST00000456542 LMOD2Q6P5Q4 547 aa11.93□□□□□ -0.5
SP140-207ENST00000456542 ZNF692Q9BU19 519 aaPredicted RBP11.93□□□□□ -0.5
SP140-207ENST00000456542 RGS17Q9UGC6 210 aaPredicted RBP11.93□□□□□ -0.5
SP140-207ENST00000456542 SSH2Q76I76 1423 aa11.93□□□□□ -0.5
SP140-207ENST00000456542 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
SP140-207ENST00000456542 EIF4G2P78344 907 aaKnown RBP eCLIP11.92□□□□□ -0.5
SP140-207ENST00000456542 PHRF1Q9P1Y6 1649 aaKnown RBP11.92□□□□□ -0.5
SP140-207ENST00000456542 CD163L1Q9NR16 1453 aa11.91□□□□□ -0.5
SP140-207ENST00000456542 ADAMTS2O95450 1211 aa11.91□□□□□ -0.5
SP140-207ENST00000456542 CDCA8Q53HL2 280 aa11.91□□□□□ -0.5
SP140-207ENST00000456542 ZNF772Q68DY9 489 aaPredicted RBP11.91□□□□□ -0.5
SP140-207ENST00000456542 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.91□□□□□ -0.5
SP140-207ENST00000456542 HAP1P54257 671 aaPredicted RBP11.9□□□□□ -0.5
SP140-207ENST00000456542 C8orf37Q96NL8 207 aa11.9□□□□□ -0.5
SP140-207ENST00000456542 NWD2Q9ULI1 1742 aa11.9□□□□□ -0.5
SP140-207ENST00000456542 PIK3C2AO00443 1686 aa11.9□□□□□ -0.5
SP140-207ENST00000456542 KTN1Q86UP2 1357 aaKnown RBP11.9□□□□□ -0.5
SP140-207ENST00000456542 AFF2P51816 1311 aa11.89□□□□□ -0.51
SP140-207ENST00000456542 CABLES1Q8TDN4 633 aa11.89□□□□□ -0.51
SP140-207ENST00000456542 NGLY1Q96IV0 654 aa11.89□□□□□ -0.51
SP140-207ENST00000456542 TERF2IPQ9NYB0 399 aa11.89□□□□□ -0.51
SP140-207ENST00000456542 MYOM1P52179 1685 aa11.89□□□□□ -0.51
SP140-207ENST00000456542 PLCH1Q4KWH8 1693 aa11.89□□□□□ -0.51
SP140-207ENST00000456542 USP54Q70EL1 1684 aa11.89□□□□□ -0.51
SP140-207ENST00000456542 USP19O94966 1318 aa11.88□□□□□ -0.51
SP140-207ENST00000456542 TTC21AQ8NDW8 1320 aa11.88□□□□□ -0.51
SP140-207ENST00000456542 COL14A1Q05707 1796 aaKnown RBP11.88□□□□□ -0.51
SP140-207ENST00000456542 SLIT2O94813 1529 aa11.88□□□□□ -0.51
SP140-207ENST00000456542 HSPA5P11021 654 aaKnown RBP11.88□□□□□ -0.51
SP140-207ENST00000456542 HDGFL2Q7Z4V5 671 aaPredicted RBP11.88□□□□□ -0.51
SP140-207ENST00000456542 FNBP4Q8N3X1 1017 aaPredicted RBP11.88□□□□□ -0.51
SP140-207ENST00000456542 ABTB2Q8N961 1025 aa11.88□□□□□ -0.51
SP140-207ENST00000456542 TMC1Q8TDI8 760 aa11.88□□□□□ -0.51
SP140-207ENST00000456542 SLC12A5Q9H2X9 1139 aa11.88□□□□□ -0.51
SP140-207ENST00000456542 A0A1W2PP64 1363 aa11.88□□□□□ -0.51
SP140-207ENST00000456542 TTC21BQ7Z4L5 1316 aa11.87□□□□□ -0.51
SP140-207ENST00000456542 EDC4Q6P2E9 1401 aaKnown RBP11.87□□□□□ -0.51
SP140-207ENST00000456542 POTEAQ6S8J7 498 aa11.87□□□□□ -0.51
SP140-207ENST00000456542 NLRP13Q86W25 1043 aa11.87□□□□□ -0.51
SP140-207ENST00000456542 SLIT3O75094 1523 aa11.86□□□□□ -0.51
SP140-207ENST00000456542 ANKRD36BQ8N2N9 1353 aa11.86□□□□□ -0.51
SP140-207ENST00000456542 BCL9LQ86UU0 1499 aa11.86□□□□□ -0.51
SP140-207ENST00000456542 NUTM2GQ5VZR2 741 aa11.85□□□□□ -0.51
SP140-207ENST00000456542 USP21Q9UK80 565 aa11.85□□□□□ -0.51
SP140-207ENST00000456542 USP31Q70CQ4 1352 aa11.84□□□□□ -0.51
SP140-207ENST00000456542 NRAPQ86VF7 1730 aa11.84□□□□□ -0.51
SP140-207ENST00000456542 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
SP140-207ENST00000456542 NLRP6P59044 892 aa11.84□□□□□ -0.51
SP140-207ENST00000456542 ATRNO75882 1429 aa11.84□□□□□ -0.51
SP140-207ENST00000456542 CDK12Q9NYV4 1490 aaPredicted RBP11.83□□□□□ -0.52
SP140-207ENST00000456542 CPDO75976 1380 aa11.83□□□□□ -0.52
SP140-207ENST00000456542 GCP02774 474 aa11.83□□□□□ -0.52
SP140-207ENST00000456542 TRPC5Q9UL62 973 aaPredicted RBP11.83□□□□□ -0.52
SP140-207ENST00000456542 KIAA0232Q92628 1395 aa11.82□□□□□ -0.52
SP140-207ENST00000456542 LMO7Q8WWI1 1683 aa11.82□□□□□ -0.52
SP140-207ENST00000456542 FAM83GA6ND36 823 aa11.82□□□□□ -0.52
SP140-207ENST00000456542 UNC5CLQ8IV45 518 aa11.82□□□□□ -0.52
SP140-207ENST00000456542 QTRT2Q9H974 415 aaKnown RBP11.82□□□□□ -0.52
SP140-207ENST00000456542 PRDM11Q9NQV5 511 aa11.82□□□□□ -0.52
SP140-207ENST00000456542 KIF20BQ96Q89 1820 aa11.81□□□□□ -0.52
SP140-207ENST00000456542 OVOS2A0A0J9YW53 1432 aa11.81□□□□□ -0.52
SP140-207ENST00000456542 OVOS2Q6IE36 1432 aa11.81□□□□□ -0.52
SP140-207ENST00000456542 RXRBP28702 533 aa11.81□□□□□ -0.52
SP140-207ENST00000456542 RBM6P78332 1123 aaKnown RBP11.81□□□□□ -0.52
SP140-207ENST00000456542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.81□□□□□ -0.52
SP140-207ENST00000456542 KCNH5Q8NCM2 988 aa11.81□□□□□ -0.52
SP140-207ENST00000456542 NFAT5O94916 1531 aa11.81□□□□□ -0.52
SP140-207ENST00000456542 NME9Q86XW9 330 aa11.8□□□□□ -0.52
SP140-207ENST00000456542 ABCC6O95255 1503 aa11.8□□□□□ -0.52
SP140-207ENST00000456542 COL18A1P39060 1754 aa11.79□□□□□ -0.52
SP140-207ENST00000456542 ZC3H6P61129 1189 aaKnown RBP11.79□□□□□ -0.52
SP140-207ENST00000456542 MAPK8IP2Q13387 824 aaPredicted RBP11.79□□□□□ -0.52
SP140-207ENST00000456542 VPS72Q15906 364 aa11.79□□□□□ -0.52
SP140-207ENST00000456542 BTG4Q9NY30 223 aa11.79□□□□□ -0.52
SP140-207ENST00000456542 GLI3P10071 1580 aa11.79□□□□□ -0.52
SP140-207ENST00000456542 LTN1O94822 1766 aa11.78□□□□□ -0.52
SP140-207ENST00000456542 AATKQ6ZMQ8 1374 aa11.78□□□□□ -0.52
SP140-207ENST00000456542 CAMTA1Q9Y6Y1 1673 aa11.78□□□□□ -0.52
SP140-207ENST00000456542 RGS12O14924 1447 aa11.77□□□□□ -0.52
SP140-207ENST00000456542 C11orf95C9JLR9 678 aaPredicted RBP11.77□□□□□ -0.53
SP140-207ENST00000456542 CHRNA2Q15822 529 aa11.77□□□□□ -0.53
SP140-207ENST00000456542 GJD4Q96KN9 370 aaPredicted RBP11.77□□□□□ -0.53
SP140-207ENST00000456542 NSD3Q9BZ95 1437 aa11.77□□□□□ -0.53
SP140-207ENST00000456542 ARHGEF25Q86VW2 580 aa11.76□□□□□ -0.53
SP140-207ENST00000456542 POLR3GLQ9BT43 218 aa11.76□□□□□ -0.53
SP140-207ENST00000456542 ZRANB1Q9UGI0 708 aa11.76□□□□□ -0.53
SP140-207ENST00000456542 ANKRD26Q9UPS8 1709 aa11.76□□□□□ -0.53
SP140-207ENST00000456542 KIF7Q2M1P5 1343 aa11.76□□□□□ -0.53
SP140-207ENST00000456542 RGPD5Q99666 1765 aa11.76□□□□□ -0.53
SP140-207ENST00000456542 COL5A2P05997 1499 aaPredicted RBP11.76□□□□□ -0.53
SP140-207ENST00000456542 FYB1O15117 783 aa11.75□□□□□ -0.53
SP140-207ENST00000456542 COG3Q96JB2 828 aa11.75□□□□□ -0.53
SP140-207ENST00000456542 CARD14Q9BXL6 1004 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms