RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
SYNGAP1-204ENST00000449372 GOLGA2Q08379 1002 aa17.06■□□□□ 0.32
SYNGAP1-204ENST00000449372 BBXQ8WY36 941 aaPredicted RBP17.06■□□□□ 0.32
SYNGAP1-204ENST00000449372 NINLQ9Y2I6 1382 aa17.05■□□□□ 0.32
SYNGAP1-204ENST00000449372 KDM2BQ8NHM5 1336 aa17.05■□□□□ 0.32
SYNGAP1-204ENST00000449372 CDCA7LQ96GN5 454 aa17.05■□□□□ 0.32
SYNGAP1-204ENST00000449372 UPF2Q9HAU5 1272 aaKnown RBP17.05■□□□□ 0.32
SYNGAP1-204ENST00000449372 NLRP1Q9C000 1473 aa17.04■□□□□ 0.32
SYNGAP1-204ENST00000449372 AEBP2Q6ZN18 517 aaPredicted RBP17.04■□□□□ 0.32
SYNGAP1-204ENST00000449372 MAP7D2Q96T17 732 aa17.03■□□□□ 0.32
SYNGAP1-204ENST00000449372 ZHX1Q9UKY1 873 aaPredicted RBP17.02■□□□□ 0.32
SYNGAP1-204ENST00000449372 NSD2O96028 1365 aa17.02■□□□□ 0.32
SYNGAP1-204ENST00000449372 SMAP1Q8IYB5 467 aaPredicted RBP17.02■□□□□ 0.32
SYNGAP1-204ENST00000449372 ABCC11Q96J66 1382 aa17.02■□□□□ 0.31
SYNGAP1-204ENST00000449372 TAF7LQ5H9L4 462 aa17.02■□□□□ 0.31
SYNGAP1-204ENST00000449372 GRPEL1Q9HAV7 217 aa17.02■□□□□ 0.31
SYNGAP1-204ENST00000449372 FAM13BQ9NYF5 915 aa17.02■□□□□ 0.31
SYNGAP1-204ENST00000449372 A0A1W2PP64 1363 aa17.01■□□□□ 0.31
SYNGAP1-204ENST00000449372 CABP2Q9NPB3 220 aa17.01■□□□□ 0.31
SYNGAP1-204ENST00000449372 MED14O60244 1454 aa17.01■□□□□ 0.31
SYNGAP1-204ENST00000449372 CANXP27824 592 aaKnown RBP17.01■□□□□ 0.31
SYNGAP1-204ENST00000449372 PRAM1Q96QH2 718 aa17■□□□□ 0.31
SYNGAP1-204ENST00000449372 MLECQ14165 292 aa17■□□□□ 0.31
SYNGAP1-204ENST00000449372 ANTXR1Q9H6X2 564 aa17■□□□□ 0.31
SYNGAP1-204ENST00000449372 TECPR2O15040 1411 aa16.99■□□□□ 0.31
SYNGAP1-204ENST00000449372 TRMT2AQ8IZ69 625 aaKnown RBP16.99■□□□□ 0.31
SYNGAP1-204ENST00000449372 KIF20BQ96Q89 1820 aa16.99■□□□□ 0.31
SYNGAP1-204ENST00000449372 IQSEC2Q5JU85 1478 aa16.99■□□□□ 0.31
SYNGAP1-204ENST00000449372 CPS1P31327 1500 aa16.99■□□□□ 0.31
SYNGAP1-204ENST00000449372 C3P01024 1663 aa16.99■□□□□ 0.31
SYNGAP1-204ENST00000449372 MCM4P33991 863 aa16.99■□□□□ 0.31
SYNGAP1-204ENST00000449372 STK26Q9P289 416 aa16.99■□□□□ 0.31
SYNGAP1-204ENST00000449372 ATAD2Q6PL18 1390 aa16.98■□□□□ 0.31
SYNGAP1-204ENST00000449372 MAPK8IP3Q9UPT6 1336 aa16.98■□□□□ 0.31
SYNGAP1-204ENST00000449372 RIPK4P57078 832 aa16.98■□□□□ 0.31
SYNGAP1-204ENST00000449372 CGNL1Q0VF96 1302 aa16.97■□□□□ 0.31
SYNGAP1-204ENST00000449372 TNRQ92752 1358 aa16.97■□□□□ 0.31
SYNGAP1-204ENST00000449372 TRAK2O60296 914 aa16.97■□□□□ 0.31
SYNGAP1-204ENST00000449372 C20orf194Q5TEA3 1177 aa16.97■□□□□ 0.31
SYNGAP1-204ENST00000449372 METP08581 1390 aa16.96■□□□□ 0.31
SYNGAP1-204ENST00000449372 USP19O94966 1318 aa16.96■□□□□ 0.31
SYNGAP1-204ENST00000449372 NAP1L2Q9ULW6 460 aaPredicted RBP16.96■□□□□ 0.31
SYNGAP1-204ENST00000449372 COL3A1P02461 1466 aaPredicted RBP16.96■□□□□ 0.31
SYNGAP1-204ENST00000449372 DUSP27Q5VZP5 1158 aa16.96■□□□□ 0.31
SYNGAP1-204ENST00000449372 E9PSI1 815 aa16.95■□□□□ 0.3
SYNGAP1-204ENST00000449372 GTF2E1P29083 439 aaPredicted RBP16.95■□□□□ 0.3
SYNGAP1-204ENST00000449372 SAFB2Q14151 953 aaKnown RBP eCLIP16.94■□□□□ 0.3
SYNGAP1-204ENST00000449372 MORC1Q86VD1 984 aa16.94■□□□□ 0.3
SYNGAP1-204ENST00000449372 ARID3AQ99856 593 aa16.94■□□□□ 0.3
SYNGAP1-204ENST00000449372 TMEM2Q9UHN6 1383 aa16.94■□□□□ 0.3
SYNGAP1-204ENST00000449372 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
SYNGAP1-204ENST00000449372 PRDM10Q9NQV6 1147 aa16.93■□□□□ 0.3
SYNGAP1-204ENST00000449372 STAG3Q9UJ98 1225 aa16.93■□□□□ 0.3
SYNGAP1-204ENST00000449372 FAM135BQ49AJ0 1406 aa16.93■□□□□ 0.3
SYNGAP1-204ENST00000449372 MINK1Q8N4C8 1332 aaPredicted RBP16.93■□□□□ 0.3
SYNGAP1-204ENST00000449372 NCLP19338 710 aaKnown RBP16.93■□□□□ 0.3
SYNGAP1-204ENST00000449372 ADAMTS13Q76LX8 1427 aa16.93■□□□□ 0.3
SYNGAP1-204ENST00000449372 ATP7BP35670 1465 aa16.93■□□□□ 0.3
SYNGAP1-204ENST00000449372 FER1L4A9Z1Z3 1794 aa16.93■□□□□ 0.3
SYNGAP1-204ENST00000449372 OFD1O75665 1012 aa16.92■□□□□ 0.3
SYNGAP1-204ENST00000449372 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.92■□□□□ 0.3
SYNGAP1-204ENST00000449372 ISY1Q9ULR0 285 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-204ENST00000449372 SIRT1Q96EB6 747 aa16.92■□□□□ 0.3
SYNGAP1-204ENST00000449372 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
SYNGAP1-204ENST00000449372 SLFN5Q08AF3 891 aa16.91■□□□□ 0.3
SYNGAP1-204ENST00000449372 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
SYNGAP1-204ENST00000449372 TERF1P54274 439 aa16.91■□□□□ 0.3
SYNGAP1-204ENST00000449372 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.91■□□□□ 0.3
SYNGAP1-204ENST00000449372 CHMP4BQ9H444 224 aaKnown RBP16.91■□□□□ 0.3
SYNGAP1-204ENST00000449372 MON2Q7Z3U7 1717 aa16.91■□□□□ 0.3
SYNGAP1-204ENST00000449372 PHF23Q9BUL5 403 aaPredicted RBP16.91■□□□□ 0.3
SYNGAP1-204ENST00000449372 AKAP12Q02952 1782 aa16.91■□□□□ 0.3
SYNGAP1-204ENST00000449372 CCDC146Q8IYE0 955 aa16.9■□□□□ 0.3
SYNGAP1-204ENST00000449372 SLIT1O75093 1534 aa16.9■□□□□ 0.3
SYNGAP1-204ENST00000449372 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
SYNGAP1-204ENST00000449372 SPINK5Q9NQ38 1064 aaPredicted RBP16.9■□□□□ 0.3
SYNGAP1-204ENST00000449372 ARHGAP23Q9P227 1491 aa16.9■□□□□ 0.3
SYNGAP1-204ENST00000449372 CPSF1Q10570 1443 aaKnown RBP16.9■□□□□ 0.3
SYNGAP1-204ENST00000449372 SEC24BO95487 1268 aa16.9■□□□□ 0.3
SYNGAP1-204ENST00000449372 SRPK2P78362 688 aaKnown RBP16.9■□□□□ 0.3
SYNGAP1-204ENST00000449372 WAPLQ7Z5K2 1190 aa16.9■□□□□ 0.3
SYNGAP1-204ENST00000449372 APAF1O14727 1248 aa16.89■□□□□ 0.29
SYNGAP1-204ENST00000449372 PDE3AQ14432 1141 aa16.89■□□□□ 0.29
SYNGAP1-204ENST00000449372 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.89■□□□□ 0.29
SYNGAP1-204ENST00000449372 MTHFSP49914 203 aa16.89■□□□□ 0.29
SYNGAP1-204ENST00000449372 SPRYD3Q8NCJ5 442 aa16.89■□□□□ 0.29
SYNGAP1-204ENST00000449372 FYB1O15117 783 aa16.89■□□□□ 0.29
SYNGAP1-204ENST00000449372 TOPAZ1Q8N9V7 1692 aa16.88■□□□□ 0.29
SYNGAP1-204ENST00000449372 CDC42BPGQ6DT37 1551 aa16.88■□□□□ 0.29
SYNGAP1-204ENST00000449372 UTP14CQ5TAP6 766 aaKnown RBP16.88■□□□□ 0.29
SYNGAP1-204ENST00000449372 MTERF4Q7Z6M4 381 aaKnown RBP16.88■□□□□ 0.29
SYNGAP1-204ENST00000449372 R3HCC1Q9Y3T6 440 aaKnown RBP16.87■□□□□ 0.29
SYNGAP1-204ENST00000449372 KLHL34Q8N239 644 aa16.87■□□□□ 0.29
SYNGAP1-204ENST00000449372 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
SYNGAP1-204ENST00000449372 DMTNQ08495 405 aa16.87■□□□□ 0.29
SYNGAP1-204ENST00000449372 ZSCAN30Q86W11 494 aa16.87■□□□□ 0.29
SYNGAP1-204ENST00000449372 PNPLA6Q8IY17 1366 aa16.87■□□□□ 0.29
SYNGAP1-204ENST00000449372 PLEKHG1Q9ULL1 1385 aa16.87■□□□□ 0.29
SYNGAP1-204ENST00000449372 MSNP26038 577 aaKnown RBP16.86■□□□□ 0.29
SYNGAP1-204ENST00000449372 TBC1D2Q9BYX2 928 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms