RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 CAPN5O15484 640 aaPredicted RBP9.57□□□□□ -0.88
LINC00440-201ENST00000446579 NFX1Q12986 1120 aaKnown RBP9.57□□□□□ -0.88
LINC00440-201ENST00000446579 KDM4CQ9H3R0 1056 aa9.57□□□□□ -0.88
LINC00440-201ENST00000446579 GPBP1L1Q9HC44 474 aaPredicted RBP9.56□□□□□ -0.88
LINC00440-201ENST00000446579 TLL2Q9Y6L7 1015 aa9.56□□□□□ -0.88
LINC00440-201ENST00000446579 BMP1P13497 986 aa9.55□□□□□ -0.88
LINC00440-201ENST00000446579 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
LINC00440-201ENST00000446579 TERTO14746 1132 aaKnown RBP9.54□□□□□ -0.88
LINC00440-201ENST00000446579 CSPP1Q1MSJ5 1256 aa9.54□□□□□ -0.88
LINC00440-201ENST00000446579 DESI1Q6ICB0 168 aa9.54□□□□□ -0.88
LINC00440-201ENST00000446579 ZNF511Q8NB15 262 aa9.54□□□□□ -0.88
LINC00440-201ENST00000446579 DDRGK1Q96HY6 314 aa9.54□□□□□ -0.88
LINC00440-201ENST00000446579 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
LINC00440-201ENST00000446579 PCDHB15Q9Y5E8 787 aa9.54□□□□□ -0.88
LINC00440-201ENST00000446579 SPTLC1O15269 473 aa9.53□□□□□ -0.88
LINC00440-201ENST00000446579 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
LINC00440-201ENST00000446579 PLEKHG3A1L390 1219 aa9.52□□□□□ -0.89
LINC00440-201ENST00000446579 VARSP26640 1264 aaKnown RBP9.52□□□□□ -0.89
LINC00440-201ENST00000446579 RIC3Q7Z5B4 369 aa9.52□□□□□ -0.89
LINC00440-201ENST00000446579 TSC1Q92574 1164 aa9.52□□□□□ -0.89
LINC00440-201ENST00000446579 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
LINC00440-201ENST00000446579 CFAP99D6REC4 459 aa9.51□□□□□ -0.89
LINC00440-201ENST00000446579 HRCP23327 699 aa9.51□□□□□ -0.89
LINC00440-201ENST00000446579 MYSM1Q5VVJ2 828 aa9.51□□□□□ -0.89
LINC00440-201ENST00000446579 LYPD8Q6UX82 237 aa9.5□□□□□ -0.89
LINC00440-201ENST00000446579 TRIM46Q7Z4K8 759 aa9.5□□□□□ -0.89
LINC00440-201ENST00000446579 FAM117AQ9C073 453 aa9.5□□□□□ -0.89
LINC00440-201ENST00000446579 NNTQ13423 1086 aa9.49□□□□□ -0.89
LINC00440-201ENST00000446579 ARID5BQ14865 1188 aa9.49□□□□□ -0.89
LINC00440-201ENST00000446579 AGERQ15109 404 aa9.49□□□□□ -0.89
LINC00440-201ENST00000446579 TUSC1Q2TAM9 212 aa9.49□□□□□ -0.89
LINC00440-201ENST00000446579 CABLES1Q8TDN4 633 aa9.49□□□□□ -0.89
LINC00440-201ENST00000446579 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
LINC00440-201ENST00000446579 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
LINC00440-201ENST00000446579 INSM1Q01101 510 aaPredicted RBP9.48□□□□□ -0.89
LINC00440-201ENST00000446579 NUTM2DQ5VT03 806 aaPredicted RBP9.48□□□□□ -0.89
LINC00440-201ENST00000446579 PRPF38BQ5VTL8 546 aaKnown RBP9.48□□□□□ -0.89
LINC00440-201ENST00000446579 NUTM2AQ8IVF1 878 aaPredicted RBP9.48□□□□□ -0.89
LINC00440-201ENST00000446579 FAM174AQ8TBP5 190 aa9.48□□□□□ -0.89
LINC00440-201ENST00000446579 SLC16A10Q8TF71 515 aa9.48□□□□□ -0.89
LINC00440-201ENST00000446579 MAP10Q9P2G4 905 aa9.48□□□□□ -0.89
LINC00440-201ENST00000446579 C14orf37Q86TY3 774 aa9.47□□□□□ -0.89
LINC00440-201ENST00000446579 WIPF1O43516 503 aa9.46□□□□□ -0.9
LINC00440-201ENST00000446579 CLK2P49760 499 aaKnown RBP9.46□□□□□ -0.9
LINC00440-201ENST00000446579 WDR4P57081 412 aaKnown RBP9.46□□□□□ -0.9
LINC00440-201ENST00000446579 FOXJ1Q92949 421 aa9.46□□□□□ -0.9
LINC00440-201ENST00000446579 ZFP42Q96MM3 310 aa9.46□□□□□ -0.9
LINC00440-201ENST00000446579 NXF1Q9UBU9 619 aaKnown RBP9.46□□□□□ -0.9
LINC00440-201ENST00000446579 SKIV2LQ15477 1246 aaKnown RBP9.45□□□□□ -0.9
LINC00440-201ENST00000446579 SH3D19Q5HYK7 790 aa9.45□□□□□ -0.9
LINC00440-201ENST00000446579 LIMD1Q9UGP4 676 aa9.45□□□□□ -0.9
LINC00440-201ENST00000446579 VEGFBP49765 207 aa9.44□□□□□ -0.9
LINC00440-201ENST00000446579 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
LINC00440-201ENST00000446579 POLR3EQ9NVU0 708 aa9.44□□□□□ -0.9
LINC00440-201ENST00000446579 STK17AQ9UEE5 414 aa9.44□□□□□ -0.9
LINC00440-201ENST00000446579 PER1O15534 1290 aaPredicted RBP9.43□□□□□ -0.9
LINC00440-201ENST00000446579 ADH1CP00326 375 aa9.43□□□□□ -0.9
LINC00440-201ENST00000446579 F12P00748 615 aaPredicted RBP9.43□□□□□ -0.9
LINC00440-201ENST00000446579 SCARF1Q14162 830 aa9.43□□□□□ -0.9
LINC00440-201ENST00000446579 MPNDQ8N594 471 aa9.43□□□□□ -0.9
LINC00440-201ENST00000446579 ARXQ96QS3 562 aa9.43□□□□□ -0.9
LINC00440-201ENST00000446579 QPCTQ16769 361 aa9.42□□□□□ -0.9
LINC00440-201ENST00000446579 MRPL14Q6P1L8 145 aaKnown RBP9.42□□□□□ -0.9
LINC00440-201ENST00000446579 PURBQ96QR8 312 aaKnown RBP9.42□□□□□ -0.9
LINC00440-201ENST00000446579 LILRB3O75022 631 aa9.41□□□□□ -0.9
LINC00440-201ENST00000446579 TIMP2P16035 220 aa9.41□□□□□ -0.9
LINC00440-201ENST00000446579 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
LINC00440-201ENST00000446579 IL27Q8NEV9 243 aa9.4□□□□□ -0.9
LINC00440-201ENST00000446579 HELBQ8NG08 1087 aaPredicted RBP9.39□□□□□ -0.91
LINC00440-201ENST00000446579 IRF7Q92985 503 aa9.39□□□□□ -0.91
LINC00440-201ENST00000446579 GOPCQ9HD26 462 aa9.39□□□□□ -0.91
LINC00440-201ENST00000446579 ATP1B4Q9UN42 357 aaPredicted RBP9.39□□□□□ -0.91
LINC00440-201ENST00000446579 ZIC2O95409 532 aaPredicted RBP9.38□□□□□ -0.91
LINC00440-201ENST00000446579 ARMC2Q8NEN0 867 aa9.38□□□□□ -0.91
LINC00440-201ENST00000446579 CDK15Q96Q40 435 aa9.38□□□□□ -0.91
LINC00440-201ENST00000446579 ZFAND3Q9H8U3 227 aa9.38□□□□□ -0.91
LINC00440-201ENST00000446579 SOBPA7XYQ1 873 aa9.37□□□□□ -0.91
LINC00440-201ENST00000446579 GMPRP36959 345 aa9.37□□□□□ -0.91
LINC00440-201ENST00000446579 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
LINC00440-201ENST00000446579 C6orf118Q5T5N4 469 aa9.37□□□□□ -0.91
LINC00440-201ENST00000446579 NR5A1Q13285 461 aa9.36□□□□□ -0.91
LINC00440-201ENST00000446579 RTL5Q5HYW3 569 aaPredicted RBP9.36□□□□□ -0.91
LINC00440-201ENST00000446579 NPAS3Q8IXF0 933 aa9.36□□□□□ -0.91
LINC00440-201ENST00000446579 PROCA1Q8NCQ7 364 aaPredicted RBP9.36□□□□□ -0.91
LINC00440-201ENST00000446579 ITPKCQ96DU7 683 aa9.36□□□□□ -0.91
LINC00440-201ENST00000446579 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.36□□□□□ -0.91
LINC00440-201ENST00000446579 MAGEB6P1A0A0J9YX57 407 aa9.35□□□□□ -0.91
LINC00440-201ENST00000446579 NR3C2P08235 984 aa9.35□□□□□ -0.91
LINC00440-201ENST00000446579 NBPF14Q5TI25 921 aa9.35□□□□□ -0.91
LINC00440-201ENST00000446579 PCMTD1Q96MG8 357 aaPredicted RBP9.35□□□□□ -0.91
LINC00440-201ENST00000446579 KLF16Q9BXK1 252 aaPredicted RBP9.35□□□□□ -0.91
LINC00440-201ENST00000446579 H3BM21 787 aa9.34□□□□□ -0.91
LINC00440-201ENST00000446579 UPP2O95045 317 aa9.34□□□□□ -0.91
LINC00440-201ENST00000446579 MAN1A2O60476 641 aa9.33□□□□□ -0.92
LINC00440-201ENST00000446579 BMP2P12643 396 aa9.33□□□□□ -0.92
LINC00440-201ENST00000446579 FSHRP23945 695 aa9.33□□□□□ -0.92
LINC00440-201ENST00000446579 GRM5P41594 1212 aa9.33□□□□□ -0.92
LINC00440-201ENST00000446579 PPP2R2DQ66LE6 453 aa9.33□□□□□ -0.92
LINC00440-201ENST00000446579 VASH1Q7L8A9 365 aaPredicted RBP9.33□□□□□ -0.92
LINC00440-201ENST00000446579 CARD14Q9BXL6 1004 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms