RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.08□□□□□ -0.64
HDAC9-216ENST00000446646 MARF1Q9Y4F3 1742 aaKnown RBP11.07□□□□□ -0.64
HDAC9-216ENST00000446646 VPS72Q15906 364 aa11.07□□□□□ -0.64
HDAC9-216ENST00000446646 EZH2Q15910 746 aaKnown RBP11.07□□□□□ -0.64
HDAC9-216ENST00000446646 ESCO1Q5FWF5 840 aa11.07□□□□□ -0.64
HDAC9-216ENST00000446646 DCAF8Q5TAQ9 597 aa11.07□□□□□ -0.64
HDAC9-216ENST00000446646 CABLES1Q8TDN4 633 aa11.07□□□□□ -0.64
HDAC9-216ENST00000446646 ANKRD50Q9ULJ7 1429 aa11.07□□□□□ -0.64
HDAC9-216ENST00000446646 SPHKAPQ2M3C7 1700 aa11.06□□□□□ -0.64
HDAC9-216ENST00000446646 E9PCH4 1651 aa11.06□□□□□ -0.64
HDAC9-216ENST00000446646 SENP3-EIF4A1A0A087X0R7 540 aa11.06□□□□□ -0.64
HDAC9-216ENST00000446646 MAP3K13O43283 966 aa11.06□□□□□ -0.64
HDAC9-216ENST00000446646 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
HDAC9-216ENST00000446646 CCDC9Q9Y3X0 531 aaKnown RBP11.05□□□□□ -0.64
HDAC9-216ENST00000446646 NPHP3Q7Z494 1330 aa11.05□□□□□ -0.64
HDAC9-216ENST00000446646 FAM98CQ17RN3 349 aaKnown RBP11.04□□□□□ -0.64
HDAC9-216ENST00000446646 IFNLR1Q8IU57 520 aaPredicted RBP11.04□□□□□ -0.64
HDAC9-216ENST00000446646 ZNF784Q8NCA9 323 aaPredicted RBP11.04□□□□□ -0.64
HDAC9-216ENST00000446646 ADGRL2O95490 1459 aa11.04□□□□□ -0.64
HDAC9-216ENST00000446646 A0A0G2JS52 829 aa11.03□□□□□ -0.64
HDAC9-216ENST00000446646 MYT1Q01538 1121 aa11.03□□□□□ -0.64
HDAC9-216ENST00000446646 CAMKK2Q96RR4 588 aa11.03□□□□□ -0.64
HDAC9-216ENST00000446646 VPS8Q8N3P4 1428 aa11.02□□□□□ -0.64
HDAC9-216ENST00000446646 CAMTA1Q9Y6Y1 1673 aa11.02□□□□□ -0.64
HDAC9-216ENST00000446646 ZNF326Q5BKZ1 582 aaKnown RBP11.02□□□□□ -0.65
HDAC9-216ENST00000446646 FAM83GA6ND36 823 aa11.01□□□□□ -0.65
HDAC9-216ENST00000446646 SPATA31A3Q5VYP0 1347 aa11.01□□□□□ -0.65
HDAC9-216ENST00000446646 USP32Q8NFA0 1604 aa11.01□□□□□ -0.65
HDAC9-216ENST00000446646 DISP2A7MBM2 1401 aa11.01□□□□□ -0.65
HDAC9-216ENST00000446646 PCDHB13Q9Y5F0 798 aa11□□□□□ -0.65
HDAC9-216ENST00000446646 NEXMIFQ5QGS0 1516 aa10.99□□□□□ -0.65
HDAC9-216ENST00000446646 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
HDAC9-216ENST00000446646 TNS1Q9HBL0 1735 aaKnown RBP10.98□□□□□ -0.65
HDAC9-216ENST00000446646 TRIM37O94972 964 aa10.98□□□□□ -0.65
HDAC9-216ENST00000446646 PYGBP11216 843 aa10.98□□□□□ -0.65
HDAC9-216ENST00000446646 C1QTNF8P60827 252 aa10.98□□□□□ -0.65
HDAC9-216ENST00000446646 IQGAP3Q86VI3 1631 aa10.98□□□□□ -0.65
HDAC9-216ENST00000446646 GSE1Q14687 1217 aa10.97□□□□□ -0.65
HDAC9-216ENST00000446646 TRPC6Q9Y210 931 aa10.97□□□□□ -0.65
HDAC9-216ENST00000446646 PLCH1Q4KWH8 1693 aa10.97□□□□□ -0.65
HDAC9-216ENST00000446646 ATMINO43313 823 aaPredicted RBP10.96□□□□□ -0.65
HDAC9-216ENST00000446646 LHX8Q68G74 356 aa10.96□□□□□ -0.65
HDAC9-216ENST00000446646 ASTLQ6HA08 431 aaPredicted RBP10.96□□□□□ -0.65
HDAC9-216ENST00000446646 KRT28Q7Z3Y7 464 aa10.96□□□□□ -0.65
HDAC9-216ENST00000446646 WAPLQ7Z5K2 1190 aa10.96□□□□□ -0.65
HDAC9-216ENST00000446646 RGPD1P0DJD0 1748 aa10.95□□□□□ -0.66
HDAC9-216ENST00000446646 NAIPQ13075 1403 aa10.95□□□□□ -0.66
HDAC9-216ENST00000446646 PRAG1Q86YV5 1406 aa10.95□□□□□ -0.66
HDAC9-216ENST00000446646 NUP155O75694 1391 aa10.95□□□□□ -0.66
HDAC9-216ENST00000446646 PLEKHH1Q9ULM0 1364 aa10.95□□□□□ -0.66
HDAC9-216ENST00000446646 FAM50AQ14320 339 aaKnown RBP10.95□□□□□ -0.66
HDAC9-216ENST00000446646 SGIP1Q9BQI5 828 aa10.95□□□□□ -0.66
HDAC9-216ENST00000446646 PDGFDQ9GZP0 370 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-216ENST00000446646 PPP1R1BQ9UD71 204 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-216ENST00000446646 CDC42BPGQ6DT37 1551 aa10.94□□□□□ -0.66
HDAC9-216ENST00000446646 HFM1A2PYH4 1435 aa10.94□□□□□ -0.66
HDAC9-216ENST00000446646 APBA3O96018 575 aa10.94□□□□□ -0.66
HDAC9-216ENST00000446646 HAP1P54257 671 aaPredicted RBP10.94□□□□□ -0.66
HDAC9-216ENST00000446646 PELP1Q8IZL8 1130 aaKnown RBP10.94□□□□□ -0.66
HDAC9-216ENST00000446646 BTG4Q9NY30 223 aa10.94□□□□□ -0.66
HDAC9-216ENST00000446646 NINLQ9Y2I6 1382 aa10.93□□□□□ -0.66
HDAC9-216ENST00000446646 KCNQ2O43526 872 aa10.93□□□□□ -0.66
HDAC9-216ENST00000446646 IFNL1Q8IU54 200 aa10.93□□□□□ -0.66
HDAC9-216ENST00000446646 SPON1Q9HCB6 807 aa10.93□□□□□ -0.66
HDAC9-216ENST00000446646 TNS3Q68CZ2 1445 aa10.92□□□□□ -0.66
HDAC9-216ENST00000446646 NRAPQ86VF7 1730 aa10.92□□□□□ -0.66
HDAC9-216ENST00000446646 LRPPRCP42704 1394 aaKnown RBP10.92□□□□□ -0.66
HDAC9-216ENST00000446646 CLTCL1P53675 1640 aa10.92□□□□□ -0.66
HDAC9-216ENST00000446646 SPATA31A5Q5VU36 1347 aa10.92□□□□□ -0.66
HDAC9-216ENST00000446646 SPATA31A7Q8IWB4 1347 aa10.92□□□□□ -0.66
HDAC9-216ENST00000446646 TIE1P35590 1138 aa10.92□□□□□ -0.66
HDAC9-216ENST00000446646 LMOD2Q6P5Q4 547 aa10.92□□□□□ -0.66
HDAC9-216ENST00000446646 BMP2KQ9NSY1 1161 aaPredicted RBP10.92□□□□□ -0.66
HDAC9-216ENST00000446646 CIZ1Q9ULV3 898 aaPredicted RBP10.92□□□□□ -0.66
HDAC9-216ENST00000446646 NWD2Q9ULI1 1742 aa10.92□□□□□ -0.66
HDAC9-216ENST00000446646 LOC105371045A0A1W2PR82 267 aa10.91□□□□□ -0.66
HDAC9-216ENST00000446646 ATN1P54259 1190 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-216ENST00000446646 STK26Q9P289 416 aa10.91□□□□□ -0.66
HDAC9-216ENST00000446646 NUP188Q5SRE5 1749 aa10.91□□□□□ -0.66
HDAC9-216ENST00000446646 THSD7AQ9UPZ6 1657 aa10.91□□□□□ -0.66
HDAC9-216ENST00000446646 CCDC144AA2RUR9 1427 aa10.91□□□□□ -0.66
HDAC9-216ENST00000446646 ABCA3Q99758 1704 aa10.9□□□□□ -0.66
HDAC9-216ENST00000446646 RREB1Q92766 1687 aa10.89□□□□□ -0.67
HDAC9-216ENST00000446646 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
HDAC9-216ENST00000446646 METRNQ9UJH8 293 aa10.88□□□□□ -0.67
HDAC9-216ENST00000446646 NRKQ7Z2Y5 1582 aa10.87□□□□□ -0.67
HDAC9-216ENST00000446646 TTLL13PA6NNM8 815 aa10.87□□□□□ -0.67
HDAC9-216ENST00000446646 FAM196AQ6ZSG2 479 aa10.87□□□□□ -0.67
HDAC9-216ENST00000446646 SLC39A7Q92504 469 aa10.87□□□□□ -0.67
HDAC9-216ENST00000446646 PARD3Q8TEW0 1356 aa10.87□□□□□ -0.67
HDAC9-216ENST00000446646 ADGRB2O60241 1585 aa10.86□□□□□ -0.67
HDAC9-216ENST00000446646 ZBTB7AO95365 584 aa10.86□□□□□ -0.67
HDAC9-216ENST00000446646 PTGER2P43116 358 aa10.86□□□□□ -0.67
HDAC9-216ENST00000446646 TMEM132EQ6IEE7 984 aa10.86□□□□□ -0.67
HDAC9-216ENST00000446646 PCDHB8Q9UN66 801 aa10.86□□□□□ -0.67
HDAC9-216ENST00000446646 PHF8Q9UPP1 1060 aa10.86□□□□□ -0.67
HDAC9-216ENST00000446646 C7P10643 843 aa10.85□□□□□ -0.67
HDAC9-216ENST00000446646 NBPF8Q3BBV2 869 aa10.85□□□□□ -0.67
HDAC9-216ENST00000446646 NBPF14Q5TI25 921 aa10.85□□□□□ -0.67
HDAC9-216ENST00000446646 SBNO1A3KN83 1393 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms