RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 SKOR1P84550 965 aa11.08□□□□□ -0.64
SCN3A-205ENST00000453007 TUSC1Q2TAM9 212 aa11.08□□□□□ -0.64
SCN3A-205ENST00000453007 RC3H1Q5TC82 1133 aaKnown RBP11.08□□□□□ -0.64
SCN3A-205ENST00000453007 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
SCN3A-205ENST00000453007 LILRB3O75022 631 aa11.07□□□□□ -0.64
SCN3A-205ENST00000453007 MYT1Q01538 1121 aa11.07□□□□□ -0.64
SCN3A-205ENST00000453007 LYPD8Q6UX82 237 aa11.07□□□□□ -0.64
SCN3A-205ENST00000453007 LINC01559Q495D7 138 aa11.06□□□□□ -0.64
SCN3A-205ENST00000453007 SNIP1Q8TAD8 396 aaKnown RBP11.06□□□□□ -0.64
SCN3A-205ENST00000453007 EHBP1Q8NDI1 1231 aa11.05□□□□□ -0.64
SCN3A-205ENST00000453007 HELBQ8NG08 1087 aaPredicted RBP11.05□□□□□ -0.64
SCN3A-205ENST00000453007 SKIV2LQ15477 1246 aaKnown RBP11.04□□□□□ -0.64
SCN3A-205ENST00000453007 RTL5Q5HYW3 569 aaPredicted RBP11.04□□□□□ -0.64
SCN3A-205ENST00000453007 BAP1Q92560 729 aa11.04□□□□□ -0.64
SCN3A-205ENST00000453007 SH3D19Q5HYK7 790 aa11.03□□□□□ -0.64
SCN3A-205ENST00000453007 MAP10Q9P2G4 905 aa11.03□□□□□ -0.64
SCN3A-205ENST00000453007 PER1O15534 1290 aaPredicted RBP11.02□□□□□ -0.65
SCN3A-205ENST00000453007 SH3BP2P78314 561 aa11.02□□□□□ -0.65
SCN3A-205ENST00000453007 PLEKHG3A1L390 1219 aa11.01□□□□□ -0.65
SCN3A-205ENST00000453007 ST8SIA5O15466 376 aa11.01□□□□□ -0.65
SCN3A-205ENST00000453007 J3QL48 77 aa11□□□□□ -0.65
SCN3A-205ENST00000453007 ZNF511Q8NB15 262 aa11□□□□□ -0.65
SCN3A-205ENST00000453007 ALDH1A1P00352 501 aa10.99□□□□□ -0.65
SCN3A-205ENST00000453007 F12P00748 615 aaPredicted RBP10.99□□□□□ -0.65
SCN3A-205ENST00000453007 SMPD1P17405 629 aa10.99□□□□□ -0.65
SCN3A-205ENST00000453007 ZNF787Q6DD87 383 aa10.99□□□□□ -0.65
SCN3A-205ENST00000453007 PROCA1Q8NCQ7 364 aaPredicted RBP10.99□□□□□ -0.65
SCN3A-205ENST00000453007 AAASQ9NRG9 546 aa10.98□□□□□ -0.65
SCN3A-205ENST00000453007 AXIN1O15169 862 aa10.97□□□□□ -0.65
SCN3A-205ENST00000453007 AVPP01185 164 aa10.97□□□□□ -0.65
SCN3A-205ENST00000453007 AGERQ15109 404 aa10.95□□□□□ -0.66
SCN3A-205ENST00000453007 CTC1Q2NKJ3 1217 aa10.95□□□□□ -0.66
SCN3A-205ENST00000453007 WASF2Q9Y6W5 498 aa10.95□□□□□ -0.66
SCN3A-205ENST00000453007 CTDSPL2Q05D32 466 aa10.94□□□□□ -0.66
SCN3A-205ENST00000453007 SIAH2O43255 324 aa10.93□□□□□ -0.66
SCN3A-205ENST00000453007 VARSP26640 1264 aaKnown RBP10.93□□□□□ -0.66
SCN3A-205ENST00000453007 CRIPAKQ8N1N5 446 aa10.93□□□□□ -0.66
SCN3A-205ENST00000453007 ARMC2Q8NEN0 867 aa10.93□□□□□ -0.66
SCN3A-205ENST00000453007 HPS1Q92902 700 aa10.93□□□□□ -0.66
SCN3A-205ENST00000453007 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.93□□□□□ -0.66
SCN3A-205ENST00000453007 ZMYND15Q9H091 742 aa10.92□□□□□ -0.66
SCN3A-205ENST00000453007 TLL2Q9Y6L7 1015 aa10.92□□□□□ -0.66
SCN3A-205ENST00000453007 AP1G2O75843 785 aa10.91□□□□□ -0.66
SCN3A-205ENST00000453007 FOXJ1Q92949 421 aa10.91□□□□□ -0.66
SCN3A-205ENST00000453007 PCMTD1Q96MG8 357 aaPredicted RBP10.91□□□□□ -0.66
SCN3A-205ENST00000453007 SMCPP49901 116 aaPredicted RBP10.9□□□□□ -0.66
SCN3A-205ENST00000453007 FBXO31Q5XUX0 539 aaPredicted RBP10.9□□□□□ -0.66
SCN3A-205ENST00000453007 PPP2R2DQ66LE6 453 aa10.9□□□□□ -0.66
SCN3A-205ENST00000453007 FAM174AQ8TBP5 190 aa10.9□□□□□ -0.66
SCN3A-205ENST00000453007 GOPCQ9HD26 462 aa10.9□□□□□ -0.66
SCN3A-205ENST00000453007 DACH1Q9UI36 760 aa10.9□□□□□ -0.66
SCN3A-205ENST00000453007 NBPF14Q5TI25 921 aa10.89□□□□□ -0.67
SCN3A-205ENST00000453007 BPHLQ86WA6 291 aaPredicted RBP10.89□□□□□ -0.67
SCN3A-205ENST00000453007 LRRN4Q8WUT4 740 aa10.89□□□□□ -0.67
SCN3A-205ENST00000453007 POTECB2RU33 542 aa10.88□□□□□ -0.67
SCN3A-205ENST00000453007 ARID5BQ14865 1188 aa10.87□□□□□ -0.67
SCN3A-205ENST00000453007 RFC5P40937 340 aa10.85□□□□□ -0.67
SCN3A-205ENST00000453007 MAGEB6P1A0A0J9YX57 407 aa10.84□□□□□ -0.67
SCN3A-205ENST00000453007 NR6A1Q15406 480 aa10.84□□□□□ -0.67
SCN3A-205ENST00000453007 GMPR2Q9P2T1 348 aaKnown RBP10.84□□□□□ -0.67
SCN3A-205ENST00000453007 NNTQ13423 1086 aa10.83□□□□□ -0.68
SCN3A-205ENST00000453007 C4orf48Q5BLP8 95 aa10.83□□□□□ -0.68
SCN3A-205ENST00000453007 MPNDQ8N594 471 aa10.83□□□□□ -0.68
SCN3A-205ENST00000453007 CARD14Q9BXL6 1004 aa10.83□□□□□ -0.68
SCN3A-205ENST00000453007 ATP13A2Q9NQ11 1180 aa10.83□□□□□ -0.68
SCN3A-205ENST00000453007 CAPN5O15484 640 aaPredicted RBP10.82□□□□□ -0.68
SCN3A-205ENST00000453007 USP17L8P0C7I0 530 aa10.82□□□□□ -0.68
SCN3A-205ENST00000453007 GPKOWQ92917 476 aaPredicted RBP eCLIP10.82□□□□□ -0.68
SCN3A-205ENST00000453007 C11orf95C9JLR9 678 aaPredicted RBP10.81□□□□□ -0.68
SCN3A-205ENST00000453007 FKBPLQ9UIM3 349 aa10.81□□□□□ -0.68
SCN3A-205ENST00000453007 ADH1CP00326 375 aa10.8□□□□□ -0.68
SCN3A-205ENST00000453007 SH3BP5LQ7L8J4 393 aa10.8□□□□□ -0.68
SCN3A-205ENST00000453007 UBTFP17480 764 aaKnown RBP10.79□□□□□ -0.68
SCN3A-205ENST00000453007 SH3RF1Q7Z6J0 888 aa10.79□□□□□ -0.68
SCN3A-205ENST00000453007 CDK15Q96Q40 435 aa10.79□□□□□ -0.68
SCN3A-205ENST00000453007 PNMA1Q8ND90 353 aa10.78□□□□□ -0.68
SCN3A-205ENST00000453007 ARHGAP9Q9BRR9 750 aa10.78□□□□□ -0.68
SCN3A-205ENST00000453007 TMEM259Q4ZIN3 620 aa10.77□□□□□ -0.69
SCN3A-205ENST00000453007 PDXDC2PQ6P474 469 aa10.77□□□□□ -0.69
SCN3A-205ENST00000453007 ZNF775Q96BV0 537 aaPredicted RBP10.77□□□□□ -0.69
SCN3A-205ENST00000453007 SENP2Q9HC62 589 aa10.77□□□□□ -0.69
SCN3A-205ENST00000453007 HMX1Q9NP08 348 aaPredicted RBP10.77□□□□□ -0.69
SCN3A-205ENST00000453007 BMP1P13497 986 aa10.76□□□□□ -0.69
SCN3A-205ENST00000453007 WDR4P57081 412 aaKnown RBP10.76□□□□□ -0.69
SCN3A-205ENST00000453007 VASH1Q7L8A9 365 aaPredicted RBP10.76□□□□□ -0.69
SCN3A-205ENST00000453007 ZBTB33Q86T24 672 aa10.76□□□□□ -0.69
SCN3A-205ENST00000453007 EPS8L1Q8TE68 723 aa10.76□□□□□ -0.69
SCN3A-205ENST00000453007 C1QTNF2Q9BXJ5 285 aa10.76□□□□□ -0.69
SCN3A-205ENST00000453007 ZC3H4Q9UPT8 1303 aaKnown RBP10.76□□□□□ -0.69
SCN3A-205ENST00000453007 NR5A1Q13285 461 aa10.75□□□□□ -0.69
SCN3A-205ENST00000453007 FSHRP23945 695 aa10.74□□□□□ -0.69
SCN3A-205ENST00000453007 PTK2Q05397 1052 aa10.74□□□□□ -0.69
SCN3A-205ENST00000453007 ERFEQ4G0M1 354 aa10.74□□□□□ -0.69
SCN3A-205ENST00000453007 TRMT44Q8IYL2 757 aaKnown RBP10.73□□□□□ -0.69
SCN3A-205ENST00000453007 KIFC2Q96AC6 838 aa10.73□□□□□ -0.69
SCN3A-205ENST00000453007 NR3C2P08235 984 aa10.72□□□□□ -0.69
SCN3A-205ENST00000453007 TIMP2P16035 220 aa10.72□□□□□ -0.69
SCN3A-205ENST00000453007 GRM5P41594 1212 aa10.72□□□□□ -0.69
SCN3A-205ENST00000453007 SLC10A4Q96EP9 437 aa10.72□□□□□ -0.69
SCN3A-205ENST00000453007 TRIM47Q96LD4 638 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms