RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 NHSL1Q5SYE7 1610 aa20.04■□□□□ 0.8
SHANK2-210ENST00000449116 SCAF1Q9H7N4 1312 aaKnown RBP20.03■□□□□ 0.8
SHANK2-210ENST00000449116 XPCQ01831 940 aaPredicted RBP20.03■□□□□ 0.8
SHANK2-210ENST00000449116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.03■□□□□ 0.8
SHANK2-210ENST00000449116 PXDNQ92626 1479 aa20.03■□□□□ 0.8
SHANK2-210ENST00000449116 SOS2Q07890 1332 aaPredicted RBP20.02■□□□□ 0.8
SHANK2-210ENST00000449116 TTC21AQ8NDW8 1320 aa20.02■□□□□ 0.8
SHANK2-210ENST00000449116 AHDC1Q5TGY3 1603 aaPredicted RBP20.02■□□□□ 0.8
SHANK2-210ENST00000449116 AMER1Q5JTC6 1135 aaPredicted RBP20.02■□□□□ 0.8
SHANK2-210ENST00000449116 SBNO1A3KN83 1393 aa20.01■□□□□ 0.79
SHANK2-210ENST00000449116 PAK3O75914 559 aaPredicted RBP20.01■□□□□ 0.79
SHANK2-210ENST00000449116 DIEXFQ68CQ4 756 aaKnown RBP20.01■□□□□ 0.79
SHANK2-210ENST00000449116 NSD2O96028 1365 aa20■□□□□ 0.79
SHANK2-210ENST00000449116 NPC1L1Q9UHC9 1359 aa20■□□□□ 0.79
SHANK2-210ENST00000449116 TRPM3Q9HCF6 1732 aaPredicted RBP20■□□□□ 0.79
SHANK2-210ENST00000449116 FYB1O15117 783 aa19.99■□□□□ 0.79
SHANK2-210ENST00000449116 NME9Q86XW9 330 aa19.98■□□□□ 0.79
SHANK2-210ENST00000449116 TNS3Q68CZ2 1445 aa19.97■□□□□ 0.79
SHANK2-210ENST00000449116 CC2D1BQ5T0F9 858 aaKnown RBP19.97■□□□□ 0.79
SHANK2-210ENST00000449116 KIF20BQ96Q89 1820 aa19.97■□□□□ 0.79
SHANK2-210ENST00000449116 ABTB2Q8N961 1025 aa19.96■□□□□ 0.79
SHANK2-210ENST00000449116 GGNBP2Q9H3C7 697 aa19.96■□□□□ 0.79
SHANK2-210ENST00000449116 SPATA31A3Q5VYP0 1347 aa19.96■□□□□ 0.79
SHANK2-210ENST00000449116 PIK3C2AO00443 1686 aa19.95■□□□□ 0.78
SHANK2-210ENST00000449116 USP31Q70CQ4 1352 aa19.95■□□□□ 0.78
SHANK2-210ENST00000449116 ALS2Q96Q42 1657 aa19.94■□□□□ 0.78
SHANK2-210ENST00000449116 CNGB1Q14028 1251 aaPredicted RBP19.94■□□□□ 0.78
SHANK2-210ENST00000449116 ARHGEF10O15013 1369 aa19.94■□□□□ 0.78
SHANK2-210ENST00000449116 OVOS2A0A0J9YW53 1432 aa19.93■□□□□ 0.78
SHANK2-210ENST00000449116 OVOS2Q6IE36 1432 aa19.93■□□□□ 0.78
SHANK2-210ENST00000449116 PHLPP1O60346 1717 aa19.93■□□□□ 0.78
SHANK2-210ENST00000449116 ANP32CO43423 234 aa19.93■□□□□ 0.78
SHANK2-210ENST00000449116 NLRP6P59044 892 aa19.93■□□□□ 0.78
SHANK2-210ENST00000449116 LMOD2Q6P5Q4 547 aa19.93■□□□□ 0.78
SHANK2-210ENST00000449116 LRRC59Q96AG4 307 aaKnown RBP19.93■□□□□ 0.78
SHANK2-210ENST00000449116 COG3Q96JB2 828 aa19.93■□□□□ 0.78
SHANK2-210ENST00000449116 ZRANB1Q9UGI0 708 aa19.93■□□□□ 0.78
SHANK2-210ENST00000449116 COL16A1Q07092 1604 aaPredicted RBP19.92■□□□□ 0.78
SHANK2-210ENST00000449116 ANKRD26Q9UPS8 1709 aa19.92■□□□□ 0.78
SHANK2-210ENST00000449116 USP54Q70EL1 1684 aa19.91■□□□□ 0.78
SHANK2-210ENST00000449116 NUTM2GQ5VZR2 741 aa19.91■□□□□ 0.78
SHANK2-210ENST00000449116 MORC1Q86VD1 984 aa19.91■□□□□ 0.78
SHANK2-210ENST00000449116 NLRP13Q86W25 1043 aa19.91■□□□□ 0.78
SHANK2-210ENST00000449116 PRKRIP1Q9H875 184 aaPredicted RBP19.91■□□□□ 0.78
SHANK2-210ENST00000449116 PARD3Q8TEW0 1356 aa19.91■□□□□ 0.78
SHANK2-210ENST00000449116 RALBP1Q15311 655 aa19.9■□□□□ 0.78
SHANK2-210ENST00000449116 USP19O94966 1318 aa19.87■□□□□ 0.77
SHANK2-210ENST00000449116 MARF1Q9Y4F3 1742 aaKnown RBP19.87■□□□□ 0.77
SHANK2-210ENST00000449116 MED1Q15648 1581 aaPredicted RBP19.87■□□□□ 0.77
SHANK2-210ENST00000449116 SLIT3O75094 1523 aa19.85■□□□□ 0.77
SHANK2-210ENST00000449116 PNPLA6Q8IY17 1366 aa19.84■□□□□ 0.77
SHANK2-210ENST00000449116 HSPA1LP34931 641 aa19.84■□□□□ 0.77
SHANK2-210ENST00000449116 TNNT2P45379 298 aaPredicted RBP19.84■□□□□ 0.77
SHANK2-210ENST00000449116 AATKQ6ZMQ8 1374 aa19.83■□□□□ 0.77
SHANK2-210ENST00000449116 ILDR2Q71H61 639 aa19.83■□□□□ 0.77
SHANK2-210ENST00000449116 KCNH5Q8NCM2 988 aa19.83■□□□□ 0.77
SHANK2-210ENST00000449116 MYBBP1AQ9BQG0 1328 aaKnown RBP19.82■□□□□ 0.76
SHANK2-210ENST00000449116 PLEKHG5O94827 1062 aa19.82■□□□□ 0.76
SHANK2-210ENST00000449116 COL22A1Q8NFW1 1626 aaPredicted RBP19.82■□□□□ 0.76
SHANK2-210ENST00000449116 JCADQ9P266 1359 aa19.82■□□□□ 0.76
SHANK2-210ENST00000449116 SOX12O15370 315 aa19.81■□□□□ 0.76
SHANK2-210ENST00000449116 GCP02774 474 aa19.81■□□□□ 0.76
SHANK2-210ENST00000449116 PPP2R1AP30153 589 aa19.81■□□□□ 0.76
SHANK2-210ENST00000449116 CABLES1Q8TDN4 633 aa19.81■□□□□ 0.76
SHANK2-210ENST00000449116 CRYBG1Q9Y4K1 1723 aa19.81■□□□□ 0.76
SHANK2-210ENST00000449116 PHRF1Q9P1Y6 1649 aaKnown RBP19.8■□□□□ 0.76
SHANK2-210ENST00000449116 NFAT5O94916 1531 aa19.8■□□□□ 0.76
SHANK2-210ENST00000449116 SHPRHQ149N8 1683 aa19.79■□□□□ 0.76
SHANK2-210ENST00000449116 FBLN1P23142 703 aa19.79■□□□□ 0.76
SHANK2-210ENST00000449116 MIER1Q8N108 512 aa19.78■□□□□ 0.76
SHANK2-210ENST00000449116 ABCA3Q99758 1704 aa19.77■□□□□ 0.76
SHANK2-210ENST00000449116 SOCS7O14512 581 aa19.77■□□□□ 0.76
SHANK2-210ENST00000449116 HAP1P54257 671 aaPredicted RBP19.77■□□□□ 0.76
SHANK2-210ENST00000449116 RRS1Q15050 365 aaKnown RBP19.77■□□□□ 0.76
SHANK2-210ENST00000449116 POLKQ9UBT6 870 aa19.77■□□□□ 0.76
SHANK2-210ENST00000449116 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
SHANK2-210ENST00000449116 EMILIN1Q9Y6C2 1016 aa19.75■□□□□ 0.75
SHANK2-210ENST00000449116 MAP3K19Q56UN5 1328 aa19.75■□□□□ 0.75
SHANK2-210ENST00000449116 MTHFSP49914 203 aa19.74■□□□□ 0.75
SHANK2-210ENST00000449116 ARHGEF25Q86VW2 580 aa19.74■□□□□ 0.75
SHANK2-210ENST00000449116 MAP2P11137 1827 aaKnown RBP19.74■□□□□ 0.75
SHANK2-210ENST00000449116 CPDO75976 1380 aa19.73■□□□□ 0.75
SHANK2-210ENST00000449116 KIF24Q5T7B8 1368 aa19.73■□□□□ 0.75
SHANK2-210ENST00000449116 ZC3H6P61129 1189 aaKnown RBP19.73■□□□□ 0.75
SHANK2-210ENST00000449116 SPATA31A6Q5VVP1 1343 aa19.73■□□□□ 0.75
SHANK2-210ENST00000449116 RTL1A6NKG5 1358 aa19.71■□□□□ 0.75
SHANK2-210ENST00000449116 FLT4P35916 1363 aa19.71■□□□□ 0.75
SHANK2-210ENST00000449116 KIAA0232Q92628 1395 aa19.71■□□□□ 0.75
SHANK2-210ENST00000449116 CCER2I3L3R5 266 aa19.71■□□□□ 0.75
SHANK2-210ENST00000449116 PPM1GO15355 546 aaPredicted RBP19.71■□□□□ 0.75
SHANK2-210ENST00000449116 AMPHP49418 695 aa19.71■□□□□ 0.75
SHANK2-210ENST00000449116 CDK12Q9NYV4 1490 aaPredicted RBP19.71■□□□□ 0.75
SHANK2-210ENST00000449116 LTN1O94822 1766 aa19.7■□□□□ 0.74
SHANK2-210ENST00000449116 ZBTB7CA1YPR0 619 aa19.7■□□□□ 0.74
SHANK2-210ENST00000449116 CFAP53Q96M91 514 aa19.7■□□□□ 0.74
SHANK2-210ENST00000449116 PEAK1Q9H792 1746 aa19.7■□□□□ 0.74
SHANK2-210ENST00000449116 NUTM2BA6NNL0 878 aaPredicted RBP19.69■□□□□ 0.74
SHANK2-210ENST00000449116 NUTM2EB1AL46 878 aaPredicted RBP19.69■□□□□ 0.74
SHANK2-210ENST00000449116 NUTM2AQ8IVF1 878 aaPredicted RBP19.69■□□□□ 0.74
SHANK2-210ENST00000449116 PRDM11Q9NQV5 511 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms