RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 QRICH2Q9H0J4 1663 aa26.83■■□□□ 1.89
UBE2D4-208ENST00000454350 VPS72Q15906 364 aa26.83■■□□□ 1.89
UBE2D4-208ENST00000454350 L3MBTL2Q969R5 705 aa26.83■■□□□ 1.89
UBE2D4-208ENST00000454350 POLR3AO14802 1390 aaPredicted RBP26.83■■□□□ 1.88
UBE2D4-208ENST00000454350 PHRF1Q9P1Y6 1649 aaKnown RBP26.81■■□□□ 1.88
UBE2D4-208ENST00000454350 SIN3AQ96ST3 1273 aa26.81■■□□□ 1.88
UBE2D4-208ENST00000454350 ONECUT3O60422 494 aaPredicted RBP26.79■■□□□ 1.88
UBE2D4-208ENST00000454350 PLEKHG3A1L390 1219 aa26.77■■□□□ 1.88
UBE2D4-208ENST00000454350 CCDC61Q9Y6R9 512 aa26.77■■□□□ 1.88
UBE2D4-208ENST00000454350 ACEP12821 1306 aa26.76■■□□□ 1.87
UBE2D4-208ENST00000454350 CENPJQ9HC77 1338 aaPredicted RBP26.75■■□□□ 1.87
UBE2D4-208ENST00000454350 PAK3O75914 559 aaPredicted RBP26.75■■□□□ 1.87
UBE2D4-208ENST00000454350 NBPF8Q3BBV2 869 aa26.74■■□□□ 1.87
UBE2D4-208ENST00000454350 BTG4Q9NY30 223 aa26.74■■□□□ 1.87
UBE2D4-208ENST00000454350 SEPT12Q8IYM1 358 aa26.73■■□□□ 1.87
UBE2D4-208ENST00000454350 CCDC125Q86Z20 511 aa26.7■■□□□ 1.86
UBE2D4-208ENST00000454350 PPIP5K1Q6PFW1 1433 aa26.69■■□□□ 1.86
UBE2D4-208ENST00000454350 NRKQ7Z2Y5 1582 aa26.69■■□□□ 1.86
UBE2D4-208ENST00000454350 CCDC9Q9Y3X0 531 aaKnown RBP26.69■■□□□ 1.86
UBE2D4-208ENST00000454350 CABP2Q9NPB3 220 aa26.68■■□□□ 1.86
UBE2D4-208ENST00000454350 KIAA0232Q92628 1395 aa26.68■■□□□ 1.86
UBE2D4-208ENST00000454350 NEUROD1Q13562 356 aa26.67■■□□□ 1.86
UBE2D4-208ENST00000454350 THSD7AQ9UPZ6 1657 aa26.66■■□□□ 1.86
UBE2D4-208ENST00000454350 SRPK2P78362 688 aaKnown RBP26.66■■□□□ 1.86
UBE2D4-208ENST00000454350 NUTM2GQ5VZR2 741 aa26.66■■□□□ 1.86
UBE2D4-208ENST00000454350 SPATA31A5Q5VU36 1347 aa26.65■■□□□ 1.86
UBE2D4-208ENST00000454350 SPATA31A7Q8IWB4 1347 aa26.65■■□□□ 1.86
UBE2D4-208ENST00000454350 BLMP54132 1417 aaPredicted RBP26.65■■□□□ 1.86
UBE2D4-208ENST00000454350 PRDM11Q9NQV5 511 aa26.65■■□□□ 1.86
UBE2D4-208ENST00000454350 USP19O94966 1318 aa26.64■■□□□ 1.85
UBE2D4-208ENST00000454350 LMO7Q8WWI1 1683 aa26.63■■□□□ 1.85
UBE2D4-208ENST00000454350 FAM98CQ17RN3 349 aaKnown RBP26.63■■□□□ 1.85
UBE2D4-208ENST00000454350 CHRNA2Q15822 529 aa26.62■■□□□ 1.85
UBE2D4-208ENST00000454350 KRT27Q7Z3Y8 459 aa26.62■■□□□ 1.85
UBE2D4-208ENST00000454350 ROCK2O75116 1388 aaKnown RBP26.6■■□□□ 1.85
UBE2D4-208ENST00000454350 ZC3H6P61129 1189 aaKnown RBP26.6■■□□□ 1.85
UBE2D4-208ENST00000454350 ABTB2Q8N961 1025 aa26.6■■□□□ 1.85
UBE2D4-208ENST00000454350 AKAP12Q02952 1782 aa26.6■■□□□ 1.85
UBE2D4-208ENST00000454350 CAMTA1Q9Y6Y1 1673 aa26.6■■□□□ 1.85
UBE2D4-208ENST00000454350 SRCAPQ6ZRS2 3230 aa26.6■■□□□ 1.85
UBE2D4-208ENST00000454350 USP6P35125 1406 aa26.59■■□□□ 1.85
UBE2D4-208ENST00000454350 SSH2Q76I76 1423 aa26.59■■□□□ 1.85
UBE2D4-208ENST00000454350 CABP1Q9NZU7 370 aa26.59■■□□□ 1.85
UBE2D4-208ENST00000454350 BRD4O60885 1362 aaPredicted RBP26.58■■□□□ 1.85
UBE2D4-208ENST00000454350 CPDO75976 1380 aa26.58■■□□□ 1.84
UBE2D4-208ENST00000454350 PIK3C2AO00443 1686 aa26.57■■□□□ 1.84
UBE2D4-208ENST00000454350 SPATA31A1Q5TZJ5 1347 aa26.57■■□□□ 1.84
UBE2D4-208ENST00000454350 DEFB132Q7Z7B7 95 aa26.55■■□□□ 1.84
UBE2D4-208ENST00000454350 EVC2Q86UK5 1308 aa26.55■■□□□ 1.84
UBE2D4-208ENST00000454350 SLIT3O75094 1523 aa26.55■■□□□ 1.84
UBE2D4-208ENST00000454350 GCP02774 474 aa26.52■■□□□ 1.84
UBE2D4-208ENST00000454350 RGPD1P0DJD0 1748 aa26.52■■□□□ 1.84
UBE2D4-208ENST00000454350 COL18A1P39060 1754 aa26.52■■□□□ 1.84
UBE2D4-208ENST00000454350 NLRP13Q86W25 1043 aa26.52■■□□□ 1.84
UBE2D4-208ENST00000454350 A0A0G2JS52 829 aa26.51■■□□□ 1.83
UBE2D4-208ENST00000454350 MYT1Q01538 1121 aa26.51■■□□□ 1.83
UBE2D4-208ENST00000454350 TNS1Q9HBL0 1735 aaKnown RBP26.51■■□□□ 1.83
UBE2D4-208ENST00000454350 STRN4Q9NRL3 753 aa26.5■■□□□ 1.83
UBE2D4-208ENST00000454350 ZRANB1Q9UGI0 708 aa26.5■■□□□ 1.83
UBE2D4-208ENST00000454350 FAM182BQ5T319 152 aa26.49■■□□□ 1.83
UBE2D4-208ENST00000454350 MON2Q7Z3U7 1717 aa26.48■■□□□ 1.83
UBE2D4-208ENST00000454350 SBNO2Q9Y2G9 1366 aa26.48■■□□□ 1.83
UBE2D4-208ENST00000454350 CPSF1Q10570 1443 aaKnown RBP26.48■■□□□ 1.83
UBE2D4-208ENST00000454350 COL5A2P05997 1499 aaPredicted RBP26.47■■□□□ 1.83
UBE2D4-208ENST00000454350 LARP1Q6PKG0 1096 aaKnown RBP26.46■■□□□ 1.83
UBE2D4-208ENST00000454350 NLRP6P59044 892 aa26.45■■□□□ 1.82
UBE2D4-208ENST00000454350 RGPD5Q99666 1765 aa26.45■■□□□ 1.82
UBE2D4-208ENST00000454350 SF3B2Q13435 895 aaKnown RBP26.44■■□□□ 1.82
UBE2D4-208ENST00000454350 BARGINQ6ZT62 677 aa26.44■■□□□ 1.82
UBE2D4-208ENST00000454350 EVA1CP58658 441 aa26.43■■□□□ 1.82
UBE2D4-208ENST00000454350 PARP4Q9UKK3 1724 aaKnown RBP26.42■■□□□ 1.82
UBE2D4-208ENST00000454350 TTC21BQ7Z4L5 1316 aa26.42■■□□□ 1.82
UBE2D4-208ENST00000454350 ZNF692Q9BU19 519 aaPredicted RBP26.42■■□□□ 1.82
UBE2D4-208ENST00000454350 CARD11Q9BXL7 1154 aa26.41■■□□□ 1.82
UBE2D4-208ENST00000454350 USP35Q9P2H5 1018 aa26.41■■□□□ 1.82
UBE2D4-208ENST00000454350 AATKQ6ZMQ8 1374 aa26.41■■□□□ 1.82
UBE2D4-208ENST00000454350 TONSLQ96HA7 1378 aa26.4■■□□□ 1.82
UBE2D4-208ENST00000454350 CD163L1Q9NR16 1453 aa26.4■■□□□ 1.82
UBE2D4-208ENST00000454350 USP54Q70EL1 1684 aa26.4■■□□□ 1.82
UBE2D4-208ENST00000454350 DISP2A7MBM2 1401 aa26.39■■□□□ 1.82
UBE2D4-208ENST00000454350 WNK3Q9BYP7 1800 aa26.39■■□□□ 1.81
UBE2D4-208ENST00000454350 TCP11L2Q8N4U5 519 aa26.38■■□□□ 1.81
UBE2D4-208ENST00000454350 BAG6P46379 1132 aa26.37■■□□□ 1.81
UBE2D4-208ENST00000454350 TRIM26Q12899 539 aaPredicted RBP26.37■■□□□ 1.81
UBE2D4-208ENST00000454350 NFAT5O94916 1531 aa26.37■■□□□ 1.81
UBE2D4-208ENST00000454350 TTC21AQ8NDW8 1320 aa26.37■■□□□ 1.81
UBE2D4-208ENST00000454350 CRB1P82279 1406 aa26.36■■□□□ 1.81
UBE2D4-208ENST00000454350 KTN1Q86UP2 1357 aaKnown RBP26.35■■□□□ 1.81
UBE2D4-208ENST00000454350 AXIN2Q9Y2T1 843 aa26.35■■□□□ 1.81
UBE2D4-208ENST00000454350 THRAP3Q9Y2W1 955 aaKnown RBP26.35■■□□□ 1.81
UBE2D4-208ENST00000454350 EN1Q05925 392 aaPredicted RBP26.34■■□□□ 1.81
UBE2D4-208ENST00000454350 ARHGEF25Q86VW2 580 aa26.34■■□□□ 1.81
UBE2D4-208ENST00000454350 PEAK1Q9H792 1746 aa26.34■■□□□ 1.81
UBE2D4-208ENST00000454350 FAM196AQ6ZSG2 479 aa26.33■■□□□ 1.81
UBE2D4-208ENST00000454350 SBF2Q86WG5 1849 aa26.32■■□□□ 1.8
UBE2D4-208ENST00000454350 LRRC37A3O60309 1634 aa26.32■■□□□ 1.8
UBE2D4-208ENST00000454350 ZBTB7CA1YPR0 619 aa26.31■■□□□ 1.8
UBE2D4-208ENST00000454350 TRIM37O94972 964 aa26.3■■□□□ 1.8
UBE2D4-208ENST00000454350 USP31Q70CQ4 1352 aa26.3■■□□□ 1.8
UBE2D4-208ENST00000454350 RREB1Q92766 1687 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms