RNA–Protein interactions for RNA: ENST00000451285.1

LINC02543-201, Transcript of long intergenic non-protein coding RNA 2543, humanhuman

TSL 1 (best) BASIC

Gene LINC02543, Length 845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02543-201ENST00000451285 EIF3AQ14152 1382 aaKnown RBP13.39□□□□□ -0.27
LINC02543-201ENST00000451285 COL14A1Q05707 1796 aaKnown RBP13.39□□□□□ -0.27
LINC02543-201ENST00000451285 POLR3AO14802 1390 aaPredicted RBP13.38□□□□□ -0.27
LINC02543-201ENST00000451285 GPRASP1Q5JY77 1395 aa13.38□□□□□ -0.27
LINC02543-201ENST00000451285 NBPF8Q3BBV2 869 aa13.38□□□□□ -0.27
LINC02543-201ENST00000451285 NGDNQ8NEJ9 315 aaKnown RBP13.38□□□□□ -0.27
LINC02543-201ENST00000451285 BTG4Q9NY30 223 aa13.38□□□□□ -0.27
LINC02543-201ENST00000451285 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
LINC02543-201ENST00000451285 ACEP12821 1306 aa13.37□□□□□ -0.27
LINC02543-201ENST00000451285 L3MBTL2Q969R5 705 aa13.36□□□□□ -0.27
LINC02543-201ENST00000451285 SIN3AQ96ST3 1273 aa13.36□□□□□ -0.27
LINC02543-201ENST00000451285 CCDC61Q9Y6R9 512 aa13.36□□□□□ -0.27
LINC02543-201ENST00000451285 SPATA31A5Q5VU36 1347 aa13.35□□□□□ -0.27
LINC02543-201ENST00000451285 SPATA31A7Q8IWB4 1347 aa13.35□□□□□ -0.27
LINC02543-201ENST00000451285 PHRF1Q9P1Y6 1649 aaKnown RBP13.35□□□□□ -0.27
LINC02543-201ENST00000451285 BLMP54132 1417 aaPredicted RBP13.34□□□□□ -0.27
LINC02543-201ENST00000451285 PAK3O75914 559 aaPredicted RBP13.34□□□□□ -0.27
LINC02543-201ENST00000451285 DEFB132Q7Z7B7 95 aa13.34□□□□□ -0.27
LINC02543-201ENST00000451285 FAM98CQ17RN3 349 aaKnown RBP13.33□□□□□ -0.28
LINC02543-201ENST00000451285 KRT27Q7Z3Y8 459 aa13.33□□□□□ -0.28
LINC02543-201ENST00000451285 KIAA0232Q92628 1395 aa13.32□□□□□ -0.28
LINC02543-201ENST00000451285 THSD7AQ9UPZ6 1657 aa13.32□□□□□ -0.28
LINC02543-201ENST00000451285 CHRNA2Q15822 529 aa13.32□□□□□ -0.28
LINC02543-201ENST00000451285 NUTM2GQ5VZR2 741 aa13.32□□□□□ -0.28
LINC02543-201ENST00000451285 CCDC9Q9Y3X0 531 aaKnown RBP13.32□□□□□ -0.28
LINC02543-201ENST00000451285 TRPM1Q7Z4N2 1603 aa13.31□□□□□ -0.28
LINC02543-201ENST00000451285 CABP2Q9NPB3 220 aa13.31□□□□□ -0.28
LINC02543-201ENST00000451285 CENPJQ9HC77 1338 aaPredicted RBP13.31□□□□□ -0.28
LINC02543-201ENST00000451285 QRICH2Q9H0J4 1663 aa13.31□□□□□ -0.28
LINC02543-201ENST00000451285 ZC3H6P61129 1189 aaKnown RBP13.3□□□□□ -0.28
LINC02543-201ENST00000451285 FAM182BQ5T319 152 aa13.3□□□□□ -0.28
LINC02543-201ENST00000451285 PRDM11Q9NQV5 511 aa13.3□□□□□ -0.28
LINC02543-201ENST00000451285 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
LINC02543-201ENST00000451285 SPATA31A1Q5TZJ5 1347 aa13.3□□□□□ -0.28
LINC02543-201ENST00000451285 LMO7Q8WWI1 1683 aa13.3□□□□□ -0.28
LINC02543-201ENST00000451285 CAMTA1Q9Y6Y1 1673 aa13.3□□□□□ -0.28
LINC02543-201ENST00000451285 SSH2Q76I76 1423 aa13.3□□□□□ -0.28
LINC02543-201ENST00000451285 USP19O94966 1318 aa13.29□□□□□ -0.28
LINC02543-201ENST00000451285 NRKQ7Z2Y5 1582 aa13.28□□□□□ -0.28
LINC02543-201ENST00000451285 CABP1Q9NZU7 370 aa13.28□□□□□ -0.28
LINC02543-201ENST00000451285 PPIP5K1Q6PFW1 1433 aa13.28□□□□□ -0.28
LINC02543-201ENST00000451285 ABTB2Q8N961 1025 aa13.27□□□□□ -0.29
LINC02543-201ENST00000451285 CPDO75976 1380 aa13.27□□□□□ -0.29
LINC02543-201ENST00000451285 GCP02774 474 aa13.26□□□□□ -0.29
LINC02543-201ENST00000451285 COL18A1P39060 1754 aa13.26□□□□□ -0.29
LINC02543-201ENST00000451285 SRPK2P78362 688 aaKnown RBP13.26□□□□□ -0.29
LINC02543-201ENST00000451285 TNS1Q9HBL0 1735 aaKnown RBP13.25□□□□□ -0.29
LINC02543-201ENST00000451285 NEUROD1Q13562 356 aa13.25□□□□□ -0.29
LINC02543-201ENST00000451285 LARP1Q6PKG0 1096 aaKnown RBP13.25□□□□□ -0.29
LINC02543-201ENST00000451285 USP6P35125 1406 aa13.24□□□□□ -0.29
LINC02543-201ENST00000451285 BRD4O60885 1362 aaPredicted RBP13.24□□□□□ -0.29
LINC02543-201ENST00000451285 BARGINQ6ZT62 677 aa13.24□□□□□ -0.29
LINC02543-201ENST00000451285 NLRP13Q86W25 1043 aa13.24□□□□□ -0.29
LINC02543-201ENST00000451285 STRN4Q9NRL3 753 aa13.24□□□□□ -0.29
LINC02543-201ENST00000451285 AKAP12Q02952 1782 aa13.24□□□□□ -0.29
LINC02543-201ENST00000451285 RGPD1P0DJD0 1748 aa13.24□□□□□ -0.29
LINC02543-201ENST00000451285 EN1Q05925 392 aaPredicted RBP13.23□□□□□ -0.29
LINC02543-201ENST00000451285 PIK3C2AO00443 1686 aa13.23□□□□□ -0.29
LINC02543-201ENST00000451285 SLIT3O75094 1523 aa13.22□□□□□ -0.29
LINC02543-201ENST00000451285 RGPD5Q99666 1765 aa13.22□□□□□ -0.29
LINC02543-201ENST00000451285 DISP2A7MBM2 1401 aa13.22□□□□□ -0.29
LINC02543-201ENST00000451285 A0A0G2JS52 829 aa13.21□□□□□ -0.29
LINC02543-201ENST00000451285 MYT1Q01538 1121 aa13.21□□□□□ -0.29
LINC02543-201ENST00000451285 SF3B2Q13435 895 aaKnown RBP13.21□□□□□ -0.29
LINC02543-201ENST00000451285 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
LINC02543-201ENST00000451285 CPSF1Q10570 1443 aaKnown RBP13.21□□□□□ -0.3
LINC02543-201ENST00000451285 EVC2Q86UK5 1308 aa13.2□□□□□ -0.3
LINC02543-201ENST00000451285 BAG6P46379 1132 aa13.2□□□□□ -0.3
LINC02543-201ENST00000451285 EVA1CP58658 441 aa13.2□□□□□ -0.3
LINC02543-201ENST00000451285 NLRP6P59044 892 aa13.2□□□□□ -0.3
LINC02543-201ENST00000451285 CAMKK2Q96RR4 588 aa13.2□□□□□ -0.3
LINC02543-201ENST00000451285 USP35Q9P2H5 1018 aa13.2□□□□□ -0.3
LINC02543-201ENST00000451285 COL5A2P05997 1499 aaPredicted RBP13.2□□□□□ -0.3
LINC02543-201ENST00000451285 TTC21BQ7Z4L5 1316 aa13.19□□□□□ -0.3
LINC02543-201ENST00000451285 EZH2Q15910 746 aaKnown RBP13.19□□□□□ -0.3
LINC02543-201ENST00000451285 FAM196AQ6ZSG2 479 aa13.19□□□□□ -0.3
LINC02543-201ENST00000451285 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
LINC02543-201ENST00000451285 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
LINC02543-201ENST00000451285 ROCK2O75116 1388 aaKnown RBP13.19□□□□□ -0.3
LINC02543-201ENST00000451285 AATKQ6ZMQ8 1374 aa13.19□□□□□ -0.3
LINC02543-201ENST00000451285 SBF2Q86WG5 1849 aa13.18□□□□□ -0.3
LINC02543-201ENST00000451285 TRIM37O94972 964 aa13.18□□□□□ -0.3
LINC02543-201ENST00000451285 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
LINC02543-201ENST00000451285 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
LINC02543-201ENST00000451285 PEAK1Q9H792 1746 aa13.17□□□□□ -0.3
LINC02543-201ENST00000451285 PSDA5PKW4 1024 aaPredicted RBP13.17□□□□□ -0.3
LINC02543-201ENST00000451285 ARHGEF25Q86VW2 580 aa13.17□□□□□ -0.3
LINC02543-201ENST00000451285 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
LINC02543-201ENST00000451285 LRP5O75197 1615 aa13.16□□□□□ -0.3
LINC02543-201ENST00000451285 SBNO2Q9Y2G9 1366 aa13.16□□□□□ -0.3
LINC02543-201ENST00000451285 MON2Q7Z3U7 1717 aa13.16□□□□□ -0.3
LINC02543-201ENST00000451285 CRB1P82279 1406 aa13.15□□□□□ -0.3
LINC02543-201ENST00000451285 RREB1Q92766 1687 aa13.15□□□□□ -0.31
LINC02543-201ENST00000451285 NFAT5O94916 1531 aa13.14□□□□□ -0.31
LINC02543-201ENST00000451285 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
LINC02543-201ENST00000451285 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
LINC02543-201ENST00000451285 USP54Q70EL1 1684 aa13.13□□□□□ -0.31
LINC02543-201ENST00000451285 PDE3BQ13370 1112 aa13.13□□□□□ -0.31
LINC02543-201ENST00000451285 USP31Q70CQ4 1352 aa13.12□□□□□ -0.31
LINC02543-201ENST00000451285 APBA3O96018 575 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms