RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
POLR1B-209ENST00000448770 MFAP1P55081 439 aaKnown RBP17.37■□□□□ 0.37
POLR1B-209ENST00000448770 PUS7Q96PZ0 661 aaKnown RBP17.37■□□□□ 0.37
POLR1B-209ENST00000448770 NOB1Q9ULX3 412 aaKnown RBP17.37■□□□□ 0.37
POLR1B-209ENST00000448770 ITPRIPQ8IWB1 547 aa17.36■□□□□ 0.37
POLR1B-209ENST00000448770 TMEM57Q8N5G2 664 aa17.36■□□□□ 0.37
POLR1B-209ENST00000448770 UPF2Q9HAU5 1272 aaKnown RBP17.36■□□□□ 0.37
POLR1B-209ENST00000448770 PTPRMP28827 1452 aa17.35■□□□□ 0.37
POLR1B-209ENST00000448770 MYO5BQ9ULV0 1848 aa17.35■□□□□ 0.37
POLR1B-209ENST00000448770 FYB1O15117 783 aa17.35■□□□□ 0.37
POLR1B-209ENST00000448770 RAPGEF3O95398 923 aa17.35■□□□□ 0.37
POLR1B-209ENST00000448770 IDI1Q13907 227 aa17.35■□□□□ 0.37
POLR1B-209ENST00000448770 CYB5RLQ6IPT4 315 aa17.35■□□□□ 0.37
POLR1B-209ENST00000448770 ATF7IPQ6VMQ6 1270 aa17.35■□□□□ 0.37
POLR1B-209ENST00000448770 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
POLR1B-209ENST00000448770 C22orf23Q9BZE7 217 aa17.34■□□□□ 0.37
POLR1B-209ENST00000448770 CFAP74Q9C0B2 1584 aa17.34■□□□□ 0.37
POLR1B-209ENST00000448770 MINK1Q8N4C8 1332 aaPredicted RBP17.34■□□□□ 0.37
POLR1B-209ENST00000448770 VGFO15240 615 aaPredicted RBP17.33■□□□□ 0.37
POLR1B-209ENST00000448770 FBLN1P23142 703 aa17.33■□□□□ 0.37
POLR1B-209ENST00000448770 SRPK2P78362 688 aaKnown RBP17.33■□□□□ 0.37
POLR1B-209ENST00000448770 SMC5Q8IY18 1101 aa17.33■□□□□ 0.36
POLR1B-209ENST00000448770 ANKRD26Q9UPS8 1709 aa17.32■□□□□ 0.36
POLR1B-209ENST00000448770 CT47B1P0C2W7 299 aaPredicted RBP17.32■□□□□ 0.36
POLR1B-209ENST00000448770 ZBTB40Q9NUA8 1239 aa17.32■□□□□ 0.36
POLR1B-209ENST00000448770 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
POLR1B-209ENST00000448770 RIPK4P57078 832 aa17.31■□□□□ 0.36
POLR1B-209ENST00000448770 ARXQ96QS3 562 aa17.31■□□□□ 0.36
POLR1B-209ENST00000448770 DDX19BQ9UMR2 479 aa17.31■□□□□ 0.36
POLR1B-209ENST00000448770 ZNF692Q9BU19 519 aaPredicted RBP17.3■□□□□ 0.36
POLR1B-209ENST00000448770 LRRC7Q96NW7 1537 aa17.3■□□□□ 0.36
POLR1B-209ENST00000448770 PRAM1Q96QH2 718 aa17.29■□□□□ 0.36
POLR1B-209ENST00000448770 RRAGDQ9NQL2 400 aaPredicted RBP17.29■□□□□ 0.36
POLR1B-209ENST00000448770 MCM4P33991 863 aa17.29■□□□□ 0.36
POLR1B-209ENST00000448770 FAM43AQ8N2R8 423 aa17.29■□□□□ 0.36
POLR1B-209ENST00000448770 CLTCQ00610 1675 aaKnown RBP17.29■□□□□ 0.36
POLR1B-209ENST00000448770 PNPLA6Q8IY17 1366 aa17.28■□□□□ 0.36
POLR1B-209ENST00000448770 IL16Q14005 1332 aa17.28■□□□□ 0.36
POLR1B-209ENST00000448770 MED14O60244 1454 aa17.27■□□□□ 0.36
POLR1B-209ENST00000448770 GZF1Q9H116 711 aaPredicted RBP17.27■□□□□ 0.36
POLR1B-209ENST00000448770 PRKCSHP14314 528 aaPredicted RBP17.27■□□□□ 0.35
POLR1B-209ENST00000448770 LNPKQ9C0E8 428 aa17.27■□□□□ 0.35
POLR1B-209ENST00000448770 TMEM131LA2VDJ0 1609 aa17.27■□□□□ 0.35
POLR1B-209ENST00000448770 ZFYVE9O95405 1425 aa17.27■□□□□ 0.35
POLR1B-209ENST00000448770 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
POLR1B-209ENST00000448770 PANK2Q9BZ23 570 aa17.26■□□□□ 0.35
POLR1B-209ENST00000448770 DIAPH1O60610 1272 aaKnown RBP17.26■□□□□ 0.35
POLR1B-209ENST00000448770 XRCC6P12956 609 aaKnown RBP eCLIP17.26■□□□□ 0.35
POLR1B-209ENST00000448770 FSD2A1L4K1 749 aa17.25■□□□□ 0.35
POLR1B-209ENST00000448770 NUCB1Q02818 461 aa17.25■□□□□ 0.35
POLR1B-209ENST00000448770 ARHGAP31Q2M1Z3 1444 aa17.25■□□□□ 0.35
POLR1B-209ENST00000448770 YTHDC2Q9H6S0 1430 aaKnown RBP17.25■□□□□ 0.35
POLR1B-209ENST00000448770 YEATS2Q9ULM3 1422 aa17.25■□□□□ 0.35
POLR1B-209ENST00000448770 NCOA3Q9Y6Q9 1424 aa17.25■□□□□ 0.35
POLR1B-209ENST00000448770 ATAD2Q6PL18 1390 aa17.24■□□□□ 0.35
POLR1B-209ENST00000448770 NEO1Q92859 1461 aa17.24■□□□□ 0.35
POLR1B-209ENST00000448770 DDIT3P35638 169 aa17.24■□□□□ 0.35
POLR1B-209ENST00000448770 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
POLR1B-209ENST00000448770 C1orf115Q9H7X2 142 aa17.24■□□□□ 0.35
POLR1B-209ENST00000448770 ARHGEF40Q8TER5 1519 aa17.24■□□□□ 0.35
POLR1B-209ENST00000448770 CDC42BPGQ6DT37 1551 aa17.24■□□□□ 0.35
POLR1B-209ENST00000448770 FAM135BQ49AJ0 1406 aa17.23■□□□□ 0.35
POLR1B-209ENST00000448770 KIF20BQ96Q89 1820 aa17.23■□□□□ 0.35
POLR1B-209ENST00000448770 PHACTR3Q96KR7 559 aa17.23■□□□□ 0.35
POLR1B-209ENST00000448770 CABP1Q9NZU7 370 aa17.23■□□□□ 0.35
POLR1B-209ENST00000448770 CHMP5Q9NZZ3 219 aa17.23■□□□□ 0.35
POLR1B-209ENST00000448770 DIP2BQ9P265 1576 aa17.23■□□□□ 0.35
POLR1B-209ENST00000448770 PPIP5K1Q6PFW1 1433 aa17.23■□□□□ 0.35
POLR1B-209ENST00000448770 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
POLR1B-209ENST00000448770 TSPYL6Q8N831 410 aa17.23■□□□□ 0.35
POLR1B-209ENST00000448770 PREX1Q8TCU6 1659 aa17.23■□□□□ 0.35
POLR1B-209ENST00000448770 KIF16BQ96L93 1317 aa17.23■□□□□ 0.35
POLR1B-209ENST00000448770 TERF2IPQ9NYB0 399 aa17.22■□□□□ 0.35
POLR1B-209ENST00000448770 KIF2CQ99661 725 aa17.22■□□□□ 0.35
POLR1B-209ENST00000448770 CDK19Q9BWU1 502 aa17.22■□□□□ 0.35
POLR1B-209ENST00000448770 CD2BP2O95400 341 aaKnown RBP17.21■□□□□ 0.35
POLR1B-209ENST00000448770 CHD1LQ86WJ1 897 aa17.21■□□□□ 0.35
POLR1B-209ENST00000448770 RBM25P49756 843 aaKnown RBP17.21■□□□□ 0.34
POLR1B-209ENST00000448770 FBXO31Q5XUX0 539 aaPredicted RBP17.21■□□□□ 0.34
POLR1B-209ENST00000448770 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.21■□□□□ 0.34
POLR1B-209ENST00000448770 POLKQ9UBT6 870 aa17.21■□□□□ 0.34
POLR1B-209ENST00000448770 TRAK2O60296 914 aa17.2■□□□□ 0.34
POLR1B-209ENST00000448770 HMOX1P09601 288 aa17.2■□□□□ 0.34
POLR1B-209ENST00000448770 RICTORQ6R327 1708 aa17.2■□□□□ 0.34
POLR1B-209ENST00000448770 ALKQ9UM73 1620 aa17.2■□□□□ 0.34
POLR1B-209ENST00000448770 ALDH1L2Q3SY69 923 aa17.2■□□□□ 0.34
POLR1B-209ENST00000448770 L1TD1Q5T7N2 865 aaKnown RBP17.2■□□□□ 0.34
POLR1B-209ENST00000448770 SIRT2Q8IXJ6 389 aa17.2■□□□□ 0.34
POLR1B-209ENST00000448770 ZBTB7BO15156 539 aaPredicted RBP17.19■□□□□ 0.34
POLR1B-209ENST00000448770 VAMP4O75379 141 aa17.18■□□□□ 0.34
POLR1B-209ENST00000448770 HSCBQ8IWL3 235 aa17.18■□□□□ 0.34
POLR1B-209ENST00000448770 MRPL50Q8N5N7 158 aaKnown RBP17.18■□□□□ 0.34
POLR1B-209ENST00000448770 SLC52A1Q9NWF4 448 aa17.18■□□□□ 0.34
POLR1B-209ENST00000448770 GOLGA6L3A6NEY3 463 aa17.18■□□□□ 0.34
POLR1B-209ENST00000448770 FCHSD2O94868 740 aa17.18■□□□□ 0.34
POLR1B-209ENST00000448770 ELL2O00472 640 aaPredicted RBP17.17■□□□□ 0.34
POLR1B-209ENST00000448770 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
POLR1B-209ENST00000448770 PTCH1Q13635 1447 aa17.16■□□□□ 0.34
POLR1B-209ENST00000448770 HDGFL2Q7Z4V5 671 aaPredicted RBP17.16■□□□□ 0.34
POLR1B-209ENST00000448770 WAPLQ7Z5K2 1190 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms