RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 ANKRD36BQ8N2N9 1353 aa23.77■■□□□ 1.4
PMPCB-206ENST00000456433 TERF2IPQ9NYB0 399 aa23.76■■□□□ 1.39
PMPCB-206ENST00000456433 A0A1W2PP64 1363 aa23.76■■□□□ 1.39
PMPCB-206ENST00000456433 ARHGEF10O15013 1369 aa23.76■■□□□ 1.39
PMPCB-206ENST00000456433 KIF7Q2M1P5 1343 aa23.75■■□□□ 1.39
PMPCB-206ENST00000456433 HDGFL2Q7Z4V5 671 aaPredicted RBP23.74■■□□□ 1.39
PMPCB-206ENST00000456433 KTN1Q86UP2 1357 aaKnown RBP23.74■■□□□ 1.39
PMPCB-206ENST00000456433 SPATA31A6Q5VVP1 1343 aa23.72■■□□□ 1.39
PMPCB-206ENST00000456433 EDC4Q6P2E9 1401 aaKnown RBP23.72■■□□□ 1.39
PMPCB-206ENST00000456433 MED1Q15648 1581 aaPredicted RBP23.72■■□□□ 1.39
PMPCB-206ENST00000456433 CCDC7Q96M83 1385 aa23.71■■□□□ 1.39
PMPCB-206ENST00000456433 TTC21AQ8NDW8 1320 aa23.7■■□□□ 1.38
PMPCB-206ENST00000456433 TTC21BQ7Z4L5 1316 aa23.69■■□□□ 1.38
PMPCB-206ENST00000456433 WASHC2AQ641Q2 1341 aa23.68■■□□□ 1.38
PMPCB-206ENST00000456433 CRYBG1Q9Y4K1 1723 aa23.67■■□□□ 1.38
PMPCB-206ENST00000456433 PIK3C2AO00443 1686 aa23.67■■□□□ 1.38
PMPCB-206ENST00000456433 PAK3O75914 559 aaPredicted RBP23.67■■□□□ 1.38
PMPCB-206ENST00000456433 ABCA3Q99758 1704 aa23.67■■□□□ 1.38
PMPCB-206ENST00000456433 USP54Q70EL1 1684 aa23.67■■□□□ 1.38
PMPCB-206ENST00000456433 POLR3GLQ9BT43 218 aa23.66■■□□□ 1.38
PMPCB-206ENST00000456433 LRP6O75581 1613 aa23.63■■□□□ 1.37
PMPCB-206ENST00000456433 ABTB2Q8N961 1025 aa23.63■■□□□ 1.37
PMPCB-206ENST00000456433 USP19O94966 1318 aa23.62■■□□□ 1.37
PMPCB-206ENST00000456433 MARF1Q9Y4F3 1742 aaKnown RBP23.62■■□□□ 1.37
PMPCB-206ENST00000456433 LMOD2Q6P5Q4 547 aa23.62■■□□□ 1.37
PMPCB-206ENST00000456433 USP31Q70CQ4 1352 aa23.62■■□□□ 1.37
PMPCB-206ENST00000456433 PHRF1Q9P1Y6 1649 aaKnown RBP23.61■■□□□ 1.37
PMPCB-206ENST00000456433 NLRP13Q86W25 1043 aa23.6■■□□□ 1.37
PMPCB-206ENST00000456433 CARD14Q9BXL6 1004 aa23.6■■□□□ 1.37
PMPCB-206ENST00000456433 NSD3Q9BZ95 1437 aa23.59■■□□□ 1.37
PMPCB-206ENST00000456433 SLIT3O75094 1523 aa23.59■■□□□ 1.37
PMPCB-206ENST00000456433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.58■■□□□ 1.37
PMPCB-206ENST00000456433 PANK3Q9H999 370 aa23.58■■□□□ 1.37
PMPCB-206ENST00000456433 KIF20BQ96Q89 1820 aa23.58■■□□□ 1.37
PMPCB-206ENST00000456433 OVOS2A0A0J9YW53 1432 aa23.57■■□□□ 1.36
PMPCB-206ENST00000456433 OVOS2Q6IE36 1432 aa23.57■■□□□ 1.36
PMPCB-206ENST00000456433 NLRP6P59044 892 aa23.56■■□□□ 1.36
PMPCB-206ENST00000456433 NME9Q86XW9 330 aa23.56■■□□□ 1.36
PMPCB-206ENST00000456433 NUTM2GQ5VZR2 741 aa23.55■■□□□ 1.36
PMPCB-206ENST00000456433 CABLES1Q8TDN4 633 aa23.55■■□□□ 1.36
PMPCB-206ENST00000456433 NUTM2BA6NNL0 878 aaPredicted RBP23.54■■□□□ 1.36
PMPCB-206ENST00000456433 NUTM2EB1AL46 878 aaPredicted RBP23.54■■□□□ 1.36
PMPCB-206ENST00000456433 NUTM2AQ8IVF1 878 aaPredicted RBP23.54■■□□□ 1.36
PMPCB-206ENST00000456433 CGNL1Q0VF96 1302 aa23.53■■□□□ 1.36
PMPCB-206ENST00000456433 FYB1O15117 783 aa23.52■■□□□ 1.36
PMPCB-206ENST00000456433 CPDO75976 1380 aa23.51■■□□□ 1.35
PMPCB-206ENST00000456433 ANKRD26Q9UPS8 1709 aa23.5■■□□□ 1.35
PMPCB-206ENST00000456433 NFAT5O94916 1531 aa23.5■■□□□ 1.35
PMPCB-206ENST00000456433 GCP02774 474 aa23.5■■□□□ 1.35
PMPCB-206ENST00000456433 HAP1P54257 671 aaPredicted RBP23.5■■□□□ 1.35
PMPCB-206ENST00000456433 NSD2O96028 1365 aa23.5■■□□□ 1.35
PMPCB-206ENST00000456433 PER1O15534 1290 aaPredicted RBP23.49■■□□□ 1.35
PMPCB-206ENST00000456433 KCNH5Q8NCM2 988 aa23.49■■□□□ 1.35
PMPCB-206ENST00000456433 ZRANB1Q9UGI0 708 aa23.49■■□□□ 1.35
PMPCB-206ENST00000456433 ADAMTS2O95450 1211 aa23.48■■□□□ 1.35
PMPCB-206ENST00000456433 COG3Q96JB2 828 aa23.48■■□□□ 1.35
PMPCB-206ENST00000456433 MEX3CQ5U5Q3 659 aaKnown RBP23.47■■□□□ 1.35
PMPCB-206ENST00000456433 KNSTRNQ9Y448 316 aa23.47■■□□□ 1.35
PMPCB-206ENST00000456433 COL14A1Q05707 1796 aaKnown RBP23.47■■□□□ 1.35
PMPCB-206ENST00000456433 NWD2Q9ULI1 1742 aa23.45■■□□□ 1.34
PMPCB-206ENST00000456433 NPC1L1Q9UHC9 1359 aa23.45■■□□□ 1.34
PMPCB-206ENST00000456433 GGNBP2Q9H3C7 697 aa23.45■■□□□ 1.34
PMPCB-206ENST00000456433 SLIT2O94813 1529 aa23.44■■□□□ 1.34
PMPCB-206ENST00000456433 KIAA0232Q92628 1395 aa23.44■■□□□ 1.34
PMPCB-206ENST00000456433 ZNF316A6NFI3 1004 aaPredicted RBP23.44■■□□□ 1.34
PMPCB-206ENST00000456433 PLEKHG5O94827 1062 aa23.44■■□□□ 1.34
PMPCB-206ENST00000456433 AMER1Q5JTC6 1135 aaPredicted RBP23.44■■□□□ 1.34
PMPCB-206ENST00000456433 FNBP4Q8N3X1 1017 aaPredicted RBP23.44■■□□□ 1.34
PMPCB-206ENST00000456433 PLCH1Q4KWH8 1693 aa23.44■■□□□ 1.34
PMPCB-206ENST00000456433 ABCC6O95255 1503 aa23.43■■□□□ 1.34
PMPCB-206ENST00000456433 ILDR2Q71H61 639 aa23.43■■□□□ 1.34
PMPCB-206ENST00000456433 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.42■■□□□ 1.34
PMPCB-206ENST00000456433 LMO7Q8WWI1 1683 aa23.42■■□□□ 1.34
PMPCB-206ENST00000456433 C8orf37Q96NL8 207 aa23.42■■□□□ 1.34
PMPCB-206ENST00000456433 PRDM11Q9NQV5 511 aa23.42■■□□□ 1.34
PMPCB-206ENST00000456433 FAM83GA6ND36 823 aa23.41■■□□□ 1.34
PMPCB-206ENST00000456433 ZC3H6P61129 1189 aaKnown RBP23.41■■□□□ 1.34
PMPCB-206ENST00000456433 ARHGEF25Q86VW2 580 aa23.41■■□□□ 1.34
PMPCB-206ENST00000456433 COL18A1P39060 1754 aa23.41■■□□□ 1.34
PMPCB-206ENST00000456433 LTN1O94822 1766 aa23.4■■□□□ 1.34
PMPCB-206ENST00000456433 NGLY1Q96IV0 654 aa23.4■■□□□ 1.34
PMPCB-206ENST00000456433 AATKQ6ZMQ8 1374 aa23.4■■□□□ 1.34
PMPCB-206ENST00000456433 AFF2P51816 1311 aa23.39■■□□□ 1.34
PMPCB-206ENST00000456433 NRAPQ86VF7 1730 aa23.39■■□□□ 1.33
PMPCB-206ENST00000456433 BCL9LQ86UU0 1499 aa23.38■■□□□ 1.33
PMPCB-206ENST00000456433 PHF23Q9BUL5 403 aaPredicted RBP23.38■■□□□ 1.33
PMPCB-206ENST00000456433 RGS17Q9UGC6 210 aaPredicted RBP23.36■■□□□ 1.33
PMPCB-206ENST00000456433 SOX12O15370 315 aa23.35■■□□□ 1.33
PMPCB-206ENST00000456433 ZNF772Q68DY9 489 aaPredicted RBP23.35■■□□□ 1.33
PMPCB-206ENST00000456433 CAMTA1Q9Y6Y1 1673 aa23.35■■□□□ 1.33
PMPCB-206ENST00000456433 DDX10Q13206 875 aaKnown RBP23.34■■□□□ 1.33
PMPCB-206ENST00000456433 CHRNA2Q15822 529 aa23.34■■□□□ 1.33
PMPCB-206ENST00000456433 KIF24Q5T7B8 1368 aa23.34■■□□□ 1.33
PMPCB-206ENST00000456433 RTL1A6NKG5 1358 aa23.33■■□□□ 1.33
PMPCB-206ENST00000456433 UNC5CLQ8IV45 518 aa23.33■■□□□ 1.33
PMPCB-206ENST00000456433 USP21Q9UK80 565 aa23.33■■□□□ 1.33
PMPCB-206ENST00000456433 MAP2P11137 1827 aaKnown RBP23.33■■□□□ 1.32
PMPCB-206ENST00000456433 BTG4Q9NY30 223 aa23.32■■□□□ 1.32
PMPCB-206ENST00000456433 ATRNO75882 1429 aa23.32■■□□□ 1.32
PMPCB-206ENST00000456433 MAP3K19Q56UN5 1328 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms