RNA–Protein interactions for RNA: ENST00000449407.6

SORBS2-231, Transcript of sorbin and SH3 domain containing 2, human

TSL 1 (best) BASIC

Gene SORBS2, Length 3,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS2-231	ENST00000449407	EIF4G3	O43432	1585 aa	Known RBP	12.77	□□□□□ -0.37
SORBS2-231	ENST00000449407	TERF1	P54274	439 aa		12.77	□□□□□ -0.37
SORBS2-231	ENST00000449407	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
SORBS2-231	ENST00000449407	CFAP53	Q96M91	514 aa		12.77	□□□□□ -0.37
SORBS2-231	ENST00000449407	CCDC39	Q9UFE4	941 aa		12.77	□□□□□ -0.37
SORBS2-231	ENST00000449407	NGEF	Q8N5V2	710 aa		12.76	□□□□□ -0.37
SORBS2-231	ENST00000449407	RAPGEF6	Q8TEU7	1601 aa		12.76	□□□□□ -0.37
SORBS2-231	ENST00000449407	DMTN	Q08495	405 aa		12.76	□□□□□ -0.37
SORBS2-231	ENST00000449407	KIAA2012	Q0VF49	1180 aa		12.76	□□□□□ -0.37
SORBS2-231	ENST00000449407	ATP2B3	Q16720	1220 aa		12.76	□□□□□ -0.37
SORBS2-231	ENST00000449407	BMP2KL	Q5H9B9	411 aa		12.76	□□□□□ -0.37
SORBS2-231	ENST00000449407	PDLIM2	Q96JY6	352 aa		12.76	□□□□□ -0.37
SORBS2-231	ENST00000449407	ABCC2	Q92887	1545 aa		12.76	□□□□□ -0.37
SORBS2-231	ENST00000449407	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.75	□□□□□ -0.37
SORBS2-231	ENST00000449407	PTPRG	P23470	1445 aa		12.75	□□□□□ -0.37
SORBS2-231	ENST00000449407	VGLL3	A8MV65	326 aa		12.75	□□□□□ -0.37
SORBS2-231	ENST00000449407	NUCB2	P80303	420 aa		12.75	□□□□□ -0.37
SORBS2-231	ENST00000449407	MTERF4	Q7Z6M4	381 aa	Known RBP	12.75	□□□□□ -0.37
SORBS2-231	ENST00000449407	CLASP1	Q7Z460	1538 aa		12.74	□□□□□ -0.37
SORBS2-231	ENST00000449407	ZBTB22	O15209	634 aa		12.74	□□□□□ -0.37
SORBS2-231	ENST00000449407	LRSAM1	Q6UWE0	723 aa		12.74	□□□□□ -0.37
SORBS2-231	ENST00000449407	ZNF710	Q8N1W2	664 aa		12.74	□□□□□ -0.37
SORBS2-231	ENST00000449407	USP25	Q9UHP3	1055 aa		12.74	□□□□□ -0.37
SORBS2-231	ENST00000449407	ADCY10	Q96PN6	1610 aa		12.74	□□□□□ -0.37
SORBS2-231	ENST00000449407	NSD3	Q9BZ95	1437 aa		12.74	□□□□□ -0.37
SORBS2-231	ENST00000449407	ATAD2	Q6PL18	1390 aa		12.73	□□□□□ -0.37
SORBS2-231	ENST00000449407	HS1BP3	Q53T59	392 aa		12.73	□□□□□ -0.37
SORBS2-231	ENST00000449407	ZMYM3	Q14202	1370 aa		12.73	□□□□□ -0.37
SORBS2-231	ENST00000449407	JPH4	Q96JJ6	628 aa		12.73	□□□□□ -0.37
SORBS2-231	ENST00000449407	DTNB	O60941	627 aa		12.72	□□□□□ -0.37
SORBS2-231	ENST00000449407	THUMPD2	Q9BTF0	503 aa	Known RBP	12.72	□□□□□ -0.37
SORBS2-231	ENST00000449407	CDC45	O75419	566 aa		12.72	□□□□□ -0.37
SORBS2-231	ENST00000449407	TMEM132E	Q6IEE7	984 aa		12.72	□□□□□ -0.37
SORBS2-231	ENST00000449407	GSPT1	P15170	499 aa	Known RBP	12.71	□□□□□ -0.37
SORBS2-231	ENST00000449407	U2AF2	P26368	475 aa	Known RBP eCLIP	12.71	□□□□□ -0.37	2e-6	■■■□□ 18.7
SORBS2-231	ENST00000449407	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.71	□□□□□ -0.37
SORBS2-231	ENST00000449407	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.71	□□□□□ -0.37
SORBS2-231	ENST00000449407	ZDHHC9	Q9Y397	364 aa		12.71	□□□□□ -0.37
SORBS2-231	ENST00000449407	POLR3A	O14802	1390 aa	Predicted RBP	12.71	□□□□□ -0.37
SORBS2-231	ENST00000449407	KIAA0556	O60303	1618 aa		12.71	□□□□□ -0.37
SORBS2-231	ENST00000449407	IPO8	O15397	1037 aa	Known RBP	12.71	□□□□□ -0.38
SORBS2-231	ENST00000449407	CGN	Q9P2M7	1197 aa	Known RBP	12.71	□□□□□ -0.38
SORBS2-231	ENST00000449407	PDE4C	Q08493	712 aa		12.7	□□□□□ -0.38
SORBS2-231	ENST00000449407	MYRIP	Q8NFW9	859 aa		12.7	□□□□□ -0.38
SORBS2-231	ENST00000449407	CCDC141	Q6ZP82	1450 aa		12.7	□□□□□ -0.38
SORBS2-231	ENST00000449407	SCAF11	Q99590	1463 aa	Known RBP	12.7	□□□□□ -0.38
SORBS2-231	ENST00000449407	TMPO	P42166	694 aa	Known RBP	12.7	□□□□□ -0.38
SORBS2-231	ENST00000449407	NOLC1	Q14978	699 aa	Known RBP eCLIP	12.7	□□□□□ -0.38
SORBS2-231	ENST00000449407	ADGRF5	Q8IZF2	1346 aa		12.7	□□□□□ -0.38
SORBS2-231	ENST00000449407	ITSN2	Q9NZM3	1697 aa		12.7	□□□□□ -0.38
SORBS2-231	ENST00000449407	RABEP1	Q15276	862 aa		12.7	□□□□□ -0.38
SORBS2-231	ENST00000449407	PHF23	Q9BUL5	403 aa	Predicted RBP	12.7	□□□□□ -0.38
SORBS2-231	ENST00000449407	CHMP4B	Q9H444	224 aa	Known RBP	12.7	□□□□□ -0.38
SORBS2-231	ENST00000449407	SMARCA5	O60264	1052 aa	Predicted RBP	12.69	□□□□□ -0.38
SORBS2-231	ENST00000449407	GGNBP2	Q9H3C7	697 aa		12.69	□□□□□ -0.38
SORBS2-231	ENST00000449407	TSPY26P	Q9H489	355 aa		12.69	□□□□□ -0.38
SORBS2-231	ENST00000449407	KIF3A	Q9Y496	699 aa		12.69	□□□□□ -0.38
SORBS2-231	ENST00000449407	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.69	□□□□□ -0.38
SORBS2-231	ENST00000449407	ZNF771	Q7L3S4	317 aa	Predicted RBP	12.69	□□□□□ -0.38
SORBS2-231	ENST00000449407	SPC24	Q8NBT2	197 aa		12.69	□□□□□ -0.38
SORBS2-231	ENST00000449407	ST18	O60284	1047 aa		12.68	□□□□□ -0.38
SORBS2-231	ENST00000449407	ABCC10	Q5T3U5	1492 aa		12.68	□□□□□ -0.38
SORBS2-231	ENST00000449407	MAGI1	Q96QZ7	1491 aa	Predicted RBP	12.68	□□□□□ -0.38
SORBS2-231	ENST00000449407	TRIM35	Q9UPQ4	493 aa		12.68	□□□□□ -0.38
SORBS2-231	ENST00000449407	GADD45B	O75293	160 aa	Predicted RBP	12.68	□□□□□ -0.38
SORBS2-231	ENST00000449407	NEK4	P51957	841 aa		12.68	□□□□□ -0.38
SORBS2-231	ENST00000449407	SIRT2	Q8IXJ6	389 aa		12.68	□□□□□ -0.38
SORBS2-231	ENST00000449407	PDCL2	Q8N4E4	241 aa		12.68	□□□□□ -0.38
SORBS2-231	ENST00000449407	BCL2L12	Q9HB09	334 aa		12.68	□□□□□ -0.38
SORBS2-231	ENST00000449407	CROCC2	H7BZ55	1655 aa		12.68	□□□□□ -0.38
SORBS2-231	ENST00000449407	FBLN1	P23142	703 aa		12.67	□□□□□ -0.38
SORBS2-231	ENST00000449407	PLCD3	Q8N3E9	789 aa		12.67	□□□□□ -0.38
SORBS2-231	ENST00000449407	TARBP1	Q13395	1621 aa	Known RBP	12.67	□□□□□ -0.38
SORBS2-231	ENST00000449407	NPC1L1	Q9UHC9	1359 aa		12.67	□□□□□ -0.38
SORBS2-231	ENST00000449407	GTF2E1	P29083	439 aa	Predicted RBP	12.66	□□□□□ -0.38
SORBS2-231	ENST00000449407	MCM5	P33992	734 aa		12.66	□□□□□ -0.38
SORBS2-231	ENST00000449407	ZBTB7B	O15156	539 aa	Predicted RBP	12.66	□□□□□ -0.38
SORBS2-231	ENST00000449407	ADCY5	O95622	1261 aa		12.66	□□□□□ -0.38
SORBS2-231	ENST00000449407	HCLS1	P14317	486 aa	Predicted RBP	12.66	□□□□□ -0.38
SORBS2-231	ENST00000449407	TSHZ3	Q63HK5	1081 aa		12.66	□□□□□ -0.38
SORBS2-231	ENST00000449407	CLEC17A	Q6ZS10	378 aa		12.66	□□□□□ -0.38
SORBS2-231	ENST00000449407	TSPYL6	Q8N831	410 aa		12.66	□□□□□ -0.38
SORBS2-231	ENST00000449407	USP26	Q9BXU7	913 aa		12.66	□□□□□ -0.38
SORBS2-231	ENST00000449407	CYP2E1	P05181	493 aa	Predicted RBP	12.65	□□□□□ -0.38
SORBS2-231	ENST00000449407	CCDC27	Q2M243	656 aa		12.65	□□□□□ -0.38
SORBS2-231	ENST00000449407	UTP14C	Q5TAP6	766 aa	Known RBP	12.65	□□□□□ -0.38
SORBS2-231	ENST00000449407	NUP160	Q12769	1436 aa		12.65	□□□□□ -0.38
SORBS2-231	ENST00000449407	PPIP5K1	Q6PFW1	1433 aa		12.65	□□□□□ -0.38
SORBS2-231	ENST00000449407	CDC42BPA	Q5VT25	1732 aa		12.65	□□□□□ -0.38
SORBS2-231	ENST00000449407	SHANK2	Q9UPX8	1470 aa		12.65	□□□□□ -0.38
SORBS2-231	ENST00000449407	GCC1	Q96CN9	775 aa		12.65	□□□□□ -0.38
SORBS2-231	ENST00000449407	SYNM	O15061	1565 aa		12.65	□□□□□ -0.38
SORBS2-231	ENST00000449407	LARP6	Q9BRS8	491 aa	Known RBP	12.64	□□□□□ -0.39
SORBS2-231	ENST00000449407	PLEKHM2	Q8IWE5	1019 aa		12.64	□□□□□ -0.39
SORBS2-231	ENST00000449407	CABP2	Q9NPB3	220 aa		12.64	□□□□□ -0.39
SORBS2-231	ENST00000449407	STAC3	Q96MF2	364 aa		12.64	□□□□□ -0.39
SORBS2-231	ENST00000449407	ATP10B	O94823	1461 aa		12.63	□□□□□ -0.39
SORBS2-231	ENST00000449407	PLXNC1	O60486	1568 aa		12.63	□□□□□ -0.39
SORBS2-231	ENST00000449407	ADAMTS12	P58397	1594 aa		12.63	□□□□□ -0.39
SORBS2-231	ENST00000449407	RIOK3	O14730	519 aa	Known RBP	12.63	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms