RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 RPRD2Q5VT52 1461 aaKnown RBP10.88□□□□□ -0.67
HCG18-238ENST00000449544 STARD3NLO95772 234 aa10.87□□□□□ -0.67
HCG18-238ENST00000449544 KCNJ4P48050 445 aa10.87□□□□□ -0.67
HCG18-238ENST00000449544 FTSJ3Q8IY81 847 aaKnown RBP10.87□□□□□ -0.67
HCG18-238ENST00000449544 ISY1Q9ULR0 285 aaKnown RBP10.87□□□□□ -0.67
HCG18-238ENST00000449544 FAM182BQ5T319 152 aa10.87□□□□□ -0.67
HCG18-238ENST00000449544 NECTIN2Q92692 538 aa10.87□□□□□ -0.67
HCG18-238ENST00000449544 PZPP20742 1482 aa10.86□□□□□ -0.67
HCG18-238ENST00000449544 TCERG1O14776 1098 aaKnown RBP10.86□□□□□ -0.67
HCG18-238ENST00000449544 GORABQ5T7V8 394 aa10.86□□□□□ -0.67
HCG18-238ENST00000449544 KIF6Q6ZMV9 814 aa10.86□□□□□ -0.67
HCG18-238ENST00000449544 ZNF219Q9P2Y4 722 aaPredicted RBP10.86□□□□□ -0.67
HCG18-238ENST00000449544 RIMS1Q86UR5 1692 aaKnown RBP10.86□□□□□ -0.67
HCG18-238ENST00000449544 ERVK-7P63135 1459 aa10.86□□□□□ -0.67
HCG18-238ENST00000449544 SHANK2Q9UPX8 1470 aa10.86□□□□□ -0.67
HCG18-238ENST00000449544 ELL2O00472 640 aaPredicted RBP10.86□□□□□ -0.67
HCG18-238ENST00000449544 ABCA9Q8IUA7 1624 aa10.86□□□□□ -0.67
HCG18-238ENST00000449544 TTC21AQ8NDW8 1320 aa10.85□□□□□ -0.67
HCG18-238ENST00000449544 ARHGEF12Q9NZN5 1544 aa10.85□□□□□ -0.67
HCG18-238ENST00000449544 AIMP1Q12904 312 aaKnown RBP10.85□□□□□ -0.67
HCG18-238ENST00000449544 TTC21BQ7Z4L5 1316 aa10.85□□□□□ -0.67
HCG18-238ENST00000449544 MBD5Q9P267 1494 aa10.84□□□□□ -0.67
HCG18-238ENST00000449544 RALBP1Q15311 655 aa10.84□□□□□ -0.67
HCG18-238ENST00000449544 FRAT1Q92837 279 aaPredicted RBP10.84□□□□□ -0.67
HCG18-238ENST00000449544 PIK3R4Q99570 1358 aa10.84□□□□□ -0.67
HCG18-238ENST00000449544 DDX58O95786 925 aaKnown RBP10.84□□□□□ -0.67
HCG18-238ENST00000449544 HSP90B1P14625 803 aaKnown RBP10.84□□□□□ -0.67
HCG18-238ENST00000449544 SLC4A10Q6U841 1118 aa10.84□□□□□ -0.67
HCG18-238ENST00000449544 TSPYL4Q9UJ04 414 aa10.84□□□□□ -0.67
HCG18-238ENST00000449544 HDAC5Q9UQL6 1122 aa10.84□□□□□ -0.67
HCG18-238ENST00000449544 IFNL2Q8IZJ0 200 aa10.83□□□□□ -0.68
HCG18-238ENST00000449544 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
HCG18-238ENST00000449544 CAMSAP1Q5T5Y3 1602 aa10.83□□□□□ -0.68
HCG18-238ENST00000449544 CCDC146Q8IYE0 955 aa10.83□□□□□ -0.68
HCG18-238ENST00000449544 CCNL1Q9UK58 526 aaPredicted RBP10.83□□□□□ -0.68
HCG18-238ENST00000449544 YTHDC2Q9H6S0 1430 aaKnown RBP10.82□□□□□ -0.68
HCG18-238ENST00000449544 AMOTQ4VCS5 1084 aa10.82□□□□□ -0.68
HCG18-238ENST00000449544 GJD4Q96KN9 370 aaPredicted RBP10.82□□□□□ -0.68
HCG18-238ENST00000449544 ZNF652Q9Y2D9 606 aa10.82□□□□□ -0.68
HCG18-238ENST00000449544 TRPM2O94759 1503 aa10.81□□□□□ -0.68
HCG18-238ENST00000449544 ZNF622Q969S3 477 aaKnown RBP eCLIP10.81□□□□□ -0.68
HCG18-238ENST00000449544 ARHGEF40Q8TER5 1519 aa10.81□□□□□ -0.68
HCG18-238ENST00000449544 ATP6V1AP38606 617 aa10.81□□□□□ -0.68
HCG18-238ENST00000449544 VPS37DQ86XT2 251 aa10.81□□□□□ -0.68
HCG18-238ENST00000449544 RIC3Q7Z5B4 369 aa10.8□□□□□ -0.68
HCG18-238ENST00000449544 PTPRTO14522 1441 aa10.8□□□□□ -0.68
HCG18-238ENST00000449544 PPIP5K1Q6PFW1 1433 aa10.8□□□□□ -0.68
HCG18-238ENST00000449544 METP08581 1390 aa10.8□□□□□ -0.68
HCG18-238ENST00000449544 DAXXQ9UER7 740 aaPredicted RBP10.8□□□□□ -0.68
HCG18-238ENST00000449544 RTCBQ9Y3I0 505 aaKnown RBP10.8□□□□□ -0.68
HCG18-238ENST00000449544 PARP3Q9Y6F1 533 aa10.8□□□□□ -0.68
HCG18-238ENST00000449544 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
HCG18-238ENST00000449544 RIPK4P57078 832 aa10.79□□□□□ -0.68
HCG18-238ENST00000449544 ATF5Q9Y2D1 282 aaPredicted RBP10.79□□□□□ -0.68
HCG18-238ENST00000449544 CFAP44Q96MT7 982 aa10.78□□□□□ -0.68
HCG18-238ENST00000449544 PRKAR2BP31323 418 aa10.78□□□□□ -0.68
HCG18-238ENST00000449544 GRM1Q13255 1194 aa10.78□□□□□ -0.68
HCG18-238ENST00000449544 MADDQ8WXG6 1647 aa10.78□□□□□ -0.68
HCG18-238ENST00000449544 LARP1Q6PKG0 1096 aaKnown RBP10.78□□□□□ -0.68
HCG18-238ENST00000449544 EMILIN1Q9Y6C2 1016 aa10.78□□□□□ -0.68
HCG18-238ENST00000449544 ABCC11Q96J66 1382 aa10.77□□□□□ -0.68
HCG18-238ENST00000449544 SPON1Q9HCB6 807 aa10.77□□□□□ -0.69
HCG18-238ENST00000449544 PRIM1P49642 420 aaKnown RBP10.76□□□□□ -0.69
HCG18-238ENST00000449544 EN1Q05925 392 aaPredicted RBP10.76□□□□□ -0.69
HCG18-238ENST00000449544 R3HDM1Q15032 1099 aaKnown RBP10.76□□□□□ -0.69
HCG18-238ENST00000449544 GNPATO15228 680 aa10.76□□□□□ -0.69
HCG18-238ENST00000449544 CHMP4BQ9H444 224 aaKnown RBP10.76□□□□□ -0.69
HCG18-238ENST00000449544 C9orf78Q9NZ63 289 aaPredicted RBP10.76□□□□□ -0.69
HCG18-238ENST00000449544 AGLP35573 1532 aa10.75□□□□□ -0.69
HCG18-238ENST00000449544 PREX2Q70Z35 1606 aa10.75□□□□□ -0.69
HCG18-238ENST00000449544 BTBD11A6QL63 1104 aa10.75□□□□□ -0.69
HCG18-238ENST00000449544 PNISRQ8TF01 805 aaKnown RBP10.75□□□□□ -0.69
HCG18-238ENST00000449544 CWC22Q9HCG8 908 aaKnown RBP10.75□□□□□ -0.69
HCG18-238ENST00000449544 TRAPPC3LQ5T215 181 aa10.75□□□□□ -0.69
HCG18-238ENST00000449544 SIRT1Q96EB6 747 aa10.75□□□□□ -0.69
HCG18-238ENST00000449544 KIAA0232Q92628 1395 aa10.74□□□□□ -0.69
HCG18-238ENST00000449544 RTL5Q5HYW3 569 aaPredicted RBP10.74□□□□□ -0.69
HCG18-238ENST00000449544 MYL6BP14649 208 aa10.74□□□□□ -0.69
HCG18-238ENST00000449544 IPO8O15397 1037 aaKnown RBP10.74□□□□□ -0.69
HCG18-238ENST00000449544 HSP90AB2PQ58FF8 381 aa10.74□□□□□ -0.69
HCG18-238ENST00000449544 FLAD1Q8NFF5 587 aa10.74□□□□□ -0.69
HCG18-238ENST00000449544 SPATA31A3Q5VYP0 1347 aa10.74□□□□□ -0.69
HCG18-238ENST00000449544 ABCC3O15438 1527 aa10.73□□□□□ -0.69
HCG18-238ENST00000449544 RPGRQ92834 1020 aaKnown RBP10.73□□□□□ -0.69
HCG18-238ENST00000449544 TEX13AQ9BXU3 409 aaPredicted RBP10.73□□□□□ -0.69
HCG18-238ENST00000449544 TRIM34Q9BYJ4 488 aa10.73□□□□□ -0.69
HCG18-238ENST00000449544 TCOF1Q13428 1488 aaKnown RBP10.73□□□□□ -0.69
HCG18-238ENST00000449544 MS4A1P11836 297 aa10.73□□□□□ -0.69
HCG18-238ENST00000449544 ADGRL3Q9HAR2 1447 aa10.73□□□□□ -0.69
HCG18-238ENST00000449544 A0A087WZG4 1122 aa10.72□□□□□ -0.69
HCG18-238ENST00000449544 CCDC125Q86Z20 511 aa10.72□□□□□ -0.69
HCG18-238ENST00000449544 ZNF526Q8TF50 670 aaPredicted RBP10.72□□□□□ -0.69
HCG18-238ENST00000449544 NOL10Q9BSC4 688 aaKnown RBP10.72□□□□□ -0.69
HCG18-238ENST00000449544 ARHGEF5Q12774 1597 aa10.72□□□□□ -0.69
HCG18-238ENST00000449544 ARHGAP31Q2M1Z3 1444 aa10.72□□□□□ -0.69
HCG18-238ENST00000449544 ROBO2Q9HCK4 1378 aa10.72□□□□□ -0.69
HCG18-238ENST00000449544 FKBP5Q13451 457 aaPredicted RBP10.72□□□□□ -0.69
HCG18-238ENST00000449544 MSL1Q68DK7 614 aa10.72□□□□□ -0.69
HCG18-238ENST00000449544 BCS1LQ9Y276 419 aa10.72□□□□□ -0.69
HCG18-238ENST00000449544 FBLN1P23142 703 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms