RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 SLC26A8Q96RN1 970 aa25.53■■□□□ 1.68
FAM3A-215ENST00000447601 PLIN1O60240 522 aa25.52■■□□□ 1.68
FAM3A-215ENST00000447601 DIP2AQ14689 1571 aa25.52■■□□□ 1.68
FAM3A-215ENST00000447601 PTPRUQ92729 1446 aa25.52■■□□□ 1.68
FAM3A-215ENST00000447601 ZNF692Q9BU19 519 aaPredicted RBP25.51■■□□□ 1.67
FAM3A-215ENST00000447601 WDR63Q8IWG1 891 aa25.51■■□□□ 1.67
FAM3A-215ENST00000447601 DMRT2Q9Y5R5 561 aa25.5■■□□□ 1.67
FAM3A-215ENST00000447601 U2SURPO15042 1029 aaKnown RBP25.49■■□□□ 1.67
FAM3A-215ENST00000447601 PTCH1Q13635 1447 aa25.49■■□□□ 1.67
FAM3A-215ENST00000447601 DIAPH1O60610 1272 aaKnown RBP25.49■■□□□ 1.67
FAM3A-215ENST00000447601 NEUROD2Q15784 382 aa25.49■■□□□ 1.67
FAM3A-215ENST00000447601 RRP7AQ9Y3A4 280 aaKnown RBP25.49■■□□□ 1.67
FAM3A-215ENST00000447601 PRR36Q9H6K5 1346 aa25.49■■□□□ 1.67
FAM3A-215ENST00000447601 AMOTL2Q9Y2J4 779 aa25.48■■□□□ 1.67
FAM3A-215ENST00000447601 RBM19Q9Y4C8 960 aaKnown RBP25.47■■□□□ 1.67
FAM3A-215ENST00000447601 PNNQ9H307 717 aaKnown RBP25.47■■□□□ 1.67
FAM3A-215ENST00000447601 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.46■■□□□ 1.67
FAM3A-215ENST00000447601 NCKAP5LQ9HCH0 1330 aa25.46■■□□□ 1.67
FAM3A-215ENST00000447601 POLKQ9UBT6 870 aa25.46■■□□□ 1.67
FAM3A-215ENST00000447601 CRBNQ96SW2 442 aa25.45■■□□□ 1.66
FAM3A-215ENST00000447601 CEP170BQ9Y4F5 1589 aaPredicted RBP25.45■■□□□ 1.66
FAM3A-215ENST00000447601 MON2Q7Z3U7 1717 aa25.45■■□□□ 1.66
FAM3A-215ENST00000447601 AATKQ6ZMQ8 1374 aa25.45■■□□□ 1.66
FAM3A-215ENST00000447601 NME9Q86XW9 330 aa25.44■■□□□ 1.66
FAM3A-215ENST00000447601 PLEKHF1Q96S99 279 aa25.44■■□□□ 1.66
FAM3A-215ENST00000447601 MAPK8IP3Q9UPT6 1336 aa25.44■■□□□ 1.66
FAM3A-215ENST00000447601 COG3Q96JB2 828 aa25.43■■□□□ 1.66
FAM3A-215ENST00000447601 PLEKHG3A1L390 1219 aa25.42■■□□□ 1.66
FAM3A-215ENST00000447601 ITSN1Q15811 1721 aa25.41■■□□□ 1.66
FAM3A-215ENST00000447601 AKAP12Q02952 1782 aa25.4■■□□□ 1.66
FAM3A-215ENST00000447601 PIK3R4Q99570 1358 aa25.4■■□□□ 1.66
FAM3A-215ENST00000447601 TOPAZ1Q8N9V7 1692 aa25.4■■□□□ 1.66
FAM3A-215ENST00000447601 C20orf194Q5TEA3 1177 aa25.4■■□□□ 1.66
FAM3A-215ENST00000447601 MYH16Q9H6N6 1097 aa25.4■■□□□ 1.66
FAM3A-215ENST00000447601 RIMS1Q86UR5 1692 aaKnown RBP25.39■■□□□ 1.66
FAM3A-215ENST00000447601 CDK12Q9NYV4 1490 aaPredicted RBP25.38■■□□□ 1.65
FAM3A-215ENST00000447601 PPM1GO15355 546 aaPredicted RBP25.38■■□□□ 1.65
FAM3A-215ENST00000447601 FCHSD2O94868 740 aa25.38■■□□□ 1.65
FAM3A-215ENST00000447601 TMPOP42166 694 aaKnown RBP25.37■■□□□ 1.65
FAM3A-215ENST00000447601 ACEP12821 1306 aa25.37■■□□□ 1.65
FAM3A-215ENST00000447601 ZRANB1Q9UGI0 708 aa25.35■■□□□ 1.65
FAM3A-215ENST00000447601 TTC21BQ7Z4L5 1316 aa25.35■■□□□ 1.65
FAM3A-215ENST00000447601 XRN1Q8IZH2 1706 aaKnown RBP25.35■■□□□ 1.65
FAM3A-215ENST00000447601 BCAR3O75815 825 aa25.35■■□□□ 1.65
FAM3A-215ENST00000447601 EMILIN1Q9Y6C2 1016 aa25.35■■□□□ 1.65
FAM3A-215ENST00000447601 USP6P35125 1406 aa25.34■■□□□ 1.65
FAM3A-215ENST00000447601 FBLN1P23142 703 aa25.33■■□□□ 1.65
FAM3A-215ENST00000447601 NRKQ7Z2Y5 1582 aa25.33■■□□□ 1.65
FAM3A-215ENST00000447601 NEFMP07197 916 aa25.33■■□□□ 1.64
FAM3A-215ENST00000447601 NUTM2FA1L443 756 aa25.32■■□□□ 1.64
FAM3A-215ENST00000447601 ANKLE2Q86XL3 938 aa25.32■■□□□ 1.64
FAM3A-215ENST00000447601 ADAMTSL3P82987 1691 aa25.31■■□□□ 1.64
FAM3A-215ENST00000447601 IL16Q14005 1332 aa25.31■■□□□ 1.64
FAM3A-215ENST00000447601 RSPH6AQ9H0K4 717 aa25.3■■□□□ 1.64
FAM3A-215ENST00000447601 TRIM35Q9UPQ4 493 aa25.3■■□□□ 1.64
FAM3A-215ENST00000447601 LRRC7Q96NW7 1537 aa25.3■■□□□ 1.64
FAM3A-215ENST00000447601 ZNF142P52746 1687 aaPredicted RBP25.3■■□□□ 1.64
FAM3A-215ENST00000447601 IL13P35225 146 aa25.3■■□□□ 1.64
FAM3A-215ENST00000447601 RIPK4P57078 832 aa25.29■■□□□ 1.64
FAM3A-215ENST00000447601 PDE3AQ14432 1141 aa25.29■■□□□ 1.64
FAM3A-215ENST00000447601 OVOS2A0A0J9YW53 1432 aa25.28■■□□□ 1.64
FAM3A-215ENST00000447601 OVOS2Q6IE36 1432 aa25.28■■□□□ 1.64
FAM3A-215ENST00000447601 CT47B1P0C2W7 299 aaPredicted RBP25.28■■□□□ 1.64
FAM3A-215ENST00000447601 KCNA6P17658 529 aa25.28■■□□□ 1.64
FAM3A-215ENST00000447601 PRKAR2BP31323 418 aa25.28■■□□□ 1.64
FAM3A-215ENST00000447601 RARSP54136 660 aaKnown RBP25.28■■□□□ 1.64
FAM3A-215ENST00000447601 ANKARQ7Z5J8 1434 aa25.28■■□□□ 1.64
FAM3A-215ENST00000447601 SSH2Q76I76 1423 aa25.27■■□□□ 1.64
FAM3A-215ENST00000447601 TTC21AQ8NDW8 1320 aa25.27■■□□□ 1.64
FAM3A-215ENST00000447601 MAP2P11137 1827 aaKnown RBP25.26■■□□□ 1.63
FAM3A-215ENST00000447601 CANXP27824 592 aaKnown RBP25.26■■□□□ 1.63
FAM3A-215ENST00000447601 RRS1Q15050 365 aaKnown RBP25.26■■□□□ 1.63
FAM3A-215ENST00000447601 FANCIQ9NVI1 1328 aa25.24■■□□□ 1.63
FAM3A-215ENST00000447601 USP31Q70CQ4 1352 aa25.23■■□□□ 1.63
FAM3A-215ENST00000447601 TCERG1O14776 1098 aaKnown RBP25.22■■□□□ 1.63
FAM3A-215ENST00000447601 NGDNQ8NEJ9 315 aaKnown RBP25.22■■□□□ 1.63
FAM3A-215ENST00000447601 HMOX1P09601 288 aa25.21■■□□□ 1.63
FAM3A-215ENST00000447601 NFE2L2Q16236 605 aa25.21■■□□□ 1.63
FAM3A-215ENST00000447601 PMFBP1Q8TBY8 1022 aa25.21■■□□□ 1.63
FAM3A-215ENST00000447601 CENPQQ7L2Z9 268 aaPredicted RBP25.21■■□□□ 1.63
FAM3A-215ENST00000447601 KDM2BQ8NHM5 1336 aa25.2■■□□□ 1.62
FAM3A-215ENST00000447601 TSR2Q969E8 191 aaKnown RBP25.19■■□□□ 1.62
FAM3A-215ENST00000447601 FRAT1Q92837 279 aaPredicted RBP25.19■■□□□ 1.62
FAM3A-215ENST00000447601 CALD1Q05682 793 aaKnown RBP25.18■■□□□ 1.62
FAM3A-215ENST00000447601 NALCNQ8IZF0 1738 aa25.17■■□□□ 1.62
FAM3A-215ENST00000447601 PHACTR3Q96KR7 559 aa25.16■■□□□ 1.62
FAM3A-215ENST00000447601 EXOSC9Q06265 439 aaKnown RBP25.16■■□□□ 1.62
FAM3A-215ENST00000447601 MS4A1P11836 297 aa25.15■■□□□ 1.62
FAM3A-215ENST00000447601 LMOD3Q0VAK6 560 aa25.14■■□□□ 1.62
FAM3A-215ENST00000447601 AAMPQ13685 434 aa25.14■■□□□ 1.62
FAM3A-215ENST00000447601 FMN2Q9NZ56 1722 aa25.14■■□□□ 1.62
FAM3A-215ENST00000447601 EIF4A2Q14240 407 aaKnown RBP25.14■■□□□ 1.61
FAM3A-215ENST00000447601 PANK1Q8TE04 598 aa25.13■■□□□ 1.61
FAM3A-215ENST00000447601 NPHP4O75161 1426 aaPredicted RBP25.13■■□□□ 1.61
FAM3A-215ENST00000447601 BCL2L13Q9BXK5 485 aa25.12■■□□□ 1.61
FAM3A-215ENST00000447601 SETD1BQ9UPS6 1966 aaKnown RBP25.12■■□□□ 1.61
FAM3A-215ENST00000447601 CHD2O14647 1828 aaKnown RBP25.12■■□□□ 1.61
FAM3A-215ENST00000447601 COG6Q9Y2V7 657 aa25.12■■□□□ 1.61
FAM3A-215ENST00000447601 CLUAP1Q96AJ1 413 aa25.09■■□□□ 1.61
FAM3A-215ENST00000447601 SMC4Q9NTJ3 1288 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms