RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 LRPPRCP42704 1394 aaKnown RBP12.45□□□□□ -0.42
LINC01961-201ENST00000449954 PARD3Q8TEW0 1356 aa12.45□□□□□ -0.42
LINC01961-201ENST00000449954 GALR2O43603 387 aaPredicted RBP12.45□□□□□ -0.42
LINC01961-201ENST00000449954 PRAG1Q86YV5 1406 aa12.45□□□□□ -0.42
LINC01961-201ENST00000449954 PLCH1Q4KWH8 1693 aa12.45□□□□□ -0.42
LINC01961-201ENST00000449954 DCBLD2Q96PD2 775 aa12.44□□□□□ -0.42
LINC01961-201ENST00000449954 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
LINC01961-201ENST00000449954 CCDC61Q9Y6R9 512 aa12.44□□□□□ -0.42
LINC01961-201ENST00000449954 E9PCH4 1651 aa12.43□□□□□ -0.42
LINC01961-201ENST00000449954 A0A0G2JS52 829 aa12.43□□□□□ -0.42
LINC01961-201ENST00000449954 MYT1Q01538 1121 aa12.43□□□□□ -0.42
LINC01961-201ENST00000449954 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
LINC01961-201ENST00000449954 CCDC9Q9Y3X0 531 aaKnown RBP12.42□□□□□ -0.42
LINC01961-201ENST00000449954 SPON1Q9HCB6 807 aa12.41□□□□□ -0.42
LINC01961-201ENST00000449954 ANKRD50Q9ULJ7 1429 aa12.41□□□□□ -0.42
LINC01961-201ENST00000449954 HFM1A2PYH4 1435 aa12.4□□□□□ -0.42
LINC01961-201ENST00000449954 EZH2Q15910 746 aaKnown RBP12.4□□□□□ -0.42
LINC01961-201ENST00000449954 ESCO1Q5FWF5 840 aa12.4□□□□□ -0.42
LINC01961-201ENST00000449954 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
LINC01961-201ENST00000449954 RREB1Q92766 1687 aa12.39□□□□□ -0.43
LINC01961-201ENST00000449954 CAMTA1Q9Y6Y1 1673 aa12.39□□□□□ -0.43
LINC01961-201ENST00000449954 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
LINC01961-201ENST00000449954 ROBO2Q9HCK4 1378 aa12.39□□□□□ -0.43
LINC01961-201ENST00000449954 CCDC144AA2RUR9 1427 aa12.38□□□□□ -0.43
LINC01961-201ENST00000449954 FOXO3O43524 673 aa12.38□□□□□ -0.43
LINC01961-201ENST00000449954 CAMKK2Q96RR4 588 aa12.38□□□□□ -0.43
LINC01961-201ENST00000449954 CHIC2Q9UKJ5 165 aa12.38□□□□□ -0.43
LINC01961-201ENST00000449954 SPATA31A3Q5VYP0 1347 aa12.37□□□□□ -0.43
LINC01961-201ENST00000449954 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
LINC01961-201ENST00000449954 HAP1P54257 671 aaPredicted RBP12.37□□□□□ -0.43
LINC01961-201ENST00000449954 XPCQ01831 940 aaPredicted RBP12.37□□□□□ -0.43
LINC01961-201ENST00000449954 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
LINC01961-201ENST00000449954 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
LINC01961-201ENST00000449954 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
LINC01961-201ENST00000449954 KIF1AQ12756 1690 aa12.36□□□□□ -0.43
LINC01961-201ENST00000449954 KCNQ2O43526 872 aa12.36□□□□□ -0.43
LINC01961-201ENST00000449954 FAM98CQ17RN3 349 aaKnown RBP12.36□□□□□ -0.43
LINC01961-201ENST00000449954 NBPF8Q3BBV2 869 aa12.36□□□□□ -0.43
LINC01961-201ENST00000449954 NBPF14Q5TI25 921 aa12.36□□□□□ -0.43
LINC01961-201ENST00000449954 NRAPQ86VF7 1730 aa12.35□□□□□ -0.43
LINC01961-201ENST00000449954 IFNLR1Q8IU57 520 aaPredicted RBP12.35□□□□□ -0.43
LINC01961-201ENST00000449954 NEXMIFQ5QGS0 1516 aa12.35□□□□□ -0.43
LINC01961-201ENST00000449954 THSD7AQ9UPZ6 1657 aa12.35□□□□□ -0.43
LINC01961-201ENST00000449954 ABCA3Q99758 1704 aa12.34□□□□□ -0.43
LINC01961-201ENST00000449954 ZNF326Q5BKZ1 582 aaKnown RBP12.34□□□□□ -0.43
LINC01961-201ENST00000449954 KANK4Q5T7N3 995 aaPredicted RBP12.34□□□□□ -0.43
LINC01961-201ENST00000449954 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
LINC01961-201ENST00000449954 VPS8Q8N3P4 1428 aa12.34□□□□□ -0.43
LINC01961-201ENST00000449954 CHD4Q14839 1912 aa12.33□□□□□ -0.44
LINC01961-201ENST00000449954 MAP3K13O43283 966 aa12.33□□□□□ -0.44
LINC01961-201ENST00000449954 APBA3O96018 575 aa12.31□□□□□ -0.44
LINC01961-201ENST00000449954 FAM182BQ5T319 152 aa12.31□□□□□ -0.44
LINC01961-201ENST00000449954 FAM196AQ6ZSG2 479 aa12.31□□□□□ -0.44
LINC01961-201ENST00000449954 GIGYF1O75420 1035 aaPredicted RBP12.3□□□□□ -0.44
LINC01961-201ENST00000449954 TRIM37O94972 964 aa12.3□□□□□ -0.44
LINC01961-201ENST00000449954 NRKQ7Z2Y5 1582 aa12.3□□□□□ -0.44
LINC01961-201ENST00000449954 ARHGEF10O15013 1369 aa12.3□□□□□ -0.44
LINC01961-201ENST00000449954 SPOCK2Q92563 424 aa12.29□□□□□ -0.44
LINC01961-201ENST00000449954 NAIPQ13075 1403 aa12.28□□□□□ -0.44
LINC01961-201ENST00000449954 RRBP1Q9P2E9 1410 aaKnown RBP12.28□□□□□ -0.44
LINC01961-201ENST00000449954 COL14A1Q05707 1796 aaKnown RBP12.28□□□□□ -0.44
LINC01961-201ENST00000449954 PSME1Q06323 249 aa12.27□□□□□ -0.45
LINC01961-201ENST00000449954 KRT28Q7Z3Y7 464 aa12.27□□□□□ -0.45
LINC01961-201ENST00000449954 SPATA31A5Q5VU36 1347 aa12.27□□□□□ -0.45
LINC01961-201ENST00000449954 SPATA31A7Q8IWB4 1347 aa12.27□□□□□ -0.45
LINC01961-201ENST00000449954 SBNO1A3KN83 1393 aa12.27□□□□□ -0.45
LINC01961-201ENST00000449954 FMN2Q9NZ56 1722 aa12.26□□□□□ -0.45
LINC01961-201ENST00000449954 FAM83GA6ND36 823 aa12.26□□□□□ -0.45
LINC01961-201ENST00000449954 CABLES1Q8TDN4 633 aa12.26□□□□□ -0.45
LINC01961-201ENST00000449954 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
LINC01961-201ENST00000449954 PCDHB13Q9Y5F0 798 aa12.26□□□□□ -0.45
LINC01961-201ENST00000449954 CASZ1Q86V15 1759 aa12.25□□□□□ -0.45
LINC01961-201ENST00000449954 PYGBP11216 843 aa12.25□□□□□ -0.45
LINC01961-201ENST00000449954 GSE1Q14687 1217 aa12.25□□□□□ -0.45
LINC01961-201ENST00000449954 MYOM1P52179 1685 aa12.25□□□□□ -0.45
LINC01961-201ENST00000449954 RGPD3A6NKT7 1758 aaPredicted RBP12.24□□□□□ -0.45
LINC01961-201ENST00000449954 VGFO15240 615 aaPredicted RBP12.24□□□□□ -0.45
LINC01961-201ENST00000449954 RGPD4Q7Z3J3 1758 aa12.24□□□□□ -0.45
LINC01961-201ENST00000449954 DLC1Q96QB1 1528 aa12.23□□□□□ -0.45
LINC01961-201ENST00000449954 CLTCL1P53675 1640 aa12.22□□□□□ -0.45
LINC01961-201ENST00000449954 TECPR2O15040 1411 aa12.22□□□□□ -0.45
LINC01961-201ENST00000449954 NUP155O75694 1391 aa12.22□□□□□ -0.45
LINC01961-201ENST00000449954 NUTM2FA1L443 756 aa12.22□□□□□ -0.45
LINC01961-201ENST00000449954 KIF1BO60333 1816 aa12.22□□□□□ -0.45
LINC01961-201ENST00000449954 SGIP1Q9BQI5 828 aa12.21□□□□□ -0.45
LINC01961-201ENST00000449954 CIZ1Q9ULV3 898 aaPredicted RBP12.21□□□□□ -0.45
LINC01961-201ENST00000449954 NRXN1Q9ULB1 1477 aa12.21□□□□□ -0.46
LINC01961-201ENST00000449954 GOLGB1Q14789 3259 aaKnown RBP12.21□□□□□ -0.46
LINC01961-201ENST00000449954 LMOD2Q6P5Q4 547 aa12.2□□□□□ -0.46
LINC01961-201ENST00000449954 TRPC6Q9Y210 931 aa12.2□□□□□ -0.46
LINC01961-201ENST00000449954 SPATA31A1Q5TZJ5 1347 aa12.19□□□□□ -0.46
LINC01961-201ENST00000449954 C11orf95C9JLR9 678 aaPredicted RBP12.19□□□□□ -0.46
LINC01961-201ENST00000449954 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
LINC01961-201ENST00000449954 SYT17Q9BSW7 474 aa12.19□□□□□ -0.46
LINC01961-201ENST00000449954 KNDC1Q76NI1 1749 aa12.19□□□□□ -0.46
LINC01961-201ENST00000449954 PTGER2P43116 358 aa12.18□□□□□ -0.46
LINC01961-201ENST00000449954 ASTLQ6HA08 431 aaPredicted RBP12.18□□□□□ -0.46
LINC01961-201ENST00000449954 IFNL1Q8IU54 200 aa12.18□□□□□ -0.46
LINC01961-201ENST00000449954 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
LINC01961-201ENST00000449954 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms