RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ATP1B4Q9UN42 357 aaPredicted RBP5.56□□□□□ -1.52
PMS1-215ENST00000447232 POTEEQ6S8J3 1075 aa5.56□□□□□ -1.52
PMS1-215ENST00000447232 C8orf37Q96NL8 207 aa5.56□□□□□ -1.52
PMS1-215ENST00000447232 BLMP54132 1417 aaPredicted RBP5.56□□□□□ -1.52
PMS1-215ENST00000447232 MBD5Q9P267 1494 aa5.55□□□□□ -1.52
PMS1-215ENST00000447232 NCOA3Q9Y6Q9 1424 aa5.55□□□□□ -1.52
PMS1-215ENST00000447232 TMEM2Q9UHN6 1383 aa5.55□□□□□ -1.52
PMS1-215ENST00000447232 EID1Q9Y6B2 187 aa5.55□□□□□ -1.52
PMS1-215ENST00000447232 MROH1Q8NDA8 1641 aa5.54□□□□□ -1.52
PMS1-215ENST00000447232 ATRNO75882 1429 aa5.54□□□□□ -1.52
PMS1-215ENST00000447232 ANKRD13DQ6ZTN6 518 aa5.54□□□□□ -1.52
PMS1-215ENST00000447232 DEFB132Q7Z7B7 95 aa5.54□□□□□ -1.52
PMS1-215ENST00000447232 CHD2O14647 1828 aaKnown RBP5.53□□□□□ -1.52
PMS1-215ENST00000447232 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.53□□□□□ -1.52
PMS1-215ENST00000447232 SENP3-EIF4A1A0A087X0R7 540 aa5.53□□□□□ -1.52
PMS1-215ENST00000447232 LSM11P83369 360 aaKnown RBP eCLIP5.53□□□□□ -1.52
PMS1-215ENST00000447232 SLC26A8Q96RN1 970 aa5.53□□□□□ -1.52
PMS1-215ENST00000447232 TRPC5Q9UL62 973 aaPredicted RBP5.53□□□□□ -1.52
PMS1-215ENST00000447232 AXIN2Q9Y2T1 843 aa5.53□□□□□ -1.52
PMS1-215ENST00000447232 ARHGAP35Q9NRY4 1499 aa5.53□□□□□ -1.52
PMS1-215ENST00000447232 PNPLA6Q8IY17 1366 aa5.53□□□□□ -1.52
PMS1-215ENST00000447232 BRINP3Q76B58 766 aa5.53□□□□□ -1.52
PMS1-215ENST00000447232 CCDC18Q5T9S5 1454 aa5.53□□□□□ -1.52
PMS1-215ENST00000447232 PIK3C2BO00750 1634 aa5.52□□□□□ -1.53
PMS1-215ENST00000447232 TBC1D12O60347 775 aa5.52□□□□□ -1.53
PMS1-215ENST00000447232 PDE4AP27815 886 aa5.52□□□□□ -1.53
PMS1-215ENST00000447232 PBX2P40425 430 aa5.52□□□□□ -1.53
PMS1-215ENST00000447232 OXER1Q8TDS5 423 aa5.52□□□□□ -1.53
PMS1-215ENST00000447232 UNC13BO14795 1591 aa5.52□□□□□ -1.53
PMS1-215ENST00000447232 ASXL1Q8IXJ9 1541 aa5.52□□□□□ -1.53
PMS1-215ENST00000447232 PSDA5PKW4 1024 aaPredicted RBP5.52□□□□□ -1.53
PMS1-215ENST00000447232 CADPS2Q86UW7 1296 aa5.52□□□□□ -1.53
PMS1-215ENST00000447232 FNBP4Q8N3X1 1017 aaPredicted RBP5.52□□□□□ -1.53
PMS1-215ENST00000447232 PPP1R15BQ5SWA1 713 aa5.51□□□□□ -1.53
PMS1-215ENST00000447232 CFDP1Q9UEE9 299 aaPredicted RBP5.51□□□□□ -1.53
PMS1-215ENST00000447232 USP21Q9UK80 565 aa5.51□□□□□ -1.53
PMS1-215ENST00000447232 CFAP65Q6ZU64 1925 aaKnown RBP5.51□□□□□ -1.53
PMS1-215ENST00000447232 SPHKAPQ2M3C7 1700 aa5.51□□□□□ -1.53
PMS1-215ENST00000447232 RNF166Q96A37 237 aaPredicted RBP5.51□□□□□ -1.53
PMS1-215ENST00000447232 LRRC59Q96AG4 307 aaKnown RBP5.51□□□□□ -1.53
PMS1-215ENST00000447232 EFCAB6Q5THR3 1501 aa5.5□□□□□ -1.53
PMS1-215ENST00000447232 C19orf44Q9H6X5 657 aa5.5□□□□□ -1.53
PMS1-215ENST00000447232 ARHGAP31Q2M1Z3 1444 aa5.5□□□□□ -1.53
PMS1-215ENST00000447232 LARP6Q9BRS8 491 aaKnown RBP5.5□□□□□ -1.53
PMS1-215ENST00000447232 ZNF644Q9H582 1327 aaPredicted RBP5.49□□□□□ -1.53
PMS1-215ENST00000447232 CASKIN1Q8WXD9 1431 aa5.49□□□□□ -1.53
PMS1-215ENST00000447232 CEP152O94986 1710 aa5.49□□□□□ -1.53
PMS1-215ENST00000447232 ARHGAP33O14559 1287 aa5.49□□□□□ -1.53
PMS1-215ENST00000447232 PTGER2P43116 358 aa5.49□□□□□ -1.53
PMS1-215ENST00000447232 C1QTNF8P60827 252 aa5.49□□□□□ -1.53
PMS1-215ENST00000447232 ZNF784Q8NCA9 323 aaPredicted RBP5.49□□□□□ -1.53
PMS1-215ENST00000447232 CEP350Q5VT06 3117 aa5.49□□□□□ -1.53
PMS1-215ENST00000447232 ADAMTS2O95450 1211 aa5.49□□□□□ -1.53
PMS1-215ENST00000447232 DCCP43146 1447 aa5.48□□□□□ -1.53
PMS1-215ENST00000447232 PTCH1Q13635 1447 aa5.48□□□□□ -1.53
PMS1-215ENST00000447232 BRWD3Q6RI45 1802 aa5.48□□□□□ -1.53
PMS1-215ENST00000447232 ATF3P18847 181 aa5.48□□□□□ -1.53
PMS1-215ENST00000447232 CCDC141Q6ZP82 1450 aa5.48□□□□□ -1.53
PMS1-215ENST00000447232 EIF2AK4Q9P2K8 1649 aaKnown RBP5.48□□□□□ -1.53
PMS1-215ENST00000447232 CCNB3Q8WWL7 1395 aa5.48□□□□□ -1.53
PMS1-215ENST00000447232 DDX27Q96GQ7 796 aaKnown RBP5.48□□□□□ -1.53
PMS1-215ENST00000447232 PSEN2P49810 448 aa5.47□□□□□ -1.53
PMS1-215ENST00000447232 MST1RQ04912 1400 aa5.47□□□□□ -1.53
PMS1-215ENST00000447232 SF3B2Q13435 895 aaKnown RBP5.47□□□□□ -1.53
PMS1-215ENST00000447232 MFSD10Q14728 455 aa5.47□□□□□ -1.53
PMS1-215ENST00000447232 EEA1Q15075 1411 aa5.47□□□□□ -1.53
PMS1-215ENST00000447232 LAMC1P11047 1609 aa5.47□□□□□ -1.53
PMS1-215ENST00000447232 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.47□□□□□ -1.53
PMS1-215ENST00000447232 GLI3P10071 1580 aa5.47□□□□□ -1.53
PMS1-215ENST00000447232 PPP4R3BQ5MIZ7 849 aa5.47□□□□□ -1.53
PMS1-215ENST00000447232 GJD4Q96KN9 370 aaPredicted RBP5.47□□□□□ -1.53
PMS1-215ENST00000447232 DMRTA1Q5VZB9 504 aa5.46□□□□□ -1.54
PMS1-215ENST00000447232 ANO8Q9HCE9 1232 aaPredicted RBP5.46□□□□□ -1.54
PMS1-215ENST00000447232 PLEKHG1Q9ULL1 1385 aa5.46□□□□□ -1.54
PMS1-215ENST00000447232 COL22A1Q8NFW1 1626 aaPredicted RBP5.46□□□□□ -1.54
PMS1-215ENST00000447232 ADGRD1Q6QNK2 874 aa5.46□□□□□ -1.54
PMS1-215ENST00000447232 C14orf37Q86TY3 774 aa5.46□□□□□ -1.54
PMS1-215ENST00000447232 ADGRB3O60242 1522 aa5.46□□□□□ -1.54
PMS1-215ENST00000447232 ZFYVE9O95405 1425 aa5.45□□□□□ -1.54
PMS1-215ENST00000447232 IDI1Q13907 227 aa5.45□□□□□ -1.54
PMS1-215ENST00000447232 R3HDM1Q15032 1099 aaKnown RBP5.45□□□□□ -1.54
PMS1-215ENST00000447232 BBXQ8WY36 941 aaPredicted RBP5.45□□□□□ -1.54
PMS1-215ENST00000447232 MARF1Q9Y4F3 1742 aaKnown RBP5.45□□□□□ -1.54
PMS1-215ENST00000447232 RALGAPBQ86X10 1494 aa5.45□□□□□ -1.54
PMS1-215ENST00000447232 DDX17Q92841 729 aaKnown RBP5.45□□□□□ -1.54
PMS1-215ENST00000447232 EMILIN3Q9NT22 766 aa5.45□□□□□ -1.54
PMS1-215ENST00000447232 TBX22Q9Y458 520 aa5.45□□□□□ -1.54
PMS1-215ENST00000447232 CAMTA1Q9Y6Y1 1673 aa5.44□□□□□ -1.54
PMS1-215ENST00000447232 BAG6P46379 1132 aa5.44□□□□□ -1.54
PMS1-215ENST00000447232 RTN4Q9NQC3 1192 aaKnown RBP5.44□□□□□ -1.54
PMS1-215ENST00000447232 NINLQ9Y2I6 1382 aa5.44□□□□□ -1.54
PMS1-215ENST00000447232 MYOM2P54296 1465 aa5.44□□□□□ -1.54
PMS1-215ENST00000447232 FYCO1Q9BQS8 1478 aa5.44□□□□□ -1.54
PMS1-215ENST00000447232 TK2O00142 265 aa5.44□□□□□ -1.54
PMS1-215ENST00000447232 HRO43593 1189 aa5.44□□□□□ -1.54
PMS1-215ENST00000447232 EVI5O60447 810 aa5.44□□□□□ -1.54
PMS1-215ENST00000447232 AMER1Q5JTC6 1135 aaPredicted RBP5.44□□□□□ -1.54
PMS1-215ENST00000447232 RSPH4AQ5TD94 716 aa5.44□□□□□ -1.54
PMS1-215ENST00000447232 ZNF454Q8N9F8 522 aa5.44□□□□□ -1.54
PMS1-215ENST00000447232 MTUS2Q5JR59 1369 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms