RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 NRAPQ86VF7 1730 aa9.94□□□□□ -0.82
COMMD1-205ENST00000455659 NINLQ9Y2I6 1382 aa9.94□□□□□ -0.82
COMMD1-205ENST00000455659 TESK2Q96S53 571 aa9.94□□□□□ -0.82
COMMD1-205ENST00000455659 COL14A1Q05707 1796 aaKnown RBP9.93□□□□□ -0.82
COMMD1-205ENST00000455659 CD163L1Q9NR16 1453 aa9.93□□□□□ -0.82
COMMD1-205ENST00000455659 LMOD2Q6P5Q4 547 aa9.93□□□□□ -0.82
COMMD1-205ENST00000455659 PLEKHG3A1L390 1219 aa9.92□□□□□ -0.82
COMMD1-205ENST00000455659 PAK3O75914 559 aaPredicted RBP9.92□□□□□ -0.82
COMMD1-205ENST00000455659 ADAMTS2O95450 1211 aa9.92□□□□□ -0.82
COMMD1-205ENST00000455659 HAP1P54257 671 aaPredicted RBP9.92□□□□□ -0.82
COMMD1-205ENST00000455659 SLIT3O75094 1523 aa9.92□□□□□ -0.82
COMMD1-205ENST00000455659 CPSF1Q10570 1443 aaKnown RBP9.91□□□□□ -0.82
COMMD1-205ENST00000455659 A0A1W2PP64 1363 aa9.91□□□□□ -0.82
COMMD1-205ENST00000455659 BRD4O60885 1362 aaPredicted RBP9.91□□□□□ -0.82
COMMD1-205ENST00000455659 PLEKHG5O94827 1062 aa9.91□□□□□ -0.82
COMMD1-205ENST00000455659 TMF1P82094 1093 aa9.91□□□□□ -0.82
COMMD1-205ENST00000455659 C8orf37Q96NL8 207 aa9.91□□□□□ -0.82
COMMD1-205ENST00000455659 CABP1Q9NZU7 370 aa9.91□□□□□ -0.82
COMMD1-205ENST00000455659 SSH2Q76I76 1423 aa9.9□□□□□ -0.82
COMMD1-205ENST00000455659 KTN1Q86UP2 1357 aaKnown RBP9.9□□□□□ -0.82
COMMD1-205ENST00000455659 AFF2P51816 1311 aa9.9□□□□□ -0.82
COMMD1-205ENST00000455659 SLC24A1O60721 1099 aa9.9□□□□□ -0.82
COMMD1-205ENST00000455659 LTN1O94822 1766 aa9.9□□□□□ -0.82
COMMD1-205ENST00000455659 EDC4Q6P2E9 1401 aaKnown RBP9.9□□□□□ -0.83
COMMD1-205ENST00000455659 EIF4G2P78344 907 aaKnown RBP eCLIP9.89□□□□□ -0.83
COMMD1-205ENST00000455659 TMC1Q8TDI8 760 aa9.89□□□□□ -0.83
COMMD1-205ENST00000455659 ANKRD36BQ8N2N9 1353 aa9.88□□□□□ -0.83
COMMD1-205ENST00000455659 USP19O94966 1318 aa9.88□□□□□ -0.83
COMMD1-205ENST00000455659 SLIT2O94813 1529 aa9.88□□□□□ -0.83
COMMD1-205ENST00000455659 NFAT5O94916 1531 aa9.88□□□□□ -0.83
COMMD1-205ENST00000455659 LMO7Q8WWI1 1683 aa9.88□□□□□ -0.83
COMMD1-205ENST00000455659 HSPA5P11021 654 aaKnown RBP9.88□□□□□ -0.83
COMMD1-205ENST00000455659 CDCA8Q53HL2 280 aa9.88□□□□□ -0.83
COMMD1-205ENST00000455659 CABLES1Q8TDN4 633 aa9.88□□□□□ -0.83
COMMD1-205ENST00000455659 EP400Q96L91 3159 aa9.88□□□□□ -0.83
COMMD1-205ENST00000455659 ANKRD26Q9UPS8 1709 aa9.87□□□□□ -0.83
COMMD1-205ENST00000455659 NUTM2GQ5VZR2 741 aa9.87□□□□□ -0.83
COMMD1-205ENST00000455659 ZNF772Q68DY9 489 aaPredicted RBP9.87□□□□□ -0.83
COMMD1-205ENST00000455659 HDGFL2Q7Z4V5 671 aaPredicted RBP9.87□□□□□ -0.83
COMMD1-205ENST00000455659 PUS7Q96PZ0 661 aaKnown RBP9.87□□□□□ -0.83
COMMD1-205ENST00000455659 RGS17Q9UGC6 210 aaPredicted RBP9.87□□□□□ -0.83
COMMD1-205ENST00000455659 TTC21AQ8NDW8 1320 aa9.86□□□□□ -0.83
COMMD1-205ENST00000455659 OVOS2A0A0J9YW53 1432 aa9.86□□□□□ -0.83
COMMD1-205ENST00000455659 ATRNO75882 1429 aa9.86□□□□□ -0.83
COMMD1-205ENST00000455659 OVOS2Q6IE36 1432 aa9.86□□□□□ -0.83
COMMD1-205ENST00000455659 ABTB2Q8N961 1025 aa9.86□□□□□ -0.83
COMMD1-205ENST00000455659 NGLY1Q96IV0 654 aa9.86□□□□□ -0.83
COMMD1-205ENST00000455659 TERF2IPQ9NYB0 399 aa9.86□□□□□ -0.83
COMMD1-205ENST00000455659 WNK3Q9BYP7 1800 aa9.86□□□□□ -0.83
COMMD1-205ENST00000455659 ABCC6O95255 1503 aa9.86□□□□□ -0.83
COMMD1-205ENST00000455659 KIAA0232Q92628 1395 aa9.86□□□□□ -0.83
COMMD1-205ENST00000455659 TTC21BQ7Z4L5 1316 aa9.85□□□□□ -0.83
COMMD1-205ENST00000455659 GLI3P10071 1580 aa9.85□□□□□ -0.83
COMMD1-205ENST00000455659 SLC12A5Q9H2X9 1139 aa9.85□□□□□ -0.83
COMMD1-205ENST00000455659 BCL9LQ86UU0 1499 aa9.85□□□□□ -0.83
COMMD1-205ENST00000455659 RGS12O14924 1447 aa9.84□□□□□ -0.83
COMMD1-205ENST00000455659 NSD3Q9BZ95 1437 aa9.84□□□□□ -0.83
COMMD1-205ENST00000455659 RGPD5Q99666 1765 aa9.84□□□□□ -0.83
COMMD1-205ENST00000455659 POTEAQ6S8J7 498 aa9.84□□□□□ -0.83
COMMD1-205ENST00000455659 ILDR2Q71H61 639 aa9.84□□□□□ -0.83
COMMD1-205ENST00000455659 POLR3GLQ9BT43 218 aa9.84□□□□□ -0.83
COMMD1-205ENST00000455659 ZNF692Q9BU19 519 aaPredicted RBP9.84□□□□□ -0.83
COMMD1-205ENST00000455659 PRDM11Q9NQV5 511 aa9.84□□□□□ -0.83
COMMD1-205ENST00000455659 USP21Q9UK80 565 aa9.84□□□□□ -0.83
COMMD1-205ENST00000455659 CPDO75976 1380 aa9.84□□□□□ -0.83
COMMD1-205ENST00000455659 CDK12Q9NYV4 1490 aaPredicted RBP9.84□□□□□ -0.83
COMMD1-205ENST00000455659 COL18A1P39060 1754 aa9.83□□□□□ -0.84
COMMD1-205ENST00000455659 NLRP13Q86W25 1043 aa9.83□□□□□ -0.84
COMMD1-205ENST00000455659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.83□□□□□ -0.84
COMMD1-205ENST00000455659 FAM208AQ9UK61 1670 aaKnown RBP9.83□□□□□ -0.84
COMMD1-205ENST00000455659 NLRP6P59044 892 aa9.82□□□□□ -0.84
COMMD1-205ENST00000455659 FNBP4Q8N3X1 1017 aaPredicted RBP9.82□□□□□ -0.84
COMMD1-205ENST00000455659 USP31Q70CQ4 1352 aa9.82□□□□□ -0.84
COMMD1-205ENST00000455659 THSD7AQ9UPZ6 1657 aa9.81□□□□□ -0.84
COMMD1-205ENST00000455659 COL5A2P05997 1499 aaPredicted RBP9.81□□□□□ -0.84
COMMD1-205ENST00000455659 NME9Q86XW9 330 aa9.81□□□□□ -0.84
COMMD1-205ENST00000455659 TRPC5Q9UL62 973 aaPredicted RBP9.81□□□□□ -0.84
COMMD1-205ENST00000455659 BRWD3Q6RI45 1802 aa9.81□□□□□ -0.84
COMMD1-205ENST00000455659 CAMTA1Q9Y6Y1 1673 aa9.8□□□□□ -0.84
COMMD1-205ENST00000455659 ZBTB7CA1YPR0 619 aa9.8□□□□□ -0.84
COMMD1-205ENST00000455659 SOX12O15370 315 aa9.8□□□□□ -0.84
COMMD1-205ENST00000455659 ZC3H6P61129 1189 aaKnown RBP9.8□□□□□ -0.84
COMMD1-205ENST00000455659 CHRNA2Q15822 529 aa9.8□□□□□ -0.84
COMMD1-205ENST00000455659 UNC5CLQ8IV45 518 aa9.8□□□□□ -0.84
COMMD1-205ENST00000455659 GCP02774 474 aa9.79□□□□□ -0.84
COMMD1-205ENST00000455659 BTG4Q9NY30 223 aa9.79□□□□□ -0.84
COMMD1-205ENST00000455659 KIF7Q2M1P5 1343 aa9.79□□□□□ -0.84
COMMD1-205ENST00000455659 LRRC37A3O60309 1634 aa9.78□□□□□ -0.84
COMMD1-205ENST00000455659 FAM83GA6ND36 823 aa9.78□□□□□ -0.84
COMMD1-205ENST00000455659 RXRBP28702 533 aa9.78□□□□□ -0.84
COMMD1-205ENST00000455659 RBM6P78332 1123 aaKnown RBP9.78□□□□□ -0.84
COMMD1-205ENST00000455659 KCNH5Q8NCM2 988 aa9.78□□□□□ -0.84
COMMD1-205ENST00000455659 ZRANB1Q9UGI0 708 aa9.78□□□□□ -0.84
COMMD1-205ENST00000455659 CCDC9Q9Y3X0 531 aaKnown RBP9.78□□□□□ -0.84
COMMD1-205ENST00000455659 PARP4Q9UKK3 1724 aaKnown RBP9.78□□□□□ -0.84
COMMD1-205ENST00000455659 AATKQ6ZMQ8 1374 aa9.77□□□□□ -0.84
COMMD1-205ENST00000455659 CCDC7Q96M83 1385 aa9.77□□□□□ -0.84
COMMD1-205ENST00000455659 PEAK1Q9H792 1746 aa9.77□□□□□ -0.85
COMMD1-205ENST00000455659 QTRT2Q9H974 415 aaKnown RBP9.77□□□□□ -0.85
COMMD1-205ENST00000455659 RTL1A6NKG5 1358 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms