RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
COL6A4P1-201ENST00000446690 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
COL6A4P1-201ENST00000446690 POLKQ9UBT6 870 aa12.45□□□□□ -0.42
COL6A4P1-201ENST00000446690 CPSF1Q10570 1443 aaKnown RBP12.45□□□□□ -0.42
COL6A4P1-201ENST00000446690 MED14O60244 1454 aa12.45□□□□□ -0.42
COL6A4P1-201ENST00000446690 SLIT1O75093 1534 aa12.44□□□□□ -0.42
COL6A4P1-201ENST00000446690 ARHGAP23Q9P227 1491 aa12.44□□□□□ -0.42
COL6A4P1-201ENST00000446690 COG3Q96JB2 828 aa12.44□□□□□ -0.42
COL6A4P1-201ENST00000446690 EDC4Q6P2E9 1401 aaKnown RBP12.44□□□□□ -0.42
COL6A4P1-201ENST00000446690 C20orf194Q5TEA3 1177 aa12.44□□□□□ -0.42
COL6A4P1-201ENST00000446690 CRBNQ96SW2 442 aa12.44□□□□□ -0.42
COL6A4P1-201ENST00000446690 ACEP12821 1306 aa12.43□□□□□ -0.42
COL6A4P1-201ENST00000446690 KNDC1Q76NI1 1749 aa12.43□□□□□ -0.42
COL6A4P1-201ENST00000446690 MAPK8IP3Q9UPT6 1336 aa12.43□□□□□ -0.42
COL6A4P1-201ENST00000446690 PMFBP1Q8TBY8 1022 aa12.43□□□□□ -0.42
COL6A4P1-201ENST00000446690 EMILIN1Q9Y6C2 1016 aa12.43□□□□□ -0.42
COL6A4P1-201ENST00000446690 ANKLE2Q86XL3 938 aa12.42□□□□□ -0.42
COL6A4P1-201ENST00000446690 NKTRP30414 1462 aaKnown RBP12.42□□□□□ -0.42
COL6A4P1-201ENST00000446690 BCAR3O75815 825 aa12.42□□□□□ -0.42
COL6A4P1-201ENST00000446690 KCNA6P17658 529 aa12.42□□□□□ -0.42
COL6A4P1-201ENST00000446690 RRS1Q15050 365 aaKnown RBP12.42□□□□□ -0.42
COL6A4P1-201ENST00000446690 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.42□□□□□ -0.42
COL6A4P1-201ENST00000446690 WDR63Q8IWG1 891 aa12.41□□□□□ -0.42
COL6A4P1-201ENST00000446690 PLEKHF1Q96S99 279 aa12.41□□□□□ -0.42
COL6A4P1-201ENST00000446690 RBM19Q9Y4C8 960 aaKnown RBP12.4□□□□□ -0.42
COL6A4P1-201ENST00000446690 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.4□□□□□ -0.42
COL6A4P1-201ENST00000446690 RIMS1Q86UR5 1692 aaKnown RBP12.4□□□□□ -0.42
COL6A4P1-201ENST00000446690 TMPOP42166 694 aaKnown RBP12.4□□□□□ -0.42
COL6A4P1-201ENST00000446690 PNPLA6Q8IY17 1366 aa12.4□□□□□ -0.42
COL6A4P1-201ENST00000446690 PLEKHG3A1L390 1219 aa12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 SOX12O15370 315 aa12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 HMOX1P09601 288 aa12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 CCDC27Q2M243 656 aa12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 NGDNQ8NEJ9 315 aaKnown RBP12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 PNNQ9H307 717 aaKnown RBP12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 COL3A1P02461 1466 aaPredicted RBP12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 IQSEC2Q5JU85 1478 aa12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 TTC21BQ7Z4L5 1316 aa12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 CDC42BPGQ6DT37 1551 aa12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 RIPK4P57078 832 aa12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 PHF23Q9BUL5 403 aaPredicted RBP12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 KIF20BQ96Q89 1820 aa12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 CEP170BQ9Y4F5 1589 aaPredicted RBP12.39□□□□□ -0.43
COL6A4P1-201ENST00000446690 ANKRD26Q9UPS8 1709 aa12.38□□□□□ -0.43
COL6A4P1-201ENST00000446690 NEFMP07197 916 aa12.38□□□□□ -0.43
COL6A4P1-201ENST00000446690 PRKAR2BP31323 418 aa12.38□□□□□ -0.43
COL6A4P1-201ENST00000446690 FCHSD2O94868 740 aa12.37□□□□□ -0.43
COL6A4P1-201ENST00000446690 CANXP27824 592 aaKnown RBP12.37□□□□□ -0.43
COL6A4P1-201ENST00000446690 MYH16Q9H6N6 1097 aa12.37□□□□□ -0.43
COL6A4P1-201ENST00000446690 FRAT1Q92837 279 aaPredicted RBP12.36□□□□□ -0.43
COL6A4P1-201ENST00000446690 TRIM35Q9UPQ4 493 aa12.36□□□□□ -0.43
COL6A4P1-201ENST00000446690 PTCH1Q13635 1447 aa12.36□□□□□ -0.43
COL6A4P1-201ENST00000446690 IL13P35225 146 aa12.36□□□□□ -0.43
COL6A4P1-201ENST00000446690 TSR2Q969E8 191 aaKnown RBP12.36□□□□□ -0.43
COL6A4P1-201ENST00000446690 RSPH6AQ9H0K4 717 aa12.35□□□□□ -0.43
COL6A4P1-201ENST00000446690 AATKQ6ZMQ8 1374 aa12.35□□□□□ -0.43
COL6A4P1-201ENST00000446690 ADGRB2O60241 1585 aa12.35□□□□□ -0.43
COL6A4P1-201ENST00000446690 BCL2L13Q9BXK5 485 aa12.34□□□□□ -0.43
COL6A4P1-201ENST00000446690 USP6P35125 1406 aa12.34□□□□□ -0.43
COL6A4P1-201ENST00000446690 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
COL6A4P1-201ENST00000446690 PHACTR3Q96KR7 559 aa12.34□□□□□ -0.43
COL6A4P1-201ENST00000446690 DIP2AQ14689 1571 aa12.34□□□□□ -0.43
COL6A4P1-201ENST00000446690 RARSP54136 660 aaKnown RBP12.33□□□□□ -0.44
COL6A4P1-201ENST00000446690 LAS1LQ9Y4W2 734 aaKnown RBP12.33□□□□□ -0.44
COL6A4P1-201ENST00000446690 C14orf37Q86TY3 774 aa12.32□□□□□ -0.44
COL6A4P1-201ENST00000446690 ITSN1Q15811 1721 aa12.32□□□□□ -0.44
COL6A4P1-201ENST00000446690 PIK3R4Q99570 1358 aa12.32□□□□□ -0.44
COL6A4P1-201ENST00000446690 MON2Q7Z3U7 1717 aa12.32□□□□□ -0.44
COL6A4P1-201ENST00000446690 PAK3O75914 559 aaPredicted RBP12.32□□□□□ -0.44
COL6A4P1-201ENST00000446690 NUTM2GQ5VZR2 741 aa12.32□□□□□ -0.44
COL6A4P1-201ENST00000446690 FANCIQ9NVI1 1328 aa12.32□□□□□ -0.44
COL6A4P1-201ENST00000446690 EXOSC9Q06265 439 aaKnown RBP12.31□□□□□ -0.44
COL6A4P1-201ENST00000446690 MAP2P11137 1827 aaKnown RBP12.31□□□□□ -0.44
COL6A4P1-201ENST00000446690 ADAMTSL3P82987 1691 aa12.31□□□□□ -0.44
COL6A4P1-201ENST00000446690 AKAP12Q02952 1782 aa12.31□□□□□ -0.44
COL6A4P1-201ENST00000446690 HSP90AB2PQ58FF8 381 aa12.31□□□□□ -0.44
COL6A4P1-201ENST00000446690 PANK1Q8TE04 598 aa12.31□□□□□ -0.44
COL6A4P1-201ENST00000446690 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
COL6A4P1-201ENST00000446690 TTC21AQ8NDW8 1320 aa12.3□□□□□ -0.44
COL6A4P1-201ENST00000446690 EIF4A2Q14240 407 aaKnown RBP12.3□□□□□ -0.44
COL6A4P1-201ENST00000446690 NFE2L2Q16236 605 aa12.3□□□□□ -0.44
COL6A4P1-201ENST00000446690 NLRP6P59044 892 aa12.29□□□□□ -0.44
COL6A4P1-201ENST00000446690 THUMPD2Q9BTF0 503 aaKnown RBP12.29□□□□□ -0.44
COL6A4P1-201ENST00000446690 COG6Q9Y2V7 657 aa12.29□□□□□ -0.44
COL6A4P1-201ENST00000446690 SULT6B1Q6IMI4 303 aa12.29□□□□□ -0.44
COL6A4P1-201ENST00000446690 LRRC7Q96NW7 1537 aa12.29□□□□□ -0.44
COL6A4P1-201ENST00000446690 PDE3AQ14432 1141 aa12.28□□□□□ -0.44
COL6A4P1-201ENST00000446690 ABTB2Q8N961 1025 aa12.28□□□□□ -0.44
COL6A4P1-201ENST00000446690 XRN1Q8IZH2 1706 aaKnown RBP12.28□□□□□ -0.44
COL6A4P1-201ENST00000446690 OVOS2A0A0J9YW53 1432 aa12.28□□□□□ -0.44
COL6A4P1-201ENST00000446690 OVOS2Q6IE36 1432 aa12.28□□□□□ -0.44
COL6A4P1-201ENST00000446690 TOPAZ1Q8N9V7 1692 aa12.28□□□□□ -0.44
COL6A4P1-201ENST00000446690 SKAP1Q86WV1 359 aa12.28□□□□□ -0.44
COL6A4P1-201ENST00000446690 AEBP1Q8IUX7 1158 aa12.28□□□□□ -0.44
COL6A4P1-201ENST00000446690 CLUAP1Q96AJ1 413 aa12.28□□□□□ -0.44
COL6A4P1-201ENST00000446690 SSH2Q76I76 1423 aa12.28□□□□□ -0.44
COL6A4P1-201ENST00000446690 IL16Q14005 1332 aa12.27□□□□□ -0.44
COL6A4P1-201ENST00000446690 AMPHP49418 695 aa12.27□□□□□ -0.44
COL6A4P1-201ENST00000446690 ESCO1Q5FWF5 840 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms