RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 ATF7IPQ6VMQ6 1270 aa20.75■□□□□ 0.91
PBX3-207ENST00000447726 NEXMIFQ5QGS0 1516 aa20.75■□□□□ 0.91
PBX3-207ENST00000447726 SIGLEC1Q9BZZ2 1709 aa20.75■□□□□ 0.91
PBX3-207ENST00000447726 FYB1O15117 783 aa20.74■□□□□ 0.91
PBX3-207ENST00000447726 NPM1P06748 294 aaKnown RBP eCLIP20.74■□□□□ 0.91
PBX3-207ENST00000447726 HDAC1Q13547 482 aaPredicted RBP20.74■□□□□ 0.91
PBX3-207ENST00000447726 C22orf23Q9BZE7 217 aa20.74■□□□□ 0.91
PBX3-207ENST00000447726 DDX19BQ9UMR2 479 aa20.74■□□□□ 0.91
PBX3-207ENST00000447726 TMEM57Q8N5G2 664 aa20.73■□□□□ 0.91
PBX3-207ENST00000447726 CAMSAP1Q5T5Y3 1602 aa20.73■□□□□ 0.91
PBX3-207ENST00000447726 MINK1Q8N4C8 1332 aaPredicted RBP20.73■□□□□ 0.91
PBX3-207ENST00000447726 RIPK4P57078 832 aa20.73■□□□□ 0.91
PBX3-207ENST00000447726 COL3A1P02461 1466 aaPredicted RBP20.72■□□□□ 0.91
PBX3-207ENST00000447726 SMC5Q8IY18 1101 aa20.69■□□□□ 0.9
PBX3-207ENST00000447726 PRAM1Q96QH2 718 aa20.69■□□□□ 0.9
PBX3-207ENST00000447726 ZBTB40Q9NUA8 1239 aa20.69■□□□□ 0.9
PBX3-207ENST00000447726 PIK3C2BO00750 1634 aa20.68■□□□□ 0.9
PBX3-207ENST00000447726 DIAPH1O60610 1272 aaKnown RBP20.68■□□□□ 0.9
PBX3-207ENST00000447726 TERF2IPQ9NYB0 399 aa20.68■□□□□ 0.9
PBX3-207ENST00000447726 IL16Q14005 1332 aa20.67■□□□□ 0.9
PBX3-207ENST00000447726 FBLN1P23142 703 aa20.66■□□□□ 0.9
PBX3-207ENST00000447726 ARXQ96QS3 562 aa20.66■□□□□ 0.9
PBX3-207ENST00000447726 CD163L1Q9NR16 1453 aa20.66■□□□□ 0.9
PBX3-207ENST00000447726 MCM4P33991 863 aa20.65■□□□□ 0.9
PBX3-207ENST00000447726 ATAD2Q6PL18 1390 aa20.65■□□□□ 0.9
PBX3-207ENST00000447726 LNPKQ9C0E8 428 aa20.64■□□□□ 0.89
PBX3-207ENST00000447726 FAM43AQ8N2R8 423 aa20.63■□□□□ 0.89
PBX3-207ENST00000447726 KIF16BQ96L93 1317 aa20.63■□□□□ 0.89
PBX3-207ENST00000447726 PTPRMP28827 1452 aa20.63■□□□□ 0.89
PBX3-207ENST00000447726 IPO8O15397 1037 aaKnown RBP20.63■□□□□ 0.89
PBX3-207ENST00000447726 GZF1Q9H116 711 aaPredicted RBP20.63■□□□□ 0.89
PBX3-207ENST00000447726 CABP1Q9NZU7 370 aa20.63■□□□□ 0.89
PBX3-207ENST00000447726 SLC52A1Q9NWF4 448 aa20.62■□□□□ 0.89
PBX3-207ENST00000447726 CFAP74Q9C0B2 1584 aa20.62■□□□□ 0.89
PBX3-207ENST00000447726 ZFYVE9O95405 1425 aa20.62■□□□□ 0.89
PBX3-207ENST00000447726 CHMP5Q9NZZ3 219 aa20.62■□□□□ 0.89
PBX3-207ENST00000447726 PNPLA6Q8IY17 1366 aa20.61■□□□□ 0.89
PBX3-207ENST00000447726 NUCB1Q02818 461 aa20.61■□□□□ 0.89
PBX3-207ENST00000447726 CDK19Q9BWU1 502 aa20.61■□□□□ 0.89
PBX3-207ENST00000447726 PRKAR2BP31323 418 aa20.6■□□□□ 0.89
PBX3-207ENST00000447726 L1TD1Q5T7N2 865 aaKnown RBP20.6■□□□□ 0.89
PBX3-207ENST00000447726 HDGFL2Q7Z4V5 671 aaPredicted RBP20.6■□□□□ 0.89
PBX3-207ENST00000447726 ARHGAP31Q2M1Z3 1444 aa20.6■□□□□ 0.89
PBX3-207ENST00000447726 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.59■□□□□ 0.89
PBX3-207ENST00000447726 YTHDC2Q9H6S0 1430 aaKnown RBP20.59■□□□□ 0.89
PBX3-207ENST00000447726 MED14O60244 1454 aa20.59■□□□□ 0.89
PBX3-207ENST00000447726 ALDH1L2Q3SY69 923 aa20.59■□□□□ 0.89
PBX3-207ENST00000447726 THUMPD2Q9BTF0 503 aaKnown RBP20.59■□□□□ 0.89
PBX3-207ENST00000447726 FCHSD2O94868 740 aa20.58■□□□□ 0.89
PBX3-207ENST00000447726 CHD1LQ86WJ1 897 aa20.58■□□□□ 0.88
PBX3-207ENST00000447726 HSCBQ8IWL3 235 aa20.58■□□□□ 0.88
PBX3-207ENST00000447726 PNNQ9H307 717 aaKnown RBP20.58■□□□□ 0.88
PBX3-207ENST00000447726 RSPH6AQ9H0K4 717 aa20.57■□□□□ 0.88
PBX3-207ENST00000447726 XRCC6P12956 609 aaKnown RBP eCLIP20.57■□□□□ 0.88
PBX3-207ENST00000447726 PHACTR3Q96KR7 559 aa20.57■□□□□ 0.88
PBX3-207ENST00000447726 ZNF692Q9BU19 519 aaPredicted RBP20.57■□□□□ 0.88
PBX3-207ENST00000447726 DIP2CQ9Y2E4 1556 aa20.57■□□□□ 0.88
PBX3-207ENST00000447726 HMOX1P09601 288 aa20.57■□□□□ 0.88
PBX3-207ENST00000447726 C1orf115Q9H7X2 142 aa20.57■□□□□ 0.88
PBX3-207ENST00000447726 FBXO31Q5XUX0 539 aaPredicted RBP20.56■□□□□ 0.88
PBX3-207ENST00000447726 POLKQ9UBT6 870 aa20.56■□□□□ 0.88
PBX3-207ENST00000447726 TRAK2O60296 914 aa20.55■□□□□ 0.88
PBX3-207ENST00000447726 MYO5BQ9ULV0 1848 aa20.55■□□□□ 0.88
PBX3-207ENST00000447726 FSD2A1L4K1 749 aa20.55■□□□□ 0.88
PBX3-207ENST00000447726 GOLGA6L3A6NEY3 463 aa20.55■□□□□ 0.88
PBX3-207ENST00000447726 RBM25P49756 843 aaKnown RBP20.55■□□□□ 0.88
PBX3-207ENST00000447726 TSPYL6Q8N831 410 aa20.55■□□□□ 0.88
PBX3-207ENST00000447726 RRAGDQ9NQL2 400 aaPredicted RBP20.55■□□□□ 0.88
PBX3-207ENST00000447726 ZBTB7BO15156 539 aaPredicted RBP20.54■□□□□ 0.88
PBX3-207ENST00000447726 YEATS2Q9ULM3 1422 aa20.54■□□□□ 0.88
PBX3-207ENST00000447726 LRRC7Q96NW7 1537 aa20.54■□□□□ 0.88
PBX3-207ENST00000447726 ELL2O00472 640 aaPredicted RBP20.54■□□□□ 0.88
PBX3-207ENST00000447726 VAMP4O75379 141 aa20.53■□□□□ 0.88
PBX3-207ENST00000447726 ANKRD45Q5TZF3 282 aa20.53■□□□□ 0.88
PBX3-207ENST00000447726 PANK2Q9BZ23 570 aa20.53■□□□□ 0.88
PBX3-207ENST00000447726 ANKRD26Q9UPS8 1709 aa20.53■□□□□ 0.88
PBX3-207ENST00000447726 FAM135BQ49AJ0 1406 aa20.52■□□□□ 0.88
PBX3-207ENST00000447726 PPIP5K1Q6PFW1 1433 aa20.52■□□□□ 0.88
PBX3-207ENST00000447726 ARHGEF40Q8TER5 1519 aa20.52■□□□□ 0.88
PBX3-207ENST00000447726 TMEM131LA2VDJ0 1609 aa20.52■□□□□ 0.87
PBX3-207ENST00000447726 WAPLQ7Z5K2 1190 aa20.51■□□□□ 0.87
PBX3-207ENST00000447726 MRPL50Q8N5N7 158 aaKnown RBP20.51■□□□□ 0.87
PBX3-207ENST00000447726 NEO1Q92859 1461 aa20.51■□□□□ 0.87
PBX3-207ENST00000447726 DDIT3P35638 169 aa20.51■□□□□ 0.87
PBX3-207ENST00000447726 BRPF1P55201 1214 aaPredicted RBP20.51■□□□□ 0.87
PBX3-207ENST00000447726 NFE2L2Q16236 605 aa20.51■□□□□ 0.87
PBX3-207ENST00000447726 BMP2KLQ5H9B9 411 aa20.51■□□□□ 0.87
PBX3-207ENST00000447726 EIF5BO60841 1220 aaKnown RBP20.5■□□□□ 0.87
PBX3-207ENST00000447726 EMILIN1Q9Y6C2 1016 aa20.5■□□□□ 0.87
PBX3-207ENST00000447726 CLTCQ00610 1675 aaKnown RBP20.49■□□□□ 0.87
PBX3-207ENST00000447726 NCOA3Q9Y6Q9 1424 aa20.49■□□□□ 0.87
PBX3-207ENST00000447726 SIRT2Q8IXJ6 389 aa20.49■□□□□ 0.87
PBX3-207ENST00000447726 SNX21Q969T3 373 aa20.49■□□□□ 0.87
PBX3-207ENST00000447726 KIF2CQ99661 725 aa20.49■□□□□ 0.87
PBX3-207ENST00000447726 ZNF428Q96B54 188 aa20.49■□□□□ 0.87
PBX3-207ENST00000447726 STAG3Q9UJ98 1225 aa20.48■□□□□ 0.87
PBX3-207ENST00000447726 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
PBX3-207ENST00000447726 MBIPQ9NS73 344 aa20.47■□□□□ 0.87
PBX3-207ENST00000447726 ALKQ9UM73 1620 aa20.47■□□□□ 0.87
PBX3-207ENST00000447726 CD2BP2O95400 341 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms