RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 ITSN1Q15811 1721 aa13.59□□□□□ -0.23
CDC42EP3-203ENST00000453555 ANKARQ7Z5J8 1434 aa13.59□□□□□ -0.23
CDC42EP3-203ENST00000453555 C8orf37Q96NL8 207 aa13.59□□□□□ -0.23
CDC42EP3-203ENST00000453555 PRR36Q9H6K5 1346 aa13.59□□□□□ -0.23
CDC42EP3-203ENST00000453555 ZNF772Q68DY9 489 aaPredicted RBP13.58□□□□□ -0.24
CDC42EP3-203ENST00000453555 AFF2P51816 1311 aa13.58□□□□□ -0.24
CDC42EP3-203ENST00000453555 PSME1Q06323 249 aa13.57□□□□□ -0.24
CDC42EP3-203ENST00000453555 SPATA31A3Q5VYP0 1347 aa13.57□□□□□ -0.24
CDC42EP3-203ENST00000453555 EIF3AQ14152 1382 aaKnown RBP13.57□□□□□ -0.24
CDC42EP3-203ENST00000453555 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
CDC42EP3-203ENST00000453555 CDK19Q9BWU1 502 aa13.56□□□□□ -0.24
CDC42EP3-203ENST00000453555 TRPM3Q9HCF6 1732 aaPredicted RBP13.56□□□□□ -0.24
CDC42EP3-203ENST00000453555 NBPF8Q3BBV2 869 aa13.55□□□□□ -0.24
CDC42EP3-203ENST00000453555 LMOD2Q6P5Q4 547 aa13.55□□□□□ -0.24
CDC42EP3-203ENST00000453555 NGLY1Q96IV0 654 aa13.55□□□□□ -0.24
CDC42EP3-203ENST00000453555 CENPJQ9HC77 1338 aaPredicted RBP13.55□□□□□ -0.24
CDC42EP3-203ENST00000453555 ROCK2O75116 1388 aaKnown RBP13.55□□□□□ -0.24
CDC42EP3-203ENST00000453555 TONSLQ96HA7 1378 aa13.55□□□□□ -0.24
CDC42EP3-203ENST00000453555 TOPAZ1Q8N9V7 1692 aa13.54□□□□□ -0.24
CDC42EP3-203ENST00000453555 NUDT16Q96DE0 195 aaKnown RBP13.54□□□□□ -0.24
CDC42EP3-203ENST00000453555 TNS3Q68CZ2 1445 aa13.54□□□□□ -0.24
CDC42EP3-203ENST00000453555 ATP7BP35670 1465 aa13.54□□□□□ -0.24
CDC42EP3-203ENST00000453555 ABCA3Q99758 1704 aa13.53□□□□□ -0.24
CDC42EP3-203ENST00000453555 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
CDC42EP3-203ENST00000453555 CABLES1Q8TDN4 633 aa13.52□□□□□ -0.25
CDC42EP3-203ENST00000453555 SBNO1A3KN83 1393 aa13.52□□□□□ -0.25
CDC42EP3-203ENST00000453555 GPRASP1Q5JY77 1395 aa13.52□□□□□ -0.25
CDC42EP3-203ENST00000453555 ALS2Q96Q42 1657 aa13.52□□□□□ -0.25
CDC42EP3-203ENST00000453555 RXRBP28702 533 aa13.51□□□□□ -0.25
CDC42EP3-203ENST00000453555 HAP1P54257 671 aaPredicted RBP13.51□□□□□ -0.25
CDC42EP3-203ENST00000453555 SRPK2P78362 688 aaKnown RBP13.51□□□□□ -0.25
CDC42EP3-203ENST00000453555 PCGF6Q9BYE7 350 aa13.51□□□□□ -0.25
CDC42EP3-203ENST00000453555 QTRT2Q9H974 415 aaKnown RBP13.51□□□□□ -0.25
CDC42EP3-203ENST00000453555 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
CDC42EP3-203ENST00000453555 CABP2Q9NPB3 220 aa13.5□□□□□ -0.25
CDC42EP3-203ENST00000453555 USP21Q9UK80 565 aa13.5□□□□□ -0.25
CDC42EP3-203ENST00000453555 ARHGEF10O15013 1369 aa13.48□□□□□ -0.25
CDC42EP3-203ENST00000453555 CCDC61Q9Y6R9 512 aa13.48□□□□□ -0.25
CDC42EP3-203ENST00000453555 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
CDC42EP3-203ENST00000453555 PLCH1Q4KWH8 1693 aa13.47□□□□□ -0.25
CDC42EP3-203ENST00000453555 ACEP12821 1306 aa13.47□□□□□ -0.25
CDC42EP3-203ENST00000453555 PRKAR2AP13861 404 aaKnown RBP13.47□□□□□ -0.25
CDC42EP3-203ENST00000453555 FNBP4Q8N3X1 1017 aaPredicted RBP13.47□□□□□ -0.25
CDC42EP3-203ENST00000453555 CARD11Q9BXL7 1154 aa13.47□□□□□ -0.25
CDC42EP3-203ENST00000453555 RALGAPBQ86X10 1494 aa13.47□□□□□ -0.25
CDC42EP3-203ENST00000453555 PPIP5K1Q6PFW1 1433 aa13.47□□□□□ -0.25
CDC42EP3-203ENST00000453555 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.46□□□□□ -0.25
CDC42EP3-203ENST00000453555 EVC2Q86UK5 1308 aa13.45□□□□□ -0.26
CDC42EP3-203ENST00000453555 BCL9LQ86UU0 1499 aa13.45□□□□□ -0.26
CDC42EP3-203ENST00000453555 PLEKHG3A1L390 1219 aa13.45□□□□□ -0.26
CDC42EP3-203ENST00000453555 RBM6P78332 1123 aaKnown RBP13.45□□□□□ -0.26
CDC42EP3-203ENST00000453555 TRPC5Q9UL62 973 aaPredicted RBP13.45□□□□□ -0.26
CDC42EP3-203ENST00000453555 POLR3AO14802 1390 aaPredicted RBP13.45□□□□□ -0.26
CDC42EP3-203ENST00000453555 PHRF1Q9P1Y6 1649 aaKnown RBP13.44□□□□□ -0.26
CDC42EP3-203ENST00000453555 NUTM2GQ5VZR2 741 aa13.44□□□□□ -0.26
CDC42EP3-203ENST00000453555 RGS12O14924 1447 aa13.44□□□□□ -0.26
CDC42EP3-203ENST00000453555 ATRNO75882 1429 aa13.44□□□□□ -0.26
CDC42EP3-203ENST00000453555 CDK12Q9NYV4 1490 aaPredicted RBP13.43□□□□□ -0.26
CDC42EP3-203ENST00000453555 HAX1O00165 279 aa13.43□□□□□ -0.26
CDC42EP3-203ENST00000453555 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
CDC42EP3-203ENST00000453555 NWD2Q9ULI1 1742 aa13.43□□□□□ -0.26
CDC42EP3-203ENST00000453555 SLIT2O94813 1529 aa13.43□□□□□ -0.26
CDC42EP3-203ENST00000453555 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
CDC42EP3-203ENST00000453555 AKAP12Q02952 1782 aa13.42□□□□□ -0.26
CDC42EP3-203ENST00000453555 COL14A1Q05707 1796 aaKnown RBP13.41□□□□□ -0.26
CDC42EP3-203ENST00000453555 FAM83GA6ND36 823 aa13.41□□□□□ -0.26
CDC42EP3-203ENST00000453555 PRR29P0C7W0 189 aa13.41□□□□□ -0.26
CDC42EP3-203ENST00000453555 UNC5CLQ8IV45 518 aa13.41□□□□□ -0.26
CDC42EP3-203ENST00000453555 NRAPQ86VF7 1730 aa13.4□□□□□ -0.26
CDC42EP3-203ENST00000453555 ABTB2Q8N961 1025 aa13.4□□□□□ -0.26
CDC42EP3-203ENST00000453555 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
CDC42EP3-203ENST00000453555 GJD4Q96KN9 370 aaPredicted RBP13.39□□□□□ -0.27
CDC42EP3-203ENST00000453555 GLI3P10071 1580 aa13.39□□□□□ -0.27
CDC42EP3-203ENST00000453555 CHADLQ6NUI6 762 aa13.38□□□□□ -0.27
CDC42EP3-203ENST00000453555 CCDC9Q9Y3X0 531 aaKnown RBP13.38□□□□□ -0.27
CDC42EP3-203ENST00000453555 BRWD3Q6RI45 1802 aa13.38□□□□□ -0.27
CDC42EP3-203ENST00000453555 USP6P35125 1406 aa13.38□□□□□ -0.27
CDC42EP3-203ENST00000453555 SBNO2Q9Y2G9 1366 aa13.37□□□□□ -0.27
CDC42EP3-203ENST00000453555 ZC3H6P61129 1189 aaKnown RBP13.37□□□□□ -0.27
CDC42EP3-203ENST00000453555 CCER1Q8TC90 406 aaPredicted RBP13.37□□□□□ -0.27
CDC42EP3-203ENST00000453555 BTG4Q9NY30 223 aa13.37□□□□□ -0.27
CDC42EP3-203ENST00000453555 NRKQ7Z2Y5 1582 aa13.37□□□□□ -0.27
CDC42EP3-203ENST00000453555 ST20-MTHFSA0A0A6YYL1 179 aa13.36□□□□□ -0.27
CDC42EP3-203ENST00000453555 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDC42EP3-203ENST00000453555 PRDM11Q9NQV5 511 aa13.36□□□□□ -0.27
CDC42EP3-203ENST00000453555 PIK3C2AO00443 1686 aa13.36□□□□□ -0.27
CDC42EP3-203ENST00000453555 CLSPNQ9HAW4 1339 aa13.36□□□□□ -0.27
CDC42EP3-203ENST00000453555 MON2Q7Z3U7 1717 aa13.36□□□□□ -0.27
CDC42EP3-203ENST00000453555 ATAD2Q6PL18 1390 aa13.35□□□□□ -0.27
CDC42EP3-203ENST00000453555 KIAA0232Q92628 1395 aa13.35□□□□□ -0.27
CDC42EP3-203ENST00000453555 CHRNA2Q15822 529 aa13.35□□□□□ -0.27
CDC42EP3-203ENST00000453555 VPS72Q15906 364 aa13.35□□□□□ -0.27
CDC42EP3-203ENST00000453555 NLRP13Q86W25 1043 aa13.35□□□□□ -0.27
CDC42EP3-203ENST00000453555 BRD4O60885 1362 aaPredicted RBP13.34□□□□□ -0.27
CDC42EP3-203ENST00000453555 TMC1Q8TDI8 760 aa13.34□□□□□ -0.27
CDC42EP3-203ENST00000453555 ZBTB7CA1YPR0 619 aa13.33□□□□□ -0.28
CDC42EP3-203ENST00000453555 NLRP6P59044 892 aa13.33□□□□□ -0.28
CDC42EP3-203ENST00000453555 TIMELESSQ9UNS1 1208 aa13.33□□□□□ -0.28
CDC42EP3-203ENST00000453555 USP19O94966 1318 aa13.33□□□□□ -0.28
CDC42EP3-203ENST00000453555 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms