RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 SPATA31A3Q5VYP0 1347 aa26.06■■□□□ 1.76
SBDSP1-205ENST00000456312 LRRC59Q96AG4 307 aaKnown RBP26.05■■□□□ 1.76
SBDSP1-205ENST00000456312 BRD4O60885 1362 aaPredicted RBP26.05■■□□□ 1.76
SBDSP1-205ENST00000456312 A0A1W2PP64 1363 aa26.04■■□□□ 1.76
SBDSP1-205ENST00000456312 PSME1Q06323 249 aa26.02■■□□□ 1.76
SBDSP1-205ENST00000456312 KIF7Q2M1P5 1343 aa26.01■■□□□ 1.75
SBDSP1-205ENST00000456312 ANKRD36BQ8N2N9 1353 aa26.01■■□□□ 1.75
SBDSP1-205ENST00000456312 PHRF1Q9P1Y6 1649 aaKnown RBP26.01■■□□□ 1.75
SBDSP1-205ENST00000456312 LRP6O75581 1613 aa25.99■■□□□ 1.75
SBDSP1-205ENST00000456312 TMC1Q8TDI8 760 aa25.98■■□□□ 1.75
SBDSP1-205ENST00000456312 ZNF692Q9BU19 519 aaPredicted RBP25.98■■□□□ 1.75
SBDSP1-205ENST00000456312 KIF20BQ96Q89 1820 aa25.98■■□□□ 1.75
SBDSP1-205ENST00000456312 KTN1Q86UP2 1357 aaKnown RBP25.97■■□□□ 1.75
SBDSP1-205ENST00000456312 CCDC7Q96M83 1385 aa25.97■■□□□ 1.75
SBDSP1-205ENST00000456312 EDC4Q6P2E9 1401 aaKnown RBP25.97■■□□□ 1.75
SBDSP1-205ENST00000456312 ARHGEF10O15013 1369 aa25.96■■□□□ 1.75
SBDSP1-205ENST00000456312 WASHC2AQ641Q2 1341 aa25.96■■□□□ 1.75
SBDSP1-205ENST00000456312 SPATA31A6Q5VVP1 1343 aa25.94■■□□□ 1.74
SBDSP1-205ENST00000456312 TTC21BQ7Z4L5 1316 aa25.93■■□□□ 1.74
SBDSP1-205ENST00000456312 TERF2IPQ9NYB0 399 aa25.93■■□□□ 1.74
SBDSP1-205ENST00000456312 HDGFL2Q7Z4V5 671 aaPredicted RBP25.91■■□□□ 1.74
SBDSP1-205ENST00000456312 SLIT3O75094 1523 aa25.91■■□□□ 1.74
SBDSP1-205ENST00000456312 TTC21AQ8NDW8 1320 aa25.9■■□□□ 1.74
SBDSP1-205ENST00000456312 ANKRD26Q9UPS8 1709 aa25.9■■□□□ 1.74
SBDSP1-205ENST00000456312 USP19O94966 1318 aa25.88■■□□□ 1.73
SBDSP1-205ENST00000456312 CARD14Q9BXL6 1004 aa25.88■■□□□ 1.73
SBDSP1-205ENST00000456312 USP31Q70CQ4 1352 aa25.87■■□□□ 1.73
SBDSP1-205ENST00000456312 PAK3O75914 559 aaPredicted RBP25.87■■□□□ 1.73
SBDSP1-205ENST00000456312 OVOS2A0A0J9YW53 1432 aa25.87■■□□□ 1.73
SBDSP1-205ENST00000456312 OVOS2Q6IE36 1432 aa25.87■■□□□ 1.73
SBDSP1-205ENST00000456312 NSD3Q9BZ95 1437 aa25.85■■□□□ 1.73
SBDSP1-205ENST00000456312 ILDR2Q71H61 639 aa25.84■■□□□ 1.73
SBDSP1-205ENST00000456312 POLR3GLQ9BT43 218 aa25.84■■□□□ 1.73
SBDSP1-205ENST00000456312 ABTB2Q8N961 1025 aa25.83■■□□□ 1.73
SBDSP1-205ENST00000456312 NFAT5O94916 1531 aa25.83■■□□□ 1.72
SBDSP1-205ENST00000456312 PLCH1Q4KWH8 1693 aa25.82■■□□□ 1.72
SBDSP1-205ENST00000456312 LMOD2Q6P5Q4 547 aa25.81■■□□□ 1.72
SBDSP1-205ENST00000456312 NME9Q86XW9 330 aa25.81■■□□□ 1.72
SBDSP1-205ENST00000456312 CABLES1Q8TDN4 633 aa25.81■■□□□ 1.72
SBDSP1-205ENST00000456312 LTN1O94822 1766 aa25.8■■□□□ 1.72
SBDSP1-205ENST00000456312 COL18A1P39060 1754 aa25.8■■□□□ 1.72
SBDSP1-205ENST00000456312 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.8■■□□□ 1.72
SBDSP1-205ENST00000456312 PANK3Q9H999 370 aa25.8■■□□□ 1.72
SBDSP1-205ENST00000456312 NWD2Q9ULI1 1742 aa25.8■■□□□ 1.72
SBDSP1-205ENST00000456312 NUTM2GQ5VZR2 741 aa25.79■■□□□ 1.72
SBDSP1-205ENST00000456312 LMO7Q8WWI1 1683 aa25.78■■□□□ 1.72
SBDSP1-205ENST00000456312 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.78■■□□□ 1.72
SBDSP1-205ENST00000456312 COL14A1Q05707 1796 aaKnown RBP25.78■■□□□ 1.72
SBDSP1-205ENST00000456312 SOCS7O14512 581 aa25.78■■□□□ 1.72
SBDSP1-205ENST00000456312 NLRP13Q86W25 1043 aa25.78■■□□□ 1.72
SBDSP1-205ENST00000456312 ZRANB1Q9UGI0 708 aa25.78■■□□□ 1.72
SBDSP1-205ENST00000456312 NRAPQ86VF7 1730 aa25.77■■□□□ 1.72
SBDSP1-205ENST00000456312 FYB1O15117 783 aa25.76■■□□□ 1.71
SBDSP1-205ENST00000456312 PER1O15534 1290 aaPredicted RBP25.76■■□□□ 1.71
SBDSP1-205ENST00000456312 NLRP6P59044 892 aa25.76■■□□□ 1.71
SBDSP1-205ENST00000456312 NUTM2BA6NNL0 878 aaPredicted RBP25.75■■□□□ 1.71
SBDSP1-205ENST00000456312 NUTM2EB1AL46 878 aaPredicted RBP25.75■■□□□ 1.71
SBDSP1-205ENST00000456312 NUTM2AQ8IVF1 878 aaPredicted RBP25.75■■□□□ 1.71
SBDSP1-205ENST00000456312 RGPD5Q99666 1765 aa25.74■■□□□ 1.71
SBDSP1-205ENST00000456312 CPDO75976 1380 aa25.73■■□□□ 1.71
SBDSP1-205ENST00000456312 SLIT2O94813 1529 aa25.73■■□□□ 1.71
SBDSP1-205ENST00000456312 MAP2P11137 1827 aaKnown RBP25.72■■□□□ 1.71
SBDSP1-205ENST00000456312 GCP02774 474 aa25.71■■□□□ 1.71
SBDSP1-205ENST00000456312 CGNL1Q0VF96 1302 aa25.69■■□□□ 1.7
SBDSP1-205ENST00000456312 ABCC6O95255 1503 aa25.69■■□□□ 1.7
SBDSP1-205ENST00000456312 ADAMTS2O95450 1211 aa25.69■■□□□ 1.7
SBDSP1-205ENST00000456312 KIAA0232Q92628 1395 aa25.69■■□□□ 1.7
SBDSP1-205ENST00000456312 AMER1Q5JTC6 1135 aaPredicted RBP25.68■■□□□ 1.7
SBDSP1-205ENST00000456312 GGNBP2Q9H3C7 697 aa25.68■■□□□ 1.7
SBDSP1-205ENST00000456312 NSD2O96028 1365 aa25.68■■□□□ 1.7
SBDSP1-205ENST00000456312 PLEKHG5O94827 1062 aa25.67■■□□□ 1.7
SBDSP1-205ENST00000456312 FNBP4Q8N3X1 1017 aaPredicted RBP25.66■■□□□ 1.7
SBDSP1-205ENST00000456312 RGS17Q9UGC6 210 aaPredicted RBP25.66■■□□□ 1.7
SBDSP1-205ENST00000456312 NPC1L1Q9UHC9 1359 aa25.66■■□□□ 1.7
SBDSP1-205ENST00000456312 BCL9LQ86UU0 1499 aa25.66■■□□□ 1.7
SBDSP1-205ENST00000456312 PEAK1Q9H792 1746 aa25.66■■□□□ 1.7
SBDSP1-205ENST00000456312 CAMTA1Q9Y6Y1 1673 aa25.65■■□□□ 1.7
SBDSP1-205ENST00000456312 KCNH5Q8NCM2 988 aa25.65■■□□□ 1.7
SBDSP1-205ENST00000456312 FAM83GA6ND36 823 aa25.64■■□□□ 1.7
SBDSP1-205ENST00000456312 COG3Q96JB2 828 aa25.64■■□□□ 1.7
SBDSP1-205ENST00000456312 ARHGEF25Q86VW2 580 aa25.63■■□□□ 1.69
SBDSP1-205ENST00000456312 C8orf37Q96NL8 207 aa25.63■■□□□ 1.69
SBDSP1-205ENST00000456312 HAP1P54257 671 aaPredicted RBP25.62■■□□□ 1.69
SBDSP1-205ENST00000456312 ZC3H6P61129 1189 aaKnown RBP25.62■■□□□ 1.69
SBDSP1-205ENST00000456312 MEX3CQ5U5Q3 659 aaKnown RBP25.62■■□□□ 1.69
SBDSP1-205ENST00000456312 ZNF316A6NFI3 1004 aaPredicted RBP25.61■■□□□ 1.69
SBDSP1-205ENST00000456312 KNSTRNQ9Y448 316 aa25.61■■□□□ 1.69
SBDSP1-205ENST00000456312 AFF2P51816 1311 aa25.61■■□□□ 1.69
SBDSP1-205ENST00000456312 AATKQ6ZMQ8 1374 aa25.6■■□□□ 1.69
SBDSP1-205ENST00000456312 PRDM11Q9NQV5 511 aa25.58■■□□□ 1.69
SBDSP1-205ENST00000456312 ATRNO75882 1429 aa25.57■■□□□ 1.68
SBDSP1-205ENST00000456312 FBLN1P23142 703 aa25.57■■□□□ 1.68
SBDSP1-205ENST00000456312 CHRNA2Q15822 529 aa25.57■■□□□ 1.68
SBDSP1-205ENST00000456312 NGLY1Q96IV0 654 aa25.57■■□□□ 1.68
SBDSP1-205ENST00000456312 COL5A2P05997 1499 aaPredicted RBP25.57■■□□□ 1.68
SBDSP1-205ENST00000456312 SMG6Q86US8 1419 aaKnown RBP25.55■■□□□ 1.68
SBDSP1-205ENST00000456312 SOX12O15370 315 aa25.55■■□□□ 1.68
SBDSP1-205ENST00000456312 GLI3P10071 1580 aa25.55■■□□□ 1.68
SBDSP1-205ENST00000456312 FAM208AQ9UK61 1670 aaKnown RBP25.55■■□□□ 1.68
SBDSP1-205ENST00000456312 RGPD2P0DJD1 1756 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms