RNA–Protein interactions for RNA: ENST00000452067.1

NUCKS1P1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1, humanhuman

BASIC

Gene NUCKS1P1, Length 703 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1P1-201ENST00000452067 GFRA3O60609 400 aa12.57□□□□□ -0.4
NUCKS1P1-201ENST00000452067 RFC5P40937 340 aa12.57□□□□□ -0.4
NUCKS1P1-201ENST00000452067 PRR20EP86478 221 aa12.57□□□□□ -0.4
NUCKS1P1-201ENST00000452067 PRR20CP86479 221 aa12.57□□□□□ -0.4
NUCKS1P1-201ENST00000452067 PRR20DP86480 221 aa12.57□□□□□ -0.4
NUCKS1P1-201ENST00000452067 PRR20BP86481 221 aa12.57□□□□□ -0.4
NUCKS1P1-201ENST00000452067 PRR20AP86496 221 aa12.57□□□□□ -0.4
NUCKS1P1-201ENST00000452067 CTHP32929 405 aa12.56□□□□□ -0.4
NUCKS1P1-201ENST00000452067 SKOR1P84550 965 aa12.56□□□□□ -0.4
NUCKS1P1-201ENST00000452067 WNT7BP56706 349 aa12.55□□□□□ -0.4
NUCKS1P1-201ENST00000452067 LAPTM4AQ15012 233 aa12.55□□□□□ -0.4
NUCKS1P1-201ENST00000452067 TNFRSF10AO00220 468 aa12.54□□□□□ -0.4
NUCKS1P1-201ENST00000452067 NRG2O14511 850 aaPredicted RBP12.54□□□□□ -0.4
NUCKS1P1-201ENST00000452067 FOXC1Q12948 553 aa12.54□□□□□ -0.4
NUCKS1P1-201ENST00000452067 WNT7AO00755 349 aa12.53□□□□□ -0.4
NUCKS1P1-201ENST00000452067 AP1G2O75843 785 aa12.53□□□□□ -0.4
NUCKS1P1-201ENST00000452067 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
NUCKS1P1-201ENST00000452067 LRRN4Q8WUT4 740 aa12.52□□□□□ -0.41
NUCKS1P1-201ENST00000452067 BAP1Q92560 729 aa12.51□□□□□ -0.41
NUCKS1P1-201ENST00000452067 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
NUCKS1P1-201ENST00000452067 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
NUCKS1P1-201ENST00000452067 SH3BP2P78314 561 aa12.5□□□□□ -0.41
NUCKS1P1-201ENST00000452067 USP17L8P0C7I0 530 aa12.49□□□□□ -0.41
NUCKS1P1-201ENST00000452067 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
NUCKS1P1-201ENST00000452067 TMEM259Q4ZIN3 620 aa12.49□□□□□ -0.41
NUCKS1P1-201ENST00000452067 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
NUCKS1P1-201ENST00000452067 ZNF511Q8NB15 262 aa12.48□□□□□ -0.41
NUCKS1P1-201ENST00000452067 MRGPRX2Q96LB1 330 aa12.48□□□□□ -0.41
NUCKS1P1-201ENST00000452067 TOR4AQ9NXH8 423 aa12.47□□□□□ -0.41
NUCKS1P1-201ENST00000452067 HMX1Q9NP08 348 aaPredicted RBP12.45□□□□□ -0.42
NUCKS1P1-201ENST00000452067 WIZO95785 1651 aa12.43□□□□□ -0.42
NUCKS1P1-201ENST00000452067 NR6A1Q15406 480 aa12.43□□□□□ -0.42
NUCKS1P1-201ENST00000452067 CYP4X1Q8N118 509 aa12.43□□□□□ -0.42
NUCKS1P1-201ENST00000452067 ARMC2Q8NEN0 867 aa12.43□□□□□ -0.42
NUCKS1P1-201ENST00000452067 Q6ZNB5 142 aa12.42□□□□□ -0.42
NUCKS1P1-201ENST00000452067 EHBP1Q8NDI1 1231 aa12.42□□□□□ -0.42
NUCKS1P1-201ENST00000452067 SIAH2O43255 324 aa12.41□□□□□ -0.42
NUCKS1P1-201ENST00000452067 SNIP1Q8TAD8 396 aaKnown RBP12.41□□□□□ -0.42
NUCKS1P1-201ENST00000452067 EPS8L1Q8TE68 723 aa12.41□□□□□ -0.42
NUCKS1P1-201ENST00000452067 FOXJ1Q92949 421 aa12.41□□□□□ -0.42
NUCKS1P1-201ENST00000452067 NBPF14Q5TI25 921 aa12.4□□□□□ -0.42
NUCKS1P1-201ENST00000452067 BANK1Q8NDB2 785 aa12.4□□□□□ -0.42
NUCKS1P1-201ENST00000452067 PEG3Q9GZU2 1588 aa12.39□□□□□ -0.43
NUCKS1P1-201ENST00000452067 FAM187AA6NFU0 413 aa12.39□□□□□ -0.43
NUCKS1P1-201ENST00000452067 LCE2BO14633 110 aa12.39□□□□□ -0.43
NUCKS1P1-201ENST00000452067 FKBPLQ9UIM3 349 aa12.39□□□□□ -0.43
NUCKS1P1-201ENST00000452067 TTC24A2A3L6 582 aaPredicted RBP12.38□□□□□ -0.43
NUCKS1P1-201ENST00000452067 DGAT1O75907 488 aa12.38□□□□□ -0.43
NUCKS1P1-201ENST00000452067 VARSP26640 1264 aaKnown RBP12.38□□□□□ -0.43
NUCKS1P1-201ENST00000452067 C4orf48Q5BLP8 95 aa12.38□□□□□ -0.43
NUCKS1P1-201ENST00000452067 GPKOWQ92917 476 aaPredicted RBP eCLIP12.38□□□□□ -0.43
NUCKS1P1-201ENST00000452067 TRIM34Q9BYJ4 488 aa12.38□□□□□ -0.43
NUCKS1P1-201ENST00000452067 PKDCCQ504Y2 493 aa12.37□□□□□ -0.43
NUCKS1P1-201ENST00000452067 SH3BP5LQ7L8J4 393 aa12.37□□□□□ -0.43
NUCKS1P1-201ENST00000452067 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
NUCKS1P1-201ENST00000452067 SMPD1P17405 629 aa12.36□□□□□ -0.43
NUCKS1P1-201ENST00000452067 BPHLQ86WA6 291 aaPredicted RBP12.36□□□□□ -0.43
NUCKS1P1-201ENST00000452067 GJD4Q96KN9 370 aaPredicted RBP12.36□□□□□ -0.43
NUCKS1P1-201ENST00000452067 ZC3H4Q9UPT8 1303 aaKnown RBP12.36□□□□□ -0.43
NUCKS1P1-201ENST00000452067 J3QL48 77 aa12.35□□□□□ -0.43
NUCKS1P1-201ENST00000452067 SH3RF1Q7Z6J0 888 aa12.35□□□□□ -0.43
NUCKS1P1-201ENST00000452067 SOCS7O14512 581 aa12.34□□□□□ -0.43
NUCKS1P1-201ENST00000452067 MTMR14Q8NCE2 650 aa12.34□□□□□ -0.43
NUCKS1P1-201ENST00000452067 AGERQ15109 404 aa12.33□□□□□ -0.44
NUCKS1P1-201ENST00000452067 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
NUCKS1P1-201ENST00000452067 FAM174AQ8TBP5 190 aa12.33□□□□□ -0.44
NUCKS1P1-201ENST00000452067 C1QTNF2Q9BXJ5 285 aa12.33□□□□□ -0.44
NUCKS1P1-201ENST00000452067 SNRKQ9NRH2 765 aa12.33□□□□□ -0.44
NUCKS1P1-201ENST00000452067 TLL2Q9Y6L7 1015 aa12.33□□□□□ -0.44
NUCKS1P1-201ENST00000452067 SMARCA2P51531 1590 aa12.32□□□□□ -0.44
NUCKS1P1-201ENST00000452067 ALDH1A1P00352 501 aa12.32□□□□□ -0.44
NUCKS1P1-201ENST00000452067 TRAF7Q6Q0C0 670 aa12.32□□□□□ -0.44
NUCKS1P1-201ENST00000452067 MPNDQ8N594 471 aa12.32□□□□□ -0.44
NUCKS1P1-201ENST00000452067 AVPP01185 164 aa12.31□□□□□ -0.44
NUCKS1P1-201ENST00000452067 MYT1Q01538 1121 aa12.31□□□□□ -0.44
NUCKS1P1-201ENST00000452067 TMEM132AQ24JP5 1023 aa12.31□□□□□ -0.44
NUCKS1P1-201ENST00000452067 PNMA1Q8ND90 353 aa12.3□□□□□ -0.44
NUCKS1P1-201ENST00000452067 OCSTAMPQ9BR26 566 aa12.29□□□□□ -0.44
NUCKS1P1-201ENST00000452067 MAGEB6P1A0A0J9YX57 407 aa12.28□□□□□ -0.44
NUCKS1P1-201ENST00000452067 CDK15Q96Q40 435 aa12.28□□□□□ -0.44
NUCKS1P1-201ENST00000452067 ARHGAP9Q9BRR9 750 aa12.28□□□□□ -0.44
NUCKS1P1-201ENST00000452067 GPSM3Q9Y4H4 160 aa12.28□□□□□ -0.44
NUCKS1P1-201ENST00000452067 TRMT44Q8IYL2 757 aaKnown RBP12.27□□□□□ -0.45
NUCKS1P1-201ENST00000452067 CARD14Q9BXL6 1004 aa12.27□□□□□ -0.45
NUCKS1P1-201ENST00000452067 GPR37L1O60883 481 aa12.26□□□□□ -0.45
NUCKS1P1-201ENST00000452067 ERFEQ4G0M1 354 aa12.26□□□□□ -0.45
NUCKS1P1-201ENST00000452067 CRIPAKQ8N1N5 446 aa12.26□□□□□ -0.45
NUCKS1P1-201ENST00000452067 HPS1Q92902 700 aa12.26□□□□□ -0.45
NUCKS1P1-201ENST00000452067 EIF4G1Q04637 1599 aaKnown RBP12.26□□□□□ -0.45
NUCKS1P1-201ENST00000452067 PTK2Q05397 1052 aa12.25□□□□□ -0.45
NUCKS1P1-201ENST00000452067 WASF2Q9Y6W5 498 aa12.25□□□□□ -0.45
NUCKS1P1-201ENST00000452067 ATAD2BQ9ULI0 1458 aa12.24□□□□□ -0.45
NUCKS1P1-201ENST00000452067 APBB1O00213 710 aa12.23□□□□□ -0.45
NUCKS1P1-201ENST00000452067 ST8SIA5O15466 376 aa12.23□□□□□ -0.45
NUCKS1P1-201ENST00000452067 ADH1CP00326 375 aa12.23□□□□□ -0.45
NUCKS1P1-201ENST00000452067 SMCPP49901 116 aaPredicted RBP12.23□□□□□ -0.45
NUCKS1P1-201ENST00000452067 AAASQ9NRG9 546 aa12.23□□□□□ -0.45
NUCKS1P1-201ENST00000452067 NDUFB9Q9Y6M9 179 aa12.23□□□□□ -0.45
NUCKS1P1-201ENST00000452067 ARID5BQ14865 1188 aa12.22□□□□□ -0.45
NUCKS1P1-201ENST00000452067 CTC1Q2NKJ3 1217 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms