RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 RALGAPBQ86X10 1494 aa16.19■□□□□ 0.18
CDCA3-203ENST00000446553 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
CDCA3-203ENST00000446553 GLI3P10071 1580 aa16.18■□□□□ 0.18
CDCA3-203ENST00000446553 FAM83GA6ND36 823 aa16.18■□□□□ 0.18
CDCA3-203ENST00000446553 NBPF8Q3BBV2 869 aa16.18■□□□□ 0.18
CDCA3-203ENST00000446553 COL14A1Q05707 1796 aaKnown RBP16.18■□□□□ 0.18
CDCA3-203ENST00000446553 ACEP12821 1306 aa16.18■□□□□ 0.18
CDCA3-203ENST00000446553 EP400Q96L91 3159 aa16.17■□□□□ 0.18
CDCA3-203ENST00000446553 ONECUT3O60422 494 aaPredicted RBP16.17■□□□□ 0.18
CDCA3-203ENST00000446553 TRIM26Q12899 539 aaPredicted RBP16.17■□□□□ 0.18
CDCA3-203ENST00000446553 NEUROD1Q13562 356 aa16.17■□□□□ 0.18
CDCA3-203ENST00000446553 ROCK2O75116 1388 aaKnown RBP16.16■□□□□ 0.18
CDCA3-203ENST00000446553 PAK3O75914 559 aaPredicted RBP16.16■□□□□ 0.18
CDCA3-203ENST00000446553 SRPK2P78362 688 aaKnown RBP16.15■□□□□ 0.18
CDCA3-203ENST00000446553 CCDC125Q86Z20 511 aa16.15■□□□□ 0.18
CDCA3-203ENST00000446553 SBNO2Q9Y2G9 1366 aa16.14■□□□□ 0.17
CDCA3-203ENST00000446553 NRAPQ86VF7 1730 aa16.14■□□□□ 0.17
CDCA3-203ENST00000446553 PPIP5K1Q6PFW1 1433 aa16.14■□□□□ 0.17
CDCA3-203ENST00000446553 EVC2Q86UK5 1308 aa16.14■□□□□ 0.17
CDCA3-203ENST00000446553 PHRF1Q9P1Y6 1649 aaKnown RBP16.12■□□□□ 0.17
CDCA3-203ENST00000446553 CABP2Q9NPB3 220 aa16.12■□□□□ 0.17
CDCA3-203ENST00000446553 BTG4Q9NY30 223 aa16.12■□□□□ 0.17
CDCA3-203ENST00000446553 USP19O94966 1318 aa16.11■□□□□ 0.17
CDCA3-203ENST00000446553 PRDM11Q9NQV5 511 aa16.1■□□□□ 0.17
CDCA3-203ENST00000446553 CPDO75976 1380 aa16.1■□□□□ 0.17
CDCA3-203ENST00000446553 TONSLQ96HA7 1378 aa16.1■□□□□ 0.17
CDCA3-203ENST00000446553 PLEKHG5O94827 1062 aa16.09■□□□□ 0.17
CDCA3-203ENST00000446553 NLRP13Q86W25 1043 aa16.09■□□□□ 0.17
CDCA3-203ENST00000446553 SEPT12Q8IYM1 358 aa16.09■□□□□ 0.17
CDCA3-203ENST00000446553 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
CDCA3-203ENST00000446553 BRWD3Q6RI45 1802 aa16.09■□□□□ 0.17
CDCA3-203ENST00000446553 KIAA0232Q92628 1395 aa16.09■□□□□ 0.17
CDCA3-203ENST00000446553 USP6P35125 1406 aa16.09■□□□□ 0.17
CDCA3-203ENST00000446553 ZNF692Q9BU19 519 aaPredicted RBP16.08■□□□□ 0.16
CDCA3-203ENST00000446553 CABP1Q9NZU7 370 aa16.08■□□□□ 0.16
CDCA3-203ENST00000446553 SPATA31A5Q5VU36 1347 aa16.08■□□□□ 0.16
CDCA3-203ENST00000446553 SPATA31A7Q8IWB4 1347 aa16.08■□□□□ 0.16
CDCA3-203ENST00000446553 SSH2Q76I76 1423 aa16.08■□□□□ 0.16
CDCA3-203ENST00000446553 CCDC9Q9Y3X0 531 aaKnown RBP16.07■□□□□ 0.16
CDCA3-203ENST00000446553 NRKQ7Z2Y5 1582 aa16.07■□□□□ 0.16
CDCA3-203ENST00000446553 CARD11Q9BXL7 1154 aa16.06■□□□□ 0.16
CDCA3-203ENST00000446553 BLMP54132 1417 aaPredicted RBP16.05■□□□□ 0.16
CDCA3-203ENST00000446553 GCP02774 474 aa16.04■□□□□ 0.16
CDCA3-203ENST00000446553 KRT27Q7Z3Y8 459 aa16.04■□□□□ 0.16
CDCA3-203ENST00000446553 PUS7Q96PZ0 661 aaKnown RBP16.04■□□□□ 0.16
CDCA3-203ENST00000446553 CPSF1Q10570 1443 aaKnown RBP16.03■□□□□ 0.16
CDCA3-203ENST00000446553 AKAP12Q02952 1782 aa16.03■□□□□ 0.16
CDCA3-203ENST00000446553 SPATA31A1Q5TZJ5 1347 aa16.03■□□□□ 0.16
CDCA3-203ENST00000446553 LMO7Q8WWI1 1683 aa16.03■□□□□ 0.16
CDCA3-203ENST00000446553 THSD7AQ9UPZ6 1657 aa16.03■□□□□ 0.16
CDCA3-203ENST00000446553 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
CDCA3-203ENST00000446553 ZC3H6P61129 1189 aaKnown RBP16.03■□□□□ 0.16
CDCA3-203ENST00000446553 NUTM2GQ5VZR2 741 aa16.03■□□□□ 0.16
CDCA3-203ENST00000446553 SLIT3O75094 1523 aa16.03■□□□□ 0.16
CDCA3-203ENST00000446553 TTC21AQ8NDW8 1320 aa16.02■□□□□ 0.16
CDCA3-203ENST00000446553 FAM98CQ17RN3 349 aaKnown RBP16.02■□□□□ 0.16
CDCA3-203ENST00000446553 NLRP6P59044 892 aa16.01■□□□□ 0.15
CDCA3-203ENST00000446553 CHRNA2Q15822 529 aa16.01■□□□□ 0.15
CDCA3-203ENST00000446553 CAMTA1Q9Y6Y1 1673 aa16.01■□□□□ 0.15
CDCA3-203ENST00000446553 PIK3C2AO00443 1686 aa16■□□□□ 0.15
CDCA3-203ENST00000446553 BARGINQ6ZT62 677 aa16■□□□□ 0.15
CDCA3-203ENST00000446553 AATKQ6ZMQ8 1374 aa16■□□□□ 0.15
CDCA3-203ENST00000446553 TTC21BQ7Z4L5 1316 aa15.99■□□□□ 0.15
CDCA3-203ENST00000446553 CLSPNQ9HAW4 1339 aa15.98■□□□□ 0.15
CDCA3-203ENST00000446553 TIMELESSQ9UNS1 1208 aa15.98■□□□□ 0.15
CDCA3-203ENST00000446553 THRAP3Q9Y2W1 955 aaKnown RBP15.98■□□□□ 0.15
CDCA3-203ENST00000446553 MON2Q7Z3U7 1717 aa15.97■□□□□ 0.15
CDCA3-203ENST00000446553 A0A0G2JS52 829 aa15.97■□□□□ 0.15
CDCA3-203ENST00000446553 EVA1CP58658 441 aa15.97■□□□□ 0.15
CDCA3-203ENST00000446553 MYT1Q01538 1121 aa15.97■□□□□ 0.15
CDCA3-203ENST00000446553 SF3B2Q13435 895 aaKnown RBP15.97■□□□□ 0.15
CDCA3-203ENST00000446553 KCNH5Q8NCM2 988 aa15.97■□□□□ 0.15
CDCA3-203ENST00000446553 STRN4Q9NRL3 753 aa15.97■□□□□ 0.15
CDCA3-203ENST00000446553 KTN1Q86UP2 1357 aaKnown RBP15.97■□□□□ 0.15
CDCA3-203ENST00000446553 COL5A2P05997 1499 aaPredicted RBP15.97■□□□□ 0.15
CDCA3-203ENST00000446553 NINLQ9Y2I6 1382 aa15.96■□□□□ 0.15
CDCA3-203ENST00000446553 USP54Q70EL1 1684 aa15.95■□□□□ 0.14
CDCA3-203ENST00000446553 TCP11L2Q8N4U5 519 aa15.95■□□□□ 0.14
CDCA3-203ENST00000446553 TESK2Q96S53 571 aa15.95■□□□□ 0.14
CDCA3-203ENST00000446553 ZRANB1Q9UGI0 708 aa15.95■□□□□ 0.14
CDCA3-203ENST00000446553 USP31Q70CQ4 1352 aa15.95■□□□□ 0.14
CDCA3-203ENST00000446553 CD163L1Q9NR16 1453 aa15.95■□□□□ 0.14
CDCA3-203ENST00000446553 COL18A1P39060 1754 aa15.95■□□□□ 0.14
CDCA3-203ENST00000446553 ABCC6O95255 1503 aa15.94■□□□□ 0.14
CDCA3-203ENST00000446553 LARP1Q6PKG0 1096 aaKnown RBP15.94■□□□□ 0.14
CDCA3-203ENST00000446553 ARHGEF25Q86VW2 580 aa15.94■□□□□ 0.14
CDCA3-203ENST00000446553 CRB1P82279 1406 aa15.94■□□□□ 0.14
CDCA3-203ENST00000446553 RGPD1P0DJD0 1748 aa15.93■□□□□ 0.14
CDCA3-203ENST00000446553 DISP2A7MBM2 1401 aa15.93■□□□□ 0.14
CDCA3-203ENST00000446553 SRCAPQ6ZRS2 3230 aa15.92■□□□□ 0.14
CDCA3-203ENST00000446553 C11orf95C9JLR9 678 aaPredicted RBP15.92■□□□□ 0.14
CDCA3-203ENST00000446553 FAM196AQ6ZSG2 479 aa15.92■□□□□ 0.14
CDCA3-203ENST00000446553 HDGFL2Q7Z4V5 671 aaPredicted RBP15.92■□□□□ 0.14
CDCA3-203ENST00000446553 TERF2IPQ9NYB0 399 aa15.92■□□□□ 0.14
CDCA3-203ENST00000446553 NFAT5O94916 1531 aa15.92■□□□□ 0.14
CDCA3-203ENST00000446553 EDC4Q6P2E9 1401 aaKnown RBP15.92■□□□□ 0.14
CDCA3-203ENST00000446553 ST20-MTHFSA0A0A6YYL1 179 aa15.91■□□□□ 0.14
CDCA3-203ENST00000446553 BAG6P46379 1132 aa15.91■□□□□ 0.14
CDCA3-203ENST00000446553 PARP4Q9UKK3 1724 aaKnown RBP15.91■□□□□ 0.14
CDCA3-203ENST00000446553 DEFB132Q7Z7B7 95 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms