RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 GSE1Q14687 1217 aa21.29■■□□□ 1
SKIDA1-202ENST00000449193 TTC39AQ5SRH9 613 aa21.29■■□□□ 1
SKIDA1-202ENST00000449193 NUTM2AQ8IVF1 878 aaPredicted RBP21.29■■□□□ 1
SKIDA1-202ENST00000449193 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
SKIDA1-202ENST00000449193 BRD4O60885 1362 aaPredicted RBP21.28■■□□□ 1
SKIDA1-202ENST00000449193 TMEM132AQ24JP5 1023 aa21.27■■□□□ 1
SKIDA1-202ENST00000449193 LRRC9Q6ZRR7 1453 aa21.27■■□□□ 1
SKIDA1-202ENST00000449193 ANKLE2Q86XL3 938 aa21.27■■□□□ 1
SKIDA1-202ENST00000449193 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.27■■□□□ 1
SKIDA1-202ENST00000449193 TWISTNBQ3B726 338 aaPredicted RBP21.26■□□□□ 0.99
SKIDA1-202ENST00000449193 PLEKHH2Q8IVE3 1493 aa21.26■□□□□ 0.99
SKIDA1-202ENST00000449193 SLC52A1Q9NWF4 448 aa21.26■□□□□ 0.99
SKIDA1-202ENST00000449193 ADAMTS8Q9UP79 889 aa21.26■□□□□ 0.99
SKIDA1-202ENST00000449193 CDK5RAP3Q96JB5 506 aa21.25■□□□□ 0.99
SKIDA1-202ENST00000449193 GNAI2P04899 355 aa21.25■□□□□ 0.99
SKIDA1-202ENST00000449193 CDR1P51861 262 aa21.25■□□□□ 0.99
SKIDA1-202ENST00000449193 SDF4Q9BRK5 362 aa21.25■□□□□ 0.99
SKIDA1-202ENST00000449193 HFM1A2PYH4 1435 aa21.25■□□□□ 0.99
SKIDA1-202ENST00000449193 HDGFL1Q5TGJ6 251 aa21.25■□□□□ 0.99
SKIDA1-202ENST00000449193 DDX54Q8TDD1 881 aaKnown RBP21.25■□□□□ 0.99
SKIDA1-202ENST00000449193 CDK19Q9BWU1 502 aa21.25■□□□□ 0.99
SKIDA1-202ENST00000449193 POGZQ7Z3K3 1410 aa21.24■□□□□ 0.99
SKIDA1-202ENST00000449193 ZFYVE27Q5T4F4 411 aa21.24■□□□□ 0.99
SKIDA1-202ENST00000449193 TXLNAP40222 546 aa21.24■□□□□ 0.99
SKIDA1-202ENST00000449193 HMGB2P26583 209 aaKnown RBP21.23■□□□□ 0.99
SKIDA1-202ENST00000449193 RRP12Q5JTH9 1297 aaKnown RBP21.23■□□□□ 0.99
SKIDA1-202ENST00000449193 ZNF530Q6P9A1 599 aaPredicted RBP21.23■□□□□ 0.99
SKIDA1-202ENST00000449193 CCDC173Q0VFZ6 552 aa21.22■□□□□ 0.99
SKIDA1-202ENST00000449193 PPP2R1AP30153 589 aa21.22■□□□□ 0.99
SKIDA1-202ENST00000449193 RUFY1Q96T51 708 aa21.22■□□□□ 0.99
SKIDA1-202ENST00000449193 SULT6B1Q6IMI4 303 aa21.21■□□□□ 0.99
SKIDA1-202ENST00000449193 NACAP1Q9BZK3 213 aa21.21■□□□□ 0.99
SKIDA1-202ENST00000449193 EXOSC9Q06265 439 aaKnown RBP21.21■□□□□ 0.99
SKIDA1-202ENST00000449193 RDXP35241 583 aaKnown RBP21.21■□□□□ 0.99
SKIDA1-202ENST00000449193 PDCP20941 246 aa21.2■□□□□ 0.99
SKIDA1-202ENST00000449193 PRDM11Q9NQV5 511 aa21.2■□□□□ 0.99
SKIDA1-202ENST00000449193 FBXO3Q9UK99 471 aa21.2■□□□□ 0.99
SKIDA1-202ENST00000449193 KDM4AO75164 1064 aa21.2■□□□□ 0.98
SKIDA1-202ENST00000449193 CCT4P50991 539 aaKnown RBP21.2■□□□□ 0.98
SKIDA1-202ENST00000449193 NCAPD3P42695 1498 aa21.19■□□□□ 0.98
SKIDA1-202ENST00000449193 MPHOSPH8Q99549 860 aa21.19■□□□□ 0.98
SKIDA1-202ENST00000449193 MCM2P49736 904 aa21.19■□□□□ 0.98
SKIDA1-202ENST00000449193 CABP1Q9NZU7 370 aa21.19■□□□□ 0.98
SKIDA1-202ENST00000449193 SLC4A2P04920 1241 aa21.19■□□□□ 0.98
SKIDA1-202ENST00000449193 GCC1Q96CN9 775 aa21.19■□□□□ 0.98
SKIDA1-202ENST00000449193 RTEL1-TNFRSF6BF6WH68 1400 aa21.19■□□□□ 0.98
SKIDA1-202ENST00000449193 ATP2B2Q01814 1243 aa21.19■□□□□ 0.98
SKIDA1-202ENST00000449193 HSP90AB2PQ58FF8 381 aa21.19■□□□□ 0.98
SKIDA1-202ENST00000449193 KRT18P05783 430 aaKnown RBP21.18■□□□□ 0.98
SKIDA1-202ENST00000449193 ATP2B1P20020 1258 aa21.18■□□□□ 0.98
SKIDA1-202ENST00000449193 AK7Q96M32 723 aa21.18■□□□□ 0.98
SKIDA1-202ENST00000449193 MNS1Q8NEH6 495 aa21.18■□□□□ 0.98
SKIDA1-202ENST00000449193 ACBD3Q9H3P7 528 aa21.18■□□□□ 0.98
SKIDA1-202ENST00000449193 PDILTQ8N807 584 aa21.17■□□□□ 0.98
SKIDA1-202ENST00000449193 ZSCAN25Q6NSZ9 544 aa21.17■□□□□ 0.98
SKIDA1-202ENST00000449193 TEX35Q5T0J7 233 aa21.17■□□□□ 0.98
SKIDA1-202ENST00000449193 SRCIN1Q9C0H9 1055 aa21.17■□□□□ 0.98
SKIDA1-202ENST00000449193 IFT57Q9NWB7 429 aa21.17■□□□□ 0.98
SKIDA1-202ENST00000449193 CCDC57Q2TAC2 916 aa21.16■□□□□ 0.98
SKIDA1-202ENST00000449193 ZNF396Q96N95 335 aaPredicted RBP21.16■□□□□ 0.98
SKIDA1-202ENST00000449193 MAGEC2Q9UBF1 373 aaPredicted RBP21.16■□□□□ 0.98
SKIDA1-202ENST00000449193 KINO60870 393 aaKnown RBP21.16■□□□□ 0.98
SKIDA1-202ENST00000449193 KIF21BO75037 1637 aa21.15■□□□□ 0.98
SKIDA1-202ENST00000449193 PATL2C9JE40 543 aaKnown RBP21.15■□□□□ 0.98
SKIDA1-202ENST00000449193 LETM1O95202 739 aaPredicted RBP21.15■□□□□ 0.98
SKIDA1-202ENST00000449193 ARGLU1Q9NWB6 273 aaPredicted RBP21.15■□□□□ 0.98
SKIDA1-202ENST00000449193 C9orf84Q5VXU9 1444 aa21.15■□□□□ 0.98
SKIDA1-202ENST00000449193 PIP4K2AP48426 406 aaPredicted RBP21.15■□□□□ 0.98
SKIDA1-202ENST00000449193 FILIP1LQ4L180 1135 aa21.15■□□□□ 0.98
SKIDA1-202ENST00000449193 RBM5P52756 815 aaKnown RBP eCLIP21.14■□□□□ 0.98
SKIDA1-202ENST00000449193 RPGRIP1LQ68CZ1 1315 aa21.14■□□□□ 0.97
SKIDA1-202ENST00000449193 SLC12A5Q9H2X9 1139 aa21.14■□□□□ 0.97
SKIDA1-202ENST00000449193 TRIM22Q8IYM9 498 aa21.13■□□□□ 0.97
SKIDA1-202ENST00000449193 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
SKIDA1-202ENST00000449193 NEK4P51957 841 aa21.13■□□□□ 0.97
SKIDA1-202ENST00000449193 PIP4K2BP78356 416 aa21.13■□□□□ 0.97
SKIDA1-202ENST00000449193 HSP90AA2PQ14568 343 aaPredicted RBP21.13■□□□□ 0.97
SKIDA1-202ENST00000449193 SYCP1Q15431 976 aa21.13■□□□□ 0.97
SKIDA1-202ENST00000449193 PAF1Q8N7H5 531 aa21.13■□□□□ 0.97
SKIDA1-202ENST00000449193 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
SKIDA1-202ENST00000449193 MYL6BP14649 208 aa21.12■□□□□ 0.97
SKIDA1-202ENST00000449193 JMYQ8N9B5 988 aa21.12■□□□□ 0.97
SKIDA1-202ENST00000449193 NOB1Q9ULX3 412 aaKnown RBP21.12■□□□□ 0.97
SKIDA1-202ENST00000449193 SLC26A8Q96RN1 970 aa21.12■□□□□ 0.97
SKIDA1-202ENST00000449193 MYO6Q9UM54 1294 aa21.12■□□□□ 0.97
SKIDA1-202ENST00000449193 STK38Q15208 465 aa21.11■□□□□ 0.97
SKIDA1-202ENST00000449193 LRRCC1Q9C099 1032 aa21.11■□□□□ 0.97
SKIDA1-202ENST00000449193 RSPH6AQ9H0K4 717 aa21.11■□□□□ 0.97
SKIDA1-202ENST00000449193 SMARCE1Q969G3 411 aa21.11■□□□□ 0.97
SKIDA1-202ENST00000449193 CAGE1Q8TC20 777 aa21.11■□□□□ 0.97
SKIDA1-202ENST00000449193 SOGA3Q5TF21 947 aa21.11■□□□□ 0.97
SKIDA1-202ENST00000449193 SIL1Q9H173 461 aa21.11■□□□□ 0.97
SKIDA1-202ENST00000449193 ANKRD1Q15327 319 aa21.11■□□□□ 0.97
SKIDA1-202ENST00000449193 RABEP1Q15276 862 aa21.1■□□□□ 0.97
SKIDA1-202ENST00000449193 CCDC69A6NI79 296 aa21.1■□□□□ 0.97
SKIDA1-202ENST00000449193 CT47B1P0C2W7 299 aaPredicted RBP21.1■□□□□ 0.97
SKIDA1-202ENST00000449193 C1orf115Q9H7X2 142 aa21.1■□□□□ 0.97
SKIDA1-202ENST00000449193 PDE3AQ14432 1141 aa21.1■□□□□ 0.97
SKIDA1-202ENST00000449193 ATAD2Q6PL18 1390 aa21.09■□□□□ 0.97
SKIDA1-202ENST00000449193 CYP46A1Q9Y6A2 500 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms