RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 SAMD9LQ8IVG5 1584 aa9.03□□□□□ -0.96
PTPN3-205ENST00000447271 ZBTB7AO95365 584 aa9.02□□□□□ -0.97
PTPN3-205ENST00000447271 PARD3Q8TEW0 1356 aa9.01□□□□□ -0.97
PTPN3-205ENST00000447271 A0A0G2JS52 829 aa9.01□□□□□ -0.97
PTPN3-205ENST00000447271 PLXNC1O60486 1568 aa9.01□□□□□ -0.97
PTPN3-205ENST00000447271 MYT1Q01538 1121 aa9.01□□□□□ -0.97
PTPN3-205ENST00000447271 GOLGA2Q08379 1002 aa9.01□□□□□ -0.97
PTPN3-205ENST00000447271 FAM182BQ5T319 152 aa9.01□□□□□ -0.97
PTPN3-205ENST00000447271 ABHD8Q96I13 439 aa9.01□□□□□ -0.97
PTPN3-205ENST00000447271 CASZ1Q86V15 1759 aa9□□□□□ -0.97
PTPN3-205ENST00000447271 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9□□□□□ -0.97
PTPN3-205ENST00000447271 RIOK3O14730 519 aaKnown RBP9□□□□□ -0.97
PTPN3-205ENST00000447271 KIF3CO14782 793 aa9□□□□□ -0.97
PTPN3-205ENST00000447271 UNC5CLQ8IV45 518 aa9□□□□□ -0.97
PTPN3-205ENST00000447271 EFCAB3Q8N7B9 438 aa9□□□□□ -0.97
PTPN3-205ENST00000447271 ZFP91Q96JP5 570 aaPredicted RBP9□□□□□ -0.97
PTPN3-205ENST00000447271 SAMD9Q5K651 1589 aa8.99□□□□□ -0.97
PTPN3-205ENST00000447271 ARHGAP35Q9NRY4 1499 aa8.99□□□□□ -0.97
PTPN3-205ENST00000447271 SLIT1O75093 1534 aa8.99□□□□□ -0.97
PTPN3-205ENST00000447271 APBA3O96018 575 aa8.98□□□□□ -0.97
PTPN3-205ENST00000447271 C19orf44Q9H6X5 657 aa8.98□□□□□ -0.97
PTPN3-205ENST00000447271 CCDC85CA6NKD9 419 aa8.97□□□□□ -0.97
PTPN3-205ENST00000447271 FMN1Q68DA7 1419 aa8.97□□□□□ -0.97
PTPN3-205ENST00000447271 ST18O60284 1047 aa8.96□□□□□ -0.98
PTPN3-205ENST00000447271 ONECUT3O60422 494 aaPredicted RBP8.96□□□□□ -0.98
PTPN3-205ENST00000447271 PPP1R15AO75807 674 aaPredicted RBP8.96□□□□□ -0.98
PTPN3-205ENST00000447271 MS4A4AQ96JQ5 239 aa8.96□□□□□ -0.98
PTPN3-205ENST00000447271 PDGFDQ9GZP0 370 aaPredicted RBP8.96□□□□□ -0.98
PTPN3-205ENST00000447271 NCOA3Q9Y6Q9 1424 aa8.96□□□□□ -0.98
PTPN3-205ENST00000447271 TRIM37O94972 964 aa8.95□□□□□ -0.98
PTPN3-205ENST00000447271 ZEB1P37275 1124 aaPredicted RBP8.95□□□□□ -0.98
PTPN3-205ENST00000447271 TRIM26Q12899 539 aaPredicted RBP8.95□□□□□ -0.98
PTPN3-205ENST00000447271 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.95□□□□□ -0.98
PTPN3-205ENST00000447271 CCDC9Q9Y3X0 531 aaKnown RBP8.95□□□□□ -0.98
PTPN3-205ENST00000447271 CHD2O14647 1828 aaKnown RBP8.95□□□□□ -0.98
PTPN3-205ENST00000447271 GPATCH8Q9UKJ3 1502 aaKnown RBP8.95□□□□□ -0.98
PTPN3-205ENST00000447271 TOMM70O94826 608 aa8.94□□□□□ -0.98
PTPN3-205ENST00000447271 CDC42BPBQ9Y5S2 1711 aa8.94□□□□□ -0.98
PTPN3-205ENST00000447271 VGFO15240 615 aaPredicted RBP8.93□□□□□ -0.98
PTPN3-205ENST00000447271 SPAG9O60271 1321 aaKnown RBP8.93□□□□□ -0.98
PTPN3-205ENST00000447271 TET3O43151 1660 aa8.93□□□□□ -0.98
PTPN3-205ENST00000447271 CFAP65Q6ZU64 1925 aaKnown RBP8.93□□□□□ -0.98
PTPN3-205ENST00000447271 CUL9Q8IWT3 2517 aa8.92□□□□□ -0.98
PTPN3-205ENST00000447271 WASHC2CQ9Y4E1 1318 aa8.92□□□□□ -0.98
PTPN3-205ENST00000447271 RGL2O15211 777 aa8.92□□□□□ -0.98
PTPN3-205ENST00000447271 L3MBTL3Q96JM7 780 aaPredicted RBP8.92□□□□□ -0.98
PTPN3-205ENST00000447271 COL22A1Q8NFW1 1626 aaPredicted RBP8.91□□□□□ -0.98
PTPN3-205ENST00000447271 ADCY9O60503 1353 aa8.91□□□□□ -0.98
PTPN3-205ENST00000447271 MAP3K5Q99683 1374 aa8.91□□□□□ -0.98
PTPN3-205ENST00000447271 GRIN3BO60391 1043 aa8.91□□□□□ -0.98
PTPN3-205ENST00000447271 C3orf67Q6ZVT6 689 aa8.91□□□□□ -0.98
PTPN3-205ENST00000447271 ARXQ96QS3 562 aa8.91□□□□□ -0.98
PTPN3-205ENST00000447271 PRDM10Q9NQV6 1147 aa8.91□□□□□ -0.98
PTPN3-205ENST00000447271 PHF8Q9UPP1 1060 aa8.91□□□□□ -0.98
PTPN3-205ENST00000447271 BOLA1Q9Y3E2 137 aa8.91□□□□□ -0.98
PTPN3-205ENST00000447271 SLIT2O94813 1529 aa8.9□□□□□ -0.98
PTPN3-205ENST00000447271 EFCAB6Q5THR3 1501 aa8.9□□□□□ -0.98
PTPN3-205ENST00000447271 TMEM121BQ9BXQ6 578 aaPredicted RBP8.9□□□□□ -0.98
PTPN3-205ENST00000447271 PLSCR2Q9NRY7 297 aa8.9□□□□□ -0.98
PTPN3-205ENST00000447271 ECM2O94769 699 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-205ENST00000447271 PRPF38BQ5VTL8 546 aaKnown RBP8.89□□□□□ -0.99
PTPN3-205ENST00000447271 BCANQ96GW7 911 aa8.89□□□□□ -0.99
PTPN3-205ENST00000447271 TMEM131LA2VDJ0 1609 aa8.88□□□□□ -0.99
PTPN3-205ENST00000447271 VPS72Q15906 364 aa8.88□□□□□ -0.99
PTPN3-205ENST00000447271 TMEM92Q6UXU6 159 aa8.88□□□□□ -0.99
PTPN3-205ENST00000447271 CFAP44Q96MT7 982 aa8.88□□□□□ -0.99
PTPN3-205ENST00000447271 BCL11BQ9C0K0 894 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-205ENST00000447271 MYOM2P54296 1465 aa8.88□□□□□ -0.99
PTPN3-205ENST00000447271 LOC105371045A0A1W2PR82 267 aa8.87□□□□□ -0.99
PTPN3-205ENST00000447271 FAM98CQ17RN3 349 aaKnown RBP8.87□□□□□ -0.99
PTPN3-205ENST00000447271 PCGF6Q9BYE7 350 aa8.87□□□□□ -0.99
PTPN3-205ENST00000447271 CROCC2H7BZ55 1655 aa8.87□□□□□ -0.99
PTPN3-205ENST00000447271 MST1RQ04912 1400 aa8.87□□□□□ -0.99
PTPN3-205ENST00000447271 YBX3P16989 372 aaKnown RBP eCLIP8.86□□□□□ -0.99
PTPN3-205ENST00000447271 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
PTPN3-205ENST00000447271 EEA1Q15075 1411 aa8.86□□□□□ -0.99
PTPN3-205ENST00000447271 TMEM2Q9UHN6 1383 aa8.86□□□□□ -0.99
PTPN3-205ENST00000447271 FOXN1O15353 648 aa8.85□□□□□ -0.99
PTPN3-205ENST00000447271 MICALL2Q8IY33 904 aa8.85□□□□□ -0.99
PTPN3-205ENST00000447271 MARVELD3Q96A59 401 aa8.85□□□□□ -0.99
PTPN3-205ENST00000447271 ANO8Q9HCE9 1232 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-205ENST00000447271 HOXB3P14651 431 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-205ENST00000447271 MFRPQ9BY79 579 aa8.84□□□□□ -0.99
PTPN3-205ENST00000447271 MTFR1LQ9H019 292 aa8.84□□□□□ -0.99
PTPN3-205ENST00000447271 INO80Q9ULG1 1556 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-205ENST00000447271 DHX57Q6P158 1386 aaKnown RBP8.84□□□□□ -0.99
PTPN3-205ENST00000447271 ERVK-7P63135 1459 aa8.83□□□□□ -1
PTPN3-205ENST00000447271 ABCC5O15440 1437 aa8.83□□□□□ -1
PTPN3-205ENST00000447271 SOX12O15370 315 aa8.83□□□□□ -1
PTPN3-205ENST00000447271 SLC17A8Q8NDX2 589 aa8.83□□□□□ -1
PTPN3-205ENST00000447271 STK24Q9Y6E0 443 aa8.83□□□□□ -1
PTPN3-205ENST00000447271 SOS2Q07890 1332 aaPredicted RBP8.82□□□□□ -1
PTPN3-205ENST00000447271 DCCP43146 1447 aa8.82□□□□□ -1
PTPN3-205ENST00000447271 KIF3BO15066 747 aa8.82□□□□□ -1
PTPN3-205ENST00000447271 FAM196AQ6ZSG2 479 aa8.82□□□□□ -1
PTPN3-205ENST00000447271 RBM46Q8TBY0 533 aaKnown RBP8.82□□□□□ -1
PTPN3-205ENST00000447271 ARHGEF28Q8N1W1 1705 aaKnown RBP8.82□□□□□ -1
PTPN3-205ENST00000447271 PREX2Q70Z35 1606 aa8.81□□□□□ -1
PTPN3-205ENST00000447271 POTEB3A0JP26 581 aa8.81□□□□□ -1
PTPN3-205ENST00000447271 STK25O00506 426 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms