RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 FAM83GA6ND36 823 aa17.1■□□□□ 0.33
GARNL3-210ENST00000453030 WASLO00401 505 aaPredicted RBP17.1■□□□□ 0.33
GARNL3-210ENST00000453030 KIAA1210Q9ULL0 1709 aa17.1■□□□□ 0.33
GARNL3-210ENST00000453030 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.32
GARNL3-210ENST00000453030 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.32
GARNL3-210ENST00000453030 NGDNQ8NEJ9 315 aaKnown RBP17.08■□□□□ 0.32
GARNL3-210ENST00000453030 BTG4Q9NY30 223 aa17.08■□□□□ 0.32
GARNL3-210ENST00000453030 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
GARNL3-210ENST00000453030 SF3B2Q13435 895 aaKnown RBP17.06■□□□□ 0.32
GARNL3-210ENST00000453030 FAM98CQ17RN3 349 aaKnown RBP17.06■□□□□ 0.32
GARNL3-210ENST00000453030 KRT27Q7Z3Y8 459 aa17.06■□□□□ 0.32
GARNL3-210ENST00000453030 THSD7AQ9UPZ6 1657 aa17.06■□□□□ 0.32
GARNL3-210ENST00000453030 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
GARNL3-210ENST00000453030 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
GARNL3-210ENST00000453030 ONECUT3O60422 494 aaPredicted RBP17.03■□□□□ 0.32
GARNL3-210ENST00000453030 QRICH2Q9H0J4 1663 aa17.03■□□□□ 0.32
GARNL3-210ENST00000453030 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.32
GARNL3-210ENST00000453030 NUDT16Q96DE0 195 aaKnown RBP17.02■□□□□ 0.32
GARNL3-210ENST00000453030 PRDM11Q9NQV5 511 aa17.02■□□□□ 0.32
GARNL3-210ENST00000453030 HRCP23327 699 aa17.01■□□□□ 0.31
GARNL3-210ENST00000453030 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
GARNL3-210ENST00000453030 SPATA31A5Q5VU36 1347 aa16.99■□□□□ 0.31
GARNL3-210ENST00000453030 SPATA31A7Q8IWB4 1347 aa16.99■□□□□ 0.31
GARNL3-210ENST00000453030 NUTM2GQ5VZR2 741 aa16.99■□□□□ 0.31
GARNL3-210ENST00000453030 CDK19Q9BWU1 502 aa16.99■□□□□ 0.31
GARNL3-210ENST00000453030 LRP5O75197 1615 aa16.99■□□□□ 0.31
GARNL3-210ENST00000453030 CHRNA2Q15822 529 aa16.98■□□□□ 0.31
GARNL3-210ENST00000453030 FAM182BQ5T319 152 aa16.98■□□□□ 0.31
GARNL3-210ENST00000453030 POLR3AO14802 1390 aaPredicted RBP16.98■□□□□ 0.31
GARNL3-210ENST00000453030 ACEP12821 1306 aa16.96■□□□□ 0.31
GARNL3-210ENST00000453030 BAG6P46379 1132 aa16.96■□□□□ 0.31
GARNL3-210ENST00000453030 STRN4Q9NRL3 753 aa16.96■□□□□ 0.31
GARNL3-210ENST00000453030 LMO7Q8WWI1 1683 aa16.96■□□□□ 0.31
GARNL3-210ENST00000453030 ZC3H6P61129 1189 aaKnown RBP16.95■□□□□ 0.3
GARNL3-210ENST00000453030 NBPF1Q3BBV0 1214 aa16.95■□□□□ 0.3
GARNL3-210ENST00000453030 CCDC61Q9Y6R9 512 aa16.94■□□□□ 0.3
GARNL3-210ENST00000453030 PPIP5K1Q6PFW1 1433 aa16.94■□□□□ 0.3
GARNL3-210ENST00000453030 SPATA31A1Q5TZJ5 1347 aa16.94■□□□□ 0.3
GARNL3-210ENST00000453030 PSDA5PKW4 1024 aaPredicted RBP16.93■□□□□ 0.3
GARNL3-210ENST00000453030 NBPF8Q3BBV2 869 aa16.93■□□□□ 0.3
GARNL3-210ENST00000453030 SSH2Q76I76 1423 aa16.93■□□□□ 0.3
GARNL3-210ENST00000453030 CAMTA1Q9Y6Y1 1673 aa16.92■□□□□ 0.3
GARNL3-210ENST00000453030 SRPK2P78362 688 aaKnown RBP16.92■□□□□ 0.3
GARNL3-210ENST00000453030 USP35Q9P2H5 1018 aa16.92■□□□□ 0.3
GARNL3-210ENST00000453030 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
GARNL3-210ENST00000453030 TRPM1Q7Z4N2 1603 aa16.92■□□□□ 0.3
GARNL3-210ENST00000453030 EN1Q05925 392 aaPredicted RBP16.91■□□□□ 0.3
GARNL3-210ENST00000453030 ABTB2Q8N961 1025 aa16.91■□□□□ 0.3
GARNL3-210ENST00000453030 PLEKHG3A1L390 1219 aa16.9■□□□□ 0.3
GARNL3-210ENST00000453030 DISP2A7MBM2 1401 aa16.89■□□□□ 0.29
GARNL3-210ENST00000453030 PIK3C2AO00443 1686 aa16.89■□□□□ 0.29
GARNL3-210ENST00000453030 CABP2Q9NPB3 220 aa16.89■□□□□ 0.29
GARNL3-210ENST00000453030 PARP4Q9UKK3 1724 aaKnown RBP16.89■□□□□ 0.29
GARNL3-210ENST00000453030 USP19O94966 1318 aa16.89■□□□□ 0.29
GARNL3-210ENST00000453030 RREB1Q92766 1687 aa16.88■□□□□ 0.29
GARNL3-210ENST00000453030 WNK3Q9BYP7 1800 aa16.88■□□□□ 0.29
GARNL3-210ENST00000453030 CPDO75976 1380 aa16.88■□□□□ 0.29
GARNL3-210ENST00000453030 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
GARNL3-210ENST00000453030 EVA1CP58658 441 aa16.87■□□□□ 0.29
GARNL3-210ENST00000453030 AKAP12Q02952 1782 aa16.87■□□□□ 0.29
GARNL3-210ENST00000453030 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
GARNL3-210ENST00000453030 TRIM37O94972 964 aa16.86■□□□□ 0.29
GARNL3-210ENST00000453030 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
GARNL3-210ENST00000453030 USP6P35125 1406 aa16.86■□□□□ 0.29
GARNL3-210ENST00000453030 RGPD5Q99666 1765 aa16.85■□□□□ 0.29
GARNL3-210ENST00000453030 ZBTB7CA1YPR0 619 aa16.85■□□□□ 0.29
GARNL3-210ENST00000453030 EZH2Q15910 746 aaKnown RBP16.85■□□□□ 0.29
GARNL3-210ENST00000453030 SLIT3O75094 1523 aa16.85■□□□□ 0.29
GARNL3-210ENST00000453030 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
GARNL3-210ENST00000453030 R3HDM1Q15032 1099 aaKnown RBP16.84■□□□□ 0.29
GARNL3-210ENST00000453030 FAM196AQ6ZSG2 479 aa16.84■□□□□ 0.29
GARNL3-210ENST00000453030 NLRP13Q86W25 1043 aa16.84■□□□□ 0.29
GARNL3-210ENST00000453030 GCP02774 474 aa16.83■□□□□ 0.28
GARNL3-210ENST00000453030 BARGINQ6ZT62 677 aa16.83■□□□□ 0.28
GARNL3-210ENST00000453030 SBF2Q86WG5 1849 aa16.83■□□□□ 0.28
GARNL3-210ENST00000453030 L3MBTL2Q969R5 705 aa16.83■□□□□ 0.28
GARNL3-210ENST00000453030 COL18A1P39060 1754 aa16.82■□□□□ 0.28
GARNL3-210ENST00000453030 PDE3BQ13370 1112 aa16.82■□□□□ 0.28
GARNL3-210ENST00000453030 TCP11L2Q8N4U5 519 aa16.82■□□□□ 0.28
GARNL3-210ENST00000453030 BRD4O60885 1362 aaPredicted RBP16.81■□□□□ 0.28
GARNL3-210ENST00000453030 CABP1Q9NZU7 370 aa16.81■□□□□ 0.28
GARNL3-210ENST00000453030 PEAK1Q9H792 1746 aa16.81■□□□□ 0.28
GARNL3-210ENST00000453030 CRB1P82279 1406 aa16.8■□□□□ 0.28
GARNL3-210ENST00000453030 APBA3O96018 575 aa16.8■□□□□ 0.28
GARNL3-210ENST00000453030 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
GARNL3-210ENST00000453030 ROCK2O75116 1388 aaKnown RBP16.79■□□□□ 0.28
GARNL3-210ENST00000453030 NLRP6P59044 892 aa16.79■□□□□ 0.28
GARNL3-210ENST00000453030 CAMKK2Q96RR4 588 aa16.79■□□□□ 0.28
GARNL3-210ENST00000453030 SIN3AQ96ST3 1273 aa16.79■□□□□ 0.28
GARNL3-210ENST00000453030 PARD3Q8TEW0 1356 aa16.78■□□□□ 0.28
GARNL3-210ENST00000453030 EVC2Q86UK5 1308 aa16.78■□□□□ 0.28
GARNL3-210ENST00000453030 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.28
GARNL3-210ENST00000453030 RGPD4Q7Z3J3 1758 aa16.77■□□□□ 0.28
GARNL3-210ENST00000453030 NEUROD1Q13562 356 aa16.77■□□□□ 0.28
GARNL3-210ENST00000453030 THRAP3Q9Y2W1 955 aaKnown RBP16.77■□□□□ 0.28
GARNL3-210ENST00000453030 CPSF1Q10570 1443 aaKnown RBP16.77■□□□□ 0.27
GARNL3-210ENST00000453030 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.27
GARNL3-210ENST00000453030 OVOS2A0A0G2JMS6 1433 aa16.76■□□□□ 0.27
GARNL3-210ENST00000453030 OVOS2A0A0J9YW53 1432 aa16.76■□□□□ 0.27
GARNL3-210ENST00000453030 OVOS2Q6IE36 1432 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms