RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 ABCA3Q99758 1704 aa34.21■■■■□ 3.07
MRPL28-205ENST00000447696 EP400Q96L91 3159 aa34.2■■■■□ 3.07
MRPL28-205ENST00000447696 HAP1P54257 671 aaPredicted RBP34.2■■■■□ 3.07
MRPL28-205ENST00000447696 ACEP12821 1306 aa34.17■■■■□ 3.06
MRPL28-205ENST00000447696 EVC2Q86UK5 1308 aa34.17■■■■□ 3.06
MRPL28-205ENST00000447696 CABLES1Q8TDN4 633 aa34.17■■■■□ 3.06
MRPL28-205ENST00000447696 SLIT2O94813 1529 aa34.16■■■■□ 3.06
MRPL28-205ENST00000447696 PPIP5K1Q6PFW1 1433 aa34.16■■■■□ 3.06
MRPL28-205ENST00000447696 UNC5CLQ8IV45 518 aa34.16■■■■□ 3.06
MRPL28-205ENST00000447696 CABP2Q9NPB3 220 aa34.16■■■■□ 3.06
MRPL28-205ENST00000447696 CARD11Q9BXL7 1154 aa34.15■■■■□ 3.06
MRPL28-205ENST00000447696 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.14■■■■□ 3.06
MRPL28-205ENST00000447696 BLMP54132 1417 aaPredicted RBP34.13■■■■□ 3.05
MRPL28-205ENST00000447696 SBNO2Q9Y2G9 1366 aa34.13■■■■□ 3.05
MRPL28-205ENST00000447696 PAK3O75914 559 aaPredicted RBP34.13■■■■□ 3.05
MRPL28-205ENST00000447696 CLSPNQ9HAW4 1339 aa34.11■■■■□ 3.05
MRPL28-205ENST00000447696 BRD4O60885 1362 aaPredicted RBP34.09■■■■□ 3.05
MRPL28-205ENST00000447696 CRYBG1Q9Y4K1 1723 aa34.08■■■■□ 3.05
MRPL28-205ENST00000447696 PLEKHG5O94827 1062 aa34.08■■■■□ 3.05
MRPL28-205ENST00000447696 PCGF6Q9BYE7 350 aa34.07■■■■□ 3.04
MRPL28-205ENST00000447696 SF3B2Q13435 895 aaKnown RBP34.06■■■■□ 3.04
MRPL28-205ENST00000447696 NWD2Q9ULI1 1742 aa34.06■■■■□ 3.04
MRPL28-205ENST00000447696 PLCH1Q4KWH8 1693 aa34.05■■■■□ 3.04
MRPL28-205ENST00000447696 CABP1Q9NZU7 370 aa34.04■■■■□ 3.04
MRPL28-205ENST00000447696 FAM83GA6ND36 823 aa34.01■■■■□ 3.03
MRPL28-205ENST00000447696 TIMELESSQ9UNS1 1208 aa34.01■■■■□ 3.03
MRPL28-205ENST00000447696 GLI3P10071 1580 aa34.01■■■■□ 3.03
MRPL28-205ENST00000447696 USP6P35125 1406 aa34■■■■□ 3.03
MRPL28-205ENST00000447696 COL14A1Q05707 1796 aaKnown RBP33.99■■■■□ 3.03
MRPL28-205ENST00000447696 PHRF1Q9P1Y6 1649 aaKnown RBP33.98■■■■□ 3.03
MRPL28-205ENST00000447696 VPS72Q15906 364 aa33.98■■■■□ 3.03
MRPL28-205ENST00000447696 SEPT12Q8IYM1 358 aa33.97■■■■□ 3.03
MRPL28-205ENST00000447696 ABTB2Q8N961 1025 aa33.96■■■■□ 3.03
MRPL28-205ENST00000447696 ONECUT3O60422 494 aaPredicted RBP33.95■■■■□ 3.03
MRPL28-205ENST00000447696 USP19O94966 1318 aa33.94■■■■□ 3.02
MRPL28-205ENST00000447696 NUTM2GQ5VZR2 741 aa33.93■■■■□ 3.02
MRPL28-205ENST00000447696 SSH2Q76I76 1423 aa33.93■■■■□ 3.02
MRPL28-205ENST00000447696 NRAPQ86VF7 1730 aa33.93■■■■□ 3.02
MRPL28-205ENST00000447696 DEFB132Q7Z7B7 95 aa33.92■■■■□ 3.02
MRPL28-205ENST00000447696 ZNF692Q9BU19 519 aaPredicted RBP33.92■■■■□ 3.02
MRPL28-205ENST00000447696 PRDM11Q9NQV5 511 aa33.92■■■■□ 3.02
MRPL28-205ENST00000447696 NLRP13Q86W25 1043 aa33.91■■■■□ 3.02
MRPL28-205ENST00000447696 KIAA0232Q92628 1395 aa33.9■■■■□ 3.02
MRPL28-205ENST00000447696 BTG4Q9NY30 223 aa33.9■■■■□ 3.02
MRPL28-205ENST00000447696 NRKQ7Z2Y5 1582 aa33.89■■■■□ 3.02
MRPL28-205ENST00000447696 KRT27Q7Z3Y8 459 aa33.89■■■■□ 3.02
MRPL28-205ENST00000447696 CPSF1Q10570 1443 aaKnown RBP33.88■■■■□ 3.01
MRPL28-205ENST00000447696 AKAP12Q02952 1782 aa33.88■■■■□ 3.01
MRPL28-205ENST00000447696 PUS7Q96PZ0 661 aaKnown RBP33.88■■■■□ 3.01
MRPL28-205ENST00000447696 SLC24A1O60721 1099 aa33.87■■■■□ 3.01
MRPL28-205ENST00000447696 CCDC9Q9Y3X0 531 aaKnown RBP33.87■■■■□ 3.01
MRPL28-205ENST00000447696 CPDO75976 1380 aa33.85■■■■□ 3.01
MRPL28-205ENST00000447696 TESK2Q96S53 571 aa33.85■■■■□ 3.01
MRPL28-205ENST00000447696 BRWD3Q6RI45 1802 aa33.84■■■■□ 3.01
MRPL28-205ENST00000447696 ST20-MTHFSA0A0A6YYL1 179 aa33.84■■■■□ 3.01
MRPL28-205ENST00000447696 BAG6P46379 1132 aa33.83■■■■□ 3.01
MRPL28-205ENST00000447696 LRP5O75197 1615 aa33.82■■■■□ 3.01
MRPL28-205ENST00000447696 ZC3H6P61129 1189 aaKnown RBP33.82■■■■□ 3
MRPL28-205ENST00000447696 PIK3C2AO00443 1686 aa33.82■■■■□ 3
MRPL28-205ENST00000447696 TTC21BQ7Z4L5 1316 aa33.81■■■■□ 3
MRPL28-205ENST00000447696 TTC21AQ8NDW8 1320 aa33.81■■■■□ 3
MRPL28-205ENST00000447696 SLIT3O75094 1523 aa33.81■■■■□ 3
MRPL28-205ENST00000447696 KTN1Q86UP2 1357 aaKnown RBP33.81■■■■□ 3
MRPL28-205ENST00000447696 USP47Q96K76 1375 aa33.81■■■■□ 3
MRPL28-205ENST00000447696 GCP02774 474 aa33.8■■■■□ 3
MRPL28-205ENST00000447696 NLRP6P59044 892 aa33.8■■■■□ 3
MRPL28-205ENST00000447696 MON2Q7Z3U7 1717 aa33.79■■■■□ 3
MRPL28-205ENST00000447696 CHRNA2Q15822 529 aa33.78■■■■□ 3
MRPL28-205ENST00000447696 CCER1Q8TC90 406 aaPredicted RBP33.78■■■■□ 3
MRPL28-205ENST00000447696 CD163L1Q9NR16 1453 aa33.77■■■■□ 3
MRPL28-205ENST00000447696 SPATA31A5Q5VU36 1347 aa33.76■■■□□ 2.99
MRPL28-205ENST00000447696 SPATA31A7Q8IWB4 1347 aa33.76■■■□□ 2.99
MRPL28-205ENST00000447696 NINLQ9Y2I6 1382 aa33.75■■■□□ 2.99
MRPL28-205ENST00000447696 LMO7Q8WWI1 1683 aa33.74■■■□□ 2.99
MRPL28-205ENST00000447696 TMC1Q8TDI8 760 aa33.74■■■□□ 2.99
MRPL28-205ENST00000447696 A0A0G2JS52 829 aa33.73■■■□□ 2.99
MRPL28-205ENST00000447696 MYT1Q01538 1121 aa33.73■■■□□ 2.99
MRPL28-205ENST00000447696 HDGFL2Q7Z4V5 671 aaPredicted RBP33.72■■■□□ 2.99
MRPL28-205ENST00000447696 SLC12A5Q9H2X9 1139 aa33.71■■■□□ 2.99
MRPL28-205ENST00000447696 TERF2IPQ9NYB0 399 aa33.71■■■□□ 2.99
MRPL28-205ENST00000447696 CAMTA1Q9Y6Y1 1673 aa33.7■■■□□ 2.99
MRPL28-205ENST00000447696 KCNH5Q8NCM2 988 aa33.68■■■□□ 2.98
MRPL28-205ENST00000447696 EDC4Q6P2E9 1401 aaKnown RBP33.68■■■□□ 2.98
MRPL28-205ENST00000447696 TMF1P82094 1093 aa33.67■■■□□ 2.98
MRPL28-205ENST00000447696 FAM98CQ17RN3 349 aaKnown RBP33.67■■■□□ 2.98
MRPL28-205ENST00000447696 STRN4Q9NRL3 753 aa33.67■■■□□ 2.98
MRPL28-205ENST00000447696 SPATA31A1Q5TZJ5 1347 aa33.67■■■□□ 2.98
MRPL28-205ENST00000447696 AATKQ6ZMQ8 1374 aa33.67■■■□□ 2.98
MRPL28-205ENST00000447696 A0A1W2PP64 1363 aa33.66■■■□□ 2.98
MRPL28-205ENST00000447696 USP31Q70CQ4 1352 aa33.66■■■□□ 2.98
MRPL28-205ENST00000447696 USP54Q70EL1 1684 aa33.65■■■□□ 2.98
MRPL28-205ENST00000447696 PSDA5PKW4 1024 aaPredicted RBP33.65■■■□□ 2.98
MRPL28-205ENST00000447696 EVA1CP58658 441 aa33.65■■■□□ 2.98
MRPL28-205ENST00000447696 THSD7AQ9UPZ6 1657 aa33.64■■■□□ 2.98
MRPL28-205ENST00000447696 COL5A2P05997 1499 aaPredicted RBP33.63■■■□□ 2.97
MRPL28-205ENST00000447696 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.62■■■□□ 2.97
MRPL28-205ENST00000447696 NFAT5O94916 1531 aa33.61■■■□□ 2.97
MRPL28-205ENST00000447696 CDCA8Q53HL2 280 aa33.6■■■□□ 2.97
MRPL28-205ENST00000447696 ARHGEF25Q86VW2 580 aa33.59■■■□□ 2.97
MRPL28-205ENST00000447696 DISP2A7MBM2 1401 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms