RNA–Protein interactions for RNA: ENST00000453527.6

CTSB-204, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTSB, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-204ENST00000453527 TOPAZ1Q8N9V7 1692 aa23.36■■□□□ 1.33
CTSB-204ENST00000453527 PNPLA6Q8IY17 1366 aa23.36■■□□□ 1.33
CTSB-204ENST00000453527 U2AF1L5P0DN76 240 aaPredicted RBP23.35■■□□□ 1.33
CTSB-204ENST00000453527 U2AF1Q01081 240 aaKnown RBP eCLIP23.35■■□□□ 1.33
CTSB-204ENST00000453527 B4GALNT3Q6L9W6 998 aa23.35■■□□□ 1.33
CTSB-204ENST00000453527 XRN1Q8IZH2 1706 aaKnown RBP23.35■■□□□ 1.33
CTSB-204ENST00000453527 SETD1BQ9UPS6 1966 aaKnown RBP23.35■■□□□ 1.33
CTSB-204ENST00000453527 TCP11L2Q8N4U5 519 aa23.34■■□□□ 1.33
CTSB-204ENST00000453527 E9PSI1 815 aa23.33■■□□□ 1.33
CTSB-204ENST00000453527 WWC1Q8IX03 1113 aa23.33■■□□□ 1.33
CTSB-204ENST00000453527 MAP2P11137 1827 aaKnown RBP23.33■■□□□ 1.33
CTSB-204ENST00000453527 SPINK5Q9NQ38 1064 aaPredicted RBP23.33■■□□□ 1.32
CTSB-204ENST00000453527 PIK3R4Q99570 1358 aa23.32■■□□□ 1.32
CTSB-204ENST00000453527 NCBP3Q53F19 620 aaKnown RBP23.32■■□□□ 1.32
CTSB-204ENST00000453527 NME9Q86XW9 330 aa23.32■■□□□ 1.32
CTSB-204ENST00000453527 PHF23Q9BUL5 403 aaPredicted RBP23.32■■□□□ 1.32
CTSB-204ENST00000453527 TSHZ2Q9NRE2 1034 aa23.32■■□□□ 1.32
CTSB-204ENST00000453527 PLEKHG3A1L390 1219 aa23.31■■□□□ 1.32
CTSB-204ENST00000453527 POLKQ9UBT6 870 aa23.3■■□□□ 1.32
CTSB-204ENST00000453527 ANKLE2Q86XL3 938 aa23.3■■□□□ 1.32
CTSB-204ENST00000453527 DMRT2Q9Y5R5 561 aa23.3■■□□□ 1.32
CTSB-204ENST00000453527 NKTRP30414 1462 aaKnown RBP23.29■■□□□ 1.32
CTSB-204ENST00000453527 DIAPH1O60610 1272 aaKnown RBP23.29■■□□□ 1.32
CTSB-204ENST00000453527 CCDC27Q2M243 656 aa23.29■■□□□ 1.32
CTSB-204ENST00000453527 U2SURPO15042 1029 aaKnown RBP23.28■■□□□ 1.32
CTSB-204ENST00000453527 RRP7AQ9Y3A4 280 aaKnown RBP23.28■■□□□ 1.32
CTSB-204ENST00000453527 NRKQ7Z2Y5 1582 aa23.27■■□□□ 1.32
CTSB-204ENST00000453527 AATKQ6ZMQ8 1374 aa23.27■■□□□ 1.32
CTSB-204ENST00000453527 ACEP12821 1306 aa23.27■■□□□ 1.32
CTSB-204ENST00000453527 NEUROD2Q15784 382 aa23.27■■□□□ 1.32
CTSB-204ENST00000453527 COG3Q96JB2 828 aa23.26■■□□□ 1.31
CTSB-204ENST00000453527 PLEKHF1Q96S99 279 aa23.26■■□□□ 1.31
CTSB-204ENST00000453527 NUTM2FA1L443 756 aa23.26■■□□□ 1.31
CTSB-204ENST00000453527 FBLN1P23142 703 aa23.26■■□□□ 1.31
CTSB-204ENST00000453527 CCDC136Q96JN2 1154 aa23.26■■□□□ 1.31
CTSB-204ENST00000453527 ZRANB1Q9UGI0 708 aa23.26■■□□□ 1.31
CTSB-204ENST00000453527 KCNA6P17658 529 aa23.25■■□□□ 1.31
CTSB-204ENST00000453527 WDR63Q8IWG1 891 aa23.25■■□□□ 1.31
CTSB-204ENST00000453527 PLIN1O60240 522 aa23.25■■□□□ 1.31
CTSB-204ENST00000453527 EXOC6Q8TAG9 804 aa23.24■■□□□ 1.31
CTSB-204ENST00000453527 CHD2O14647 1828 aaKnown RBP23.24■■□□□ 1.31
CTSB-204ENST00000453527 TTC21BQ7Z4L5 1316 aa23.23■■□□□ 1.31
CTSB-204ENST00000453527 RGPD8O14715 1765 aaPredicted RBP23.23■■□□□ 1.31
CTSB-204ENST00000453527 PPM1GO15355 546 aaPredicted RBP23.23■■□□□ 1.31
CTSB-204ENST00000453527 USP6P35125 1406 aa23.23■■□□□ 1.31
CTSB-204ENST00000453527 PNNQ9H307 717 aaKnown RBP23.22■■□□□ 1.31
CTSB-204ENST00000453527 CDK12Q9NYV4 1490 aaPredicted RBP23.21■■□□□ 1.31
CTSB-204ENST00000453527 EMILIN1Q9Y6C2 1016 aa23.2■■□□□ 1.3
CTSB-204ENST00000453527 FCHSD2O94868 740 aa23.19■■□□□ 1.3
CTSB-204ENST00000453527 SSH2Q76I76 1423 aa23.19■■□□□ 1.3
CTSB-204ENST00000453527 MAPK8IP3Q9UPT6 1336 aa23.19■■□□□ 1.3
CTSB-204ENST00000453527 TMPOP42166 694 aaKnown RBP23.18■■□□□ 1.3
CTSB-204ENST00000453527 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.18■■□□□ 1.3
CTSB-204ENST00000453527 ANKARQ7Z5J8 1434 aa23.18■■□□□ 1.3
CTSB-204ENST00000453527 FMN2Q9NZ56 1722 aa23.16■■□□□ 1.3
CTSB-204ENST00000453527 OVOS2A0A0J9YW53 1432 aa23.16■■□□□ 1.3
CTSB-204ENST00000453527 OVOS2Q6IE36 1432 aa23.16■■□□□ 1.3
CTSB-204ENST00000453527 IL13P35225 146 aa23.15■■□□□ 1.3
CTSB-204ENST00000453527 PMFBP1Q8TBY8 1022 aa23.15■■□□□ 1.3
CTSB-204ENST00000453527 NALCNQ8IZF0 1738 aa23.15■■□□□ 1.3
CTSB-204ENST00000453527 LRRC7Q96NW7 1537 aa23.15■■□□□ 1.3
CTSB-204ENST00000453527 RRS1Q15050 365 aaKnown RBP23.14■■□□□ 1.29
CTSB-204ENST00000453527 CRBNQ96SW2 442 aa23.14■■□□□ 1.29
CTSB-204ENST00000453527 RSPH6AQ9H0K4 717 aa23.14■■□□□ 1.29
CTSB-204ENST00000453527 TTC21AQ8NDW8 1320 aa23.14■■□□□ 1.29
CTSB-204ENST00000453527 C20orf194Q5TEA3 1177 aa23.13■■□□□ 1.29
CTSB-204ENST00000453527 TRIM35Q9UPQ4 493 aa23.13■■□□□ 1.29
CTSB-204ENST00000453527 MYH16Q9H6N6 1097 aa23.13■■□□□ 1.29
CTSB-204ENST00000453527 NPHP4O75161 1426 aaPredicted RBP23.12■■□□□ 1.29
CTSB-204ENST00000453527 NGDNQ8NEJ9 315 aaKnown RBP23.12■■□□□ 1.29
CTSB-204ENST00000453527 USP31Q70CQ4 1352 aa23.11■■□□□ 1.29
CTSB-204ENST00000453527 BCAR3O75815 825 aa23.11■■□□□ 1.29
CTSB-204ENST00000453527 PRKAR2BP31323 418 aa23.1■■□□□ 1.29
CTSB-204ENST00000453527 RIPK4P57078 832 aa23.09■■□□□ 1.29
CTSB-204ENST00000453527 NEFMP07197 916 aa23.08■■□□□ 1.29
CTSB-204ENST00000453527 IL16Q14005 1332 aa23.07■■□□□ 1.28
CTSB-204ENST00000453527 HMOX1P09601 288 aa23.07■■□□□ 1.28
CTSB-204ENST00000453527 PIK3C2AO00443 1686 aa23.05■■□□□ 1.28
CTSB-204ENST00000453527 RARSP54136 660 aaKnown RBP23.04■■□□□ 1.28
CTSB-204ENST00000453527 PHACTR3Q96KR7 559 aa23.04■■□□□ 1.28
CTSB-204ENST00000453527 PEAK1Q9H792 1746 aa23.04■■□□□ 1.28
CTSB-204ENST00000453527 ADGRL3Q9HAR2 1447 aa23.03■■□□□ 1.28
CTSB-204ENST00000453527 FANCIQ9NVI1 1328 aa23.03■■□□□ 1.28
CTSB-204ENST00000453527 RBM19Q9Y4C8 960 aaKnown RBP23.03■■□□□ 1.28
CTSB-204ENST00000453527 NFE2L2Q16236 605 aa23.02■■□□□ 1.28
CTSB-204ENST00000453527 CT47B1P0C2W7 299 aaPredicted RBP23.01■■□□□ 1.27
CTSB-204ENST00000453527 PDE3AQ14432 1141 aa23.01■■□□□ 1.27
CTSB-204ENST00000453527 RBM33Q96EV2 1170 aaKnown RBP23.01■■□□□ 1.27
CTSB-204ENST00000453527 EIF4A2Q14240 407 aaKnown RBP23.01■■□□□ 1.27
CTSB-204ENST00000453527 TSR2Q969E8 191 aaKnown RBP23■■□□□ 1.27
CTSB-204ENST00000453527 NWD1Q149M9 1564 aa23■■□□□ 1.27
CTSB-204ENST00000453527 USP54Q70EL1 1684 aa22.99■■□□□ 1.27
CTSB-204ENST00000453527 PHF8Q9UPP1 1060 aa22.99■■□□□ 1.27
CTSB-204ENST00000453527 HSP90AB2PQ58FF8 381 aa22.98■■□□□ 1.27
CTSB-204ENST00000453527 MARF1Q9Y4F3 1742 aaKnown RBP22.98■■□□□ 1.27
CTSB-204ENST00000453527 DLG5Q8TDM6 1919 aa22.97■■□□□ 1.27
CTSB-204ENST00000453527 RGPD1P0DJD0 1748 aa22.97■■□□□ 1.27
CTSB-204ENST00000453527 MAP3K19Q56UN5 1328 aa22.97■■□□□ 1.27
CTSB-204ENST00000453527 SOX12O15370 315 aa22.96■■□□□ 1.27
CTSB-204ENST00000453527 NLRP6P59044 892 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms