RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CCDC61Q9Y6R9 512 aa14.42□□□□□ -0.1
PKP4-206ENST00000452162 PXDNQ92626 1479 aa14.42□□□□□ -0.1
PKP4-206ENST00000452162 SMG6Q86US8 1419 aaKnown RBP14.41□□□□□ -0.1
PKP4-206ENST00000452162 CC2D1BQ5T0F9 858 aaKnown RBP14.4□□□□□ -0.1
PKP4-206ENST00000452162 PPIP5K1Q6PFW1 1433 aa14.4□□□□□ -0.1
PKP4-206ENST00000452162 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
PKP4-206ENST00000452162 KRT28Q7Z3Y7 464 aa14.39□□□□□ -0.11
PKP4-206ENST00000452162 NGDNQ8NEJ9 315 aaKnown RBP14.39□□□□□ -0.11
PKP4-206ENST00000452162 LRRC59Q96AG4 307 aaKnown RBP14.39□□□□□ -0.11
PKP4-206ENST00000452162 CABP1Q9NZU7 370 aa14.39□□□□□ -0.11
PKP4-206ENST00000452162 JCADQ9P266 1359 aa14.39□□□□□ -0.11
PKP4-206ENST00000452162 PLEKHG3A1L390 1219 aa14.38□□□□□ -0.11
PKP4-206ENST00000452162 PSME1Q06323 249 aa14.38□□□□□ -0.11
PKP4-206ENST00000452162 ACEP12821 1306 aa14.38□□□□□ -0.11
PKP4-206ENST00000452162 SHPRHQ149N8 1683 aa14.38□□□□□ -0.11
PKP4-206ENST00000452162 INSRP06213 1382 aa14.37□□□□□ -0.11
PKP4-206ENST00000452162 AMER1Q5JTC6 1135 aaPredicted RBP14.37□□□□□ -0.11
PKP4-206ENST00000452162 TRPM3Q9HCF6 1732 aaPredicted RBP14.37□□□□□ -0.11
PKP4-206ENST00000452162 POLR3AO14802 1390 aaPredicted RBP14.37□□□□□ -0.11
PKP4-206ENST00000452162 ATAD2Q6PL18 1390 aa14.37□□□□□ -0.11
PKP4-206ENST00000452162 NPC1L1Q9UHC9 1359 aa14.37□□□□□ -0.11
PKP4-206ENST00000452162 KNSTRNQ9Y448 316 aa14.36□□□□□ -0.11
PKP4-206ENST00000452162 PNPLA6Q8IY17 1366 aa14.36□□□□□ -0.11
PKP4-206ENST00000452162 NUDCQ9Y266 331 aa14.36□□□□□ -0.11
PKP4-206ENST00000452162 SPATA31A3Q5VYP0 1347 aa14.35□□□□□ -0.11
PKP4-206ENST00000452162 ERICH6BQ5W0A0 696 aa14.34□□□□□ -0.11
PKP4-206ENST00000452162 BLMP54132 1417 aaPredicted RBP14.34□□□□□ -0.11
PKP4-206ENST00000452162 AKAP12Q02952 1782 aa14.34□□□□□ -0.11
PKP4-206ENST00000452162 PUS7Q96PZ0 661 aaKnown RBP14.33□□□□□ -0.11
PKP4-206ENST00000452162 SLC12A5Q9H2X9 1139 aa14.33□□□□□ -0.11
PKP4-206ENST00000452162 SBNO1A3KN83 1393 aa14.33□□□□□ -0.12
PKP4-206ENST00000452162 IRX6P78412 446 aaPredicted RBP14.33□□□□□ -0.12
PKP4-206ENST00000452162 TNS3Q68CZ2 1445 aa14.33□□□□□ -0.12
PKP4-206ENST00000452162 ALS2Q96Q42 1657 aa14.33□□□□□ -0.12
PKP4-206ENST00000452162 MED1Q15648 1581 aaPredicted RBP14.32□□□□□ -0.12
PKP4-206ENST00000452162 PAK3O75914 559 aaPredicted RBP14.32□□□□□ -0.12
PKP4-206ENST00000452162 LMOD2Q6P5Q4 547 aa14.32□□□□□ -0.12
PKP4-206ENST00000452162 NUTM2BA6NNL0 878 aaPredicted RBP14.32□□□□□ -0.12
PKP4-206ENST00000452162 NUTM2EB1AL46 878 aaPredicted RBP14.32□□□□□ -0.12
PKP4-206ENST00000452162 NUTM2AQ8IVF1 878 aaPredicted RBP14.32□□□□□ -0.12
PKP4-206ENST00000452162 LRP6O75581 1613 aa14.32□□□□□ -0.12
PKP4-206ENST00000452162 COL22A1Q8NFW1 1626 aaPredicted RBP14.32□□□□□ -0.12
PKP4-206ENST00000452162 SPATA31A6Q5VVP1 1343 aa14.31□□□□□ -0.12
PKP4-206ENST00000452162 PPP2R1AP30153 589 aa14.31□□□□□ -0.12
PKP4-206ENST00000452162 CD163L1Q9NR16 1453 aa14.31□□□□□ -0.12
PKP4-206ENST00000452162 PLEKHG5O94827 1062 aa14.3□□□□□ -0.12
PKP4-206ENST00000452162 USP6P35125 1406 aa14.3□□□□□ -0.12
PKP4-206ENST00000452162 CPSF1Q10570 1443 aaKnown RBP14.3□□□□□ -0.12
PKP4-206ENST00000452162 RNF123Q5XPI4 1314 aa14.3□□□□□ -0.12
PKP4-206ENST00000452162 MON2Q7Z3U7 1717 aa14.29□□□□□ -0.12
PKP4-206ENST00000452162 SENP3-EIF4A1A0A087X0R7 540 aa14.29□□□□□ -0.12
PKP4-206ENST00000452162 CABLES1Q8TDN4 633 aa14.29□□□□□ -0.12
PKP4-206ENST00000452162 CARD14Q9BXL6 1004 aa14.29□□□□□ -0.12
PKP4-206ENST00000452162 ARHGEF10O15013 1369 aa14.28□□□□□ -0.12
PKP4-206ENST00000452162 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
PKP4-206ENST00000452162 TSHZ2Q9NRE2 1034 aa14.28□□□□□ -0.12
PKP4-206ENST00000452162 SSH2Q76I76 1423 aa14.28□□□□□ -0.12
PKP4-206ENST00000452162 NUTM2GQ5VZR2 741 aa14.27□□□□□ -0.12
PKP4-206ENST00000452162 A0A1W2PP64 1363 aa14.27□□□□□ -0.12
PKP4-206ENST00000452162 ABCA3Q99758 1704 aa14.27□□□□□ -0.13
PKP4-206ENST00000452162 NRKQ7Z2Y5 1582 aa14.27□□□□□ -0.13
PKP4-206ENST00000452162 NINLQ9Y2I6 1382 aa14.26□□□□□ -0.13
PKP4-206ENST00000452162 ADAMTS2O95450 1211 aa14.26□□□□□ -0.13
PKP4-206ENST00000452162 HDGFL2Q7Z4V5 671 aaPredicted RBP14.26□□□□□ -0.13
PKP4-206ENST00000452162 ABTB2Q8N961 1025 aa14.26□□□□□ -0.13
PKP4-206ENST00000452162 TERF2IPQ9NYB0 399 aa14.26□□□□□ -0.13
PKP4-206ENST00000452162 CRYBG1Q9Y4K1 1723 aa14.26□□□□□ -0.13
PKP4-206ENST00000452162 PDE3BQ13370 1112 aa14.25□□□□□ -0.13
PKP4-206ENST00000452162 PPP4R2Q9NY27 417 aa14.25□□□□□ -0.13
PKP4-206ENST00000452162 TTC21BQ7Z4L5 1316 aa14.25□□□□□ -0.13
PKP4-206ENST00000452162 PIK3C2AO00443 1686 aa14.25□□□□□ -0.13
PKP4-206ENST00000452162 MEX3CQ5U5Q3 659 aaKnown RBP14.25□□□□□ -0.13
PKP4-206ENST00000452162 MARF1Q9Y4F3 1742 aaKnown RBP14.25□□□□□ -0.13
PKP4-206ENST00000452162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.24□□□□□ -0.138e-7■■■□□ 15.7
PKP4-206ENST00000452162 ANKRD36BQ8N2N9 1353 aa14.23□□□□□ -0.13
PKP4-206ENST00000452162 ADAMTS8Q9UP79 889 aa14.23□□□□□ -0.13
PKP4-206ENST00000452162 NSD3Q9BZ95 1437 aa14.23□□□□□ -0.13
PKP4-206ENST00000452162 HAP1P54257 671 aaPredicted RBP14.22□□□□□ -0.13
PKP4-206ENST00000452162 PHRF1Q9P1Y6 1649 aaKnown RBP14.22□□□□□ -0.13
PKP4-206ENST00000452162 EDC4Q6P2E9 1401 aaKnown RBP14.22□□□□□ -0.13
PKP4-206ENST00000452162 NLRP6P59044 892 aa14.22□□□□□ -0.13
PKP4-206ENST00000452162 C8orf37Q96NL8 207 aa14.22□□□□□ -0.13
PKP4-206ENST00000452162 PHF23Q9BUL5 403 aaPredicted RBP14.22□□□□□ -0.13
PKP4-206ENST00000452162 TTC21AQ8NDW8 1320 aa14.21□□□□□ -0.13
PKP4-206ENST00000452162 ZRANB1Q9UGI0 708 aa14.21□□□□□ -0.13
PKP4-206ENST00000452162 NME9Q86XW9 330 aa14.2□□□□□ -0.14
PKP4-206ENST00000452162 RGS17Q9UGC6 210 aaPredicted RBP14.2□□□□□ -0.14
PKP4-206ENST00000452162 WDR43Q15061 677 aaKnown RBP eCLIP14.2□□□□□ -0.14
PKP4-206ENST00000452162 SALL2Q9Y467 1007 aaPredicted RBP14.2□□□□□ -0.14
PKP4-206ENST00000452162 USP19O94966 1318 aa14.2□□□□□ -0.14
PKP4-206ENST00000452162 NGLY1Q96IV0 654 aa14.19□□□□□ -0.14
PKP4-206ENST00000452162 AFF2P51816 1311 aa14.18□□□□□ -0.14
PKP4-206ENST00000452162 CDCA7LQ96GN5 454 aa14.17□□□□□ -0.14
PKP4-206ENST00000452162 GCP02774 474 aa14.17□□□□□ -0.14
PKP4-206ENST00000452162 ZC3H6P61129 1189 aaKnown RBP14.17□□□□□ -0.14
PKP4-206ENST00000452162 USP54Q70EL1 1684 aa14.16□□□□□ -0.14
PKP4-206ENST00000452162 FAM83GA6ND36 823 aa14.16□□□□□ -0.14
PKP4-206ENST00000452162 PRKCSHP14314 528 aaPredicted RBP14.16□□□□□ -0.14
PKP4-206ENST00000452162 SLIT3O75094 1523 aa14.16□□□□□ -0.14
PKP4-206ENST00000452162 USP31Q70CQ4 1352 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 1154.2 ms