RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 AKAP12Q02952 1782 aa28.52■■■□□ 2.16
NPAS1-202ENST00000449844 CPSF1Q10570 1443 aaKnown RBP28.51■■■□□ 2.15
NPAS1-202ENST00000449844 MTHFSP49914 203 aa28.51■■■□□ 2.15
NPAS1-202ENST00000449844 MON2Q7Z3U7 1717 aa28.51■■■□□ 2.15
NPAS1-202ENST00000449844 PIK3R4Q99570 1358 aa28.5■■■□□ 2.15
NPAS1-202ENST00000449844 TOPAZ1Q8N9V7 1692 aa28.5■■■□□ 2.15
NPAS1-202ENST00000449844 NKTRP30414 1462 aaKnown RBP28.49■■■□□ 2.15
NPAS1-202ENST00000449844 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.48■■■□□ 2.15
NPAS1-202ENST00000449844 EDC4Q6P2E9 1401 aaKnown RBP28.48■■■□□ 2.15
NPAS1-202ENST00000449844 PRR36Q9H6K5 1346 aa28.48■■■□□ 2.15
NPAS1-202ENST00000449844 RUNDC1Q96C34 613 aa28.47■■■□□ 2.15
NPAS1-202ENST00000449844 CRBNQ96SW2 442 aa28.47■■■□□ 2.15
NPAS1-202ENST00000449844 NCKAP5LQ9HCH0 1330 aa28.46■■■□□ 2.15
NPAS1-202ENST00000449844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.46■■■□□ 2.15
NPAS1-202ENST00000449844 IQSEC2Q5JU85 1478 aa28.44■■■□□ 2.14
NPAS1-202ENST00000449844 CHD2O14647 1828 aaKnown RBP28.43■■■□□ 2.14
NPAS1-202ENST00000449844 SPINK5Q9NQ38 1064 aaPredicted RBP28.43■■■□□ 2.14
NPAS1-202ENST00000449844 NCBP3Q53F19 620 aaKnown RBP28.42■■■□□ 2.14
NPAS1-202ENST00000449844 WWC1Q8IX03 1113 aa28.42■■■□□ 2.14
NPAS1-202ENST00000449844 KCNA6P17658 529 aa28.41■■■□□ 2.14
NPAS1-202ENST00000449844 ANP32EQ9BTT0 268 aa28.4■■■□□ 2.14
NPAS1-202ENST00000449844 ZNF692Q9BU19 519 aaPredicted RBP28.39■■■□□ 2.14
NPAS1-202ENST00000449844 NUTM2FA1L443 756 aa28.38■■■□□ 2.13
NPAS1-202ENST00000449844 C20orf194Q5TEA3 1177 aa28.38■■■□□ 2.13
NPAS1-202ENST00000449844 PHF23Q9BUL5 403 aaPredicted RBP28.38■■■□□ 2.13
NPAS1-202ENST00000449844 TCERG1O14776 1098 aaKnown RBP28.37■■■□□ 2.13
NPAS1-202ENST00000449844 NPHP4O75161 1426 aaPredicted RBP28.36■■■□□ 2.13
NPAS1-202ENST00000449844 TCP11L2Q8N4U5 519 aa28.36■■■□□ 2.13
NPAS1-202ENST00000449844 NRKQ7Z2Y5 1582 aa28.36■■■□□ 2.13
NPAS1-202ENST00000449844 CCDC27Q2M243 656 aa28.36■■■□□ 2.13
NPAS1-202ENST00000449844 DMRT2Q9Y5R5 561 aa28.35■■■□□ 2.13
NPAS1-202ENST00000449844 COL3A1P02461 1466 aaPredicted RBP28.35■■■□□ 2.13
NPAS1-202ENST00000449844 PLEKHG3A1L390 1219 aa28.35■■■□□ 2.13
NPAS1-202ENST00000449844 NME9Q86XW9 330 aa28.34■■■□□ 2.13
NPAS1-202ENST00000449844 WDR63Q8IWG1 891 aa28.34■■■□□ 2.13
NPAS1-202ENST00000449844 RGPD8O14715 1765 aaPredicted RBP28.34■■■□□ 2.13
NPAS1-202ENST00000449844 MSH5O43196 834 aa28.33■■■□□ 2.13
NPAS1-202ENST00000449844 ACEP12821 1306 aa28.33■■■□□ 2.13
NPAS1-202ENST00000449844 MAP2P11137 1827 aaKnown RBP28.32■■■□□ 2.12
NPAS1-202ENST00000449844 FMN2Q9NZ56 1722 aa28.31■■■□□ 2.12
NPAS1-202ENST00000449844 NALCNQ8IZF0 1738 aa28.3■■■□□ 2.12
NPAS1-202ENST00000449844 U2AF1L5P0DN76 240 aaPredicted RBP28.29■■■□□ 2.12
NPAS1-202ENST00000449844 MS4A1P11836 297 aa28.29■■■□□ 2.12
NPAS1-202ENST00000449844 U2AF1Q01081 240 aaKnown RBP eCLIP28.29■■■□□ 2.12
NPAS1-202ENST00000449844 COG3Q96JB2 828 aa28.29■■■□□ 2.12
NPAS1-202ENST00000449844 USP6P35125 1406 aa28.29■■■□□ 2.12
NPAS1-202ENST00000449844 ANKARQ7Z5J8 1434 aa28.28■■■□□ 2.12
NPAS1-202ENST00000449844 PNPLA6Q8IY17 1366 aa28.27■■■□□ 2.12
NPAS1-202ENST00000449844 ZRANB1Q9UGI0 708 aa28.26■■■□□ 2.12
NPAS1-202ENST00000449844 RRP7AQ9Y3A4 280 aaKnown RBP28.26■■■□□ 2.12
NPAS1-202ENST00000449844 NEUROD2Q15784 382 aa28.26■■■□□ 2.11
NPAS1-202ENST00000449844 TTC21BQ7Z4L5 1316 aa28.26■■■□□ 2.11
NPAS1-202ENST00000449844 KDM2BQ8NHM5 1336 aa28.25■■■□□ 2.11
NPAS1-202ENST00000449844 BCAR3O75815 825 aa28.25■■■□□ 2.11
NPAS1-202ENST00000449844 POLKQ9UBT6 870 aa28.25■■■□□ 2.11
NPAS1-202ENST00000449844 AATKQ6ZMQ8 1374 aa28.23■■■□□ 2.11
NPAS1-202ENST00000449844 U2SURPO15042 1029 aaKnown RBP28.23■■■□□ 2.11
NPAS1-202ENST00000449844 DIAPH1O60610 1272 aaKnown RBP28.23■■■□□ 2.11
NPAS1-202ENST00000449844 CENPQQ7L2Z9 268 aaPredicted RBP28.23■■■□□ 2.11
NPAS1-202ENST00000449844 PMFBP1Q8TBY8 1022 aa28.23■■■□□ 2.11
NPAS1-202ENST00000449844 PPM1GO15355 546 aaPredicted RBP28.21■■■□□ 2.11
NPAS1-202ENST00000449844 FBLN1P23142 703 aa28.21■■■□□ 2.11
NPAS1-202ENST00000449844 PDE3AQ14432 1141 aa28.21■■■□□ 2.11
NPAS1-202ENST00000449844 NWD1Q149M9 1564 aa28.2■■■□□ 2.11
NPAS1-202ENST00000449844 NGDNQ8NEJ9 315 aaKnown RBP28.2■■■□□ 2.11
NPAS1-202ENST00000449844 CDK12Q9NYV4 1490 aaPredicted RBP28.2■■■□□ 2.1
NPAS1-202ENST00000449844 SSH2Q76I76 1423 aa28.19■■■□□ 2.1
NPAS1-202ENST00000449844 PLEKHF1Q96S99 279 aa28.19■■■□□ 2.1
NPAS1-202ENST00000449844 MYH16Q9H6N6 1097 aa28.19■■■□□ 2.1
NPAS1-202ENST00000449844 OVOS2A0A0J9YW53 1432 aa28.18■■■□□ 2.1
NPAS1-202ENST00000449844 OVOS2Q6IE36 1432 aa28.18■■■□□ 2.1
NPAS1-202ENST00000449844 ADGRL3Q9HAR2 1447 aa28.18■■■□□ 2.1
NPAS1-202ENST00000449844 EMILIN1Q9Y6C2 1016 aa28.18■■■□□ 2.1
NPAS1-202ENST00000449844 TTC21AQ8NDW8 1320 aa28.17■■■□□ 2.1
NPAS1-202ENST00000449844 PNNQ9H307 717 aaKnown RBP28.16■■■□□ 2.1
NPAS1-202ENST00000449844 ANP32AP39687 249 aaKnown RBP28.14■■■□□ 2.1
NPAS1-202ENST00000449844 RARSP54136 660 aaKnown RBP28.14■■■□□ 2.1
NPAS1-202ENST00000449844 PDE4AP27815 886 aa28.14■■■□□ 2.09
NPAS1-202ENST00000449844 ERICH6Q7L0X2 663 aa28.14■■■□□ 2.09
NPAS1-202ENST00000449844 RBM33Q96EV2 1170 aaKnown RBP28.14■■■□□ 2.09
NPAS1-202ENST00000449844 MAPK8IP3Q9UPT6 1336 aa28.13■■■□□ 2.09
NPAS1-202ENST00000449844 TMPOP42166 694 aaKnown RBP28.12■■■□□ 2.09
NPAS1-202ENST00000449844 RRS1Q15050 365 aaKnown RBP28.12■■■□□ 2.09
NPAS1-202ENST00000449844 BACH2Q9BYV9 841 aa28.12■■■□□ 2.09
NPAS1-202ENST00000449844 CT47B1P0C2W7 299 aaPredicted RBP28.11■■■□□ 2.09
NPAS1-202ENST00000449844 CANXP27824 592 aaKnown RBP28.11■■■□□ 2.09
NPAS1-202ENST00000449844 PIK3C2AO00443 1686 aa28.1■■■□□ 2.09
NPAS1-202ENST00000449844 LRRC7Q96NW7 1537 aa28.09■■■□□ 2.09
NPAS1-202ENST00000449844 C14orf37Q86TY3 774 aa28.09■■■□□ 2.09
NPAS1-202ENST00000449844 USP31Q70CQ4 1352 aa28.08■■■□□ 2.09
NPAS1-202ENST00000449844 IL16Q14005 1332 aa28.08■■■□□ 2.09
NPAS1-202ENST00000449844 FCHSD2O94868 740 aa28.07■■■□□ 2.08
NPAS1-202ENST00000449844 AAMPQ13685 434 aa28.07■■■□□ 2.08
NPAS1-202ENST00000449844 IL13P35225 146 aa28.06■■■□□ 2.08
NPAS1-202ENST00000449844 PHF8Q9UPP1 1060 aa28.06■■■□□ 2.08
NPAS1-202ENST00000449844 TRIM35Q9UPQ4 493 aa28.06■■■□□ 2.08
NPAS1-202ENST00000449844 IPO9Q96P70 1041 aaKnown RBP28.04■■■□□ 2.08
NPAS1-202ENST00000449844 PROSER2Q86WR7 435 aaPredicted RBP28.02■■■□□ 2.08
NPAS1-202ENST00000449844 RSPH6AQ9H0K4 717 aa28.02■■■□□ 2.08
NPAS1-202ENST00000449844 USP54Q70EL1 1684 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms