RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
VPS52-212ENST00000445902 TBC1D9Q6ZT07 1266 aa17.34■□□□□ 0.37
VPS52-212ENST00000445902 RBSNQ9H1K0 784 aa17.34■□□□□ 0.37
VPS52-212ENST00000445902 U2SURPO15042 1029 aaKnown RBP17.34■□□□□ 0.37
VPS52-212ENST00000445902 PRDM10Q9NQV6 1147 aa17.33■□□□□ 0.37
VPS52-212ENST00000445902 PODXL2Q9NZ53 605 aa17.33■□□□□ 0.37
VPS52-212ENST00000445902 TRAK1Q9UPV9 953 aa17.33■□□□□ 0.37
VPS52-212ENST00000445902 PKP1Q13835 747 aa17.33■□□□□ 0.36
VPS52-212ENST00000445902 ZSCAN23Q3MJ62 389 aa17.33■□□□□ 0.36
VPS52-212ENST00000445902 RBM27Q9P2N5 1060 aaKnown RBP17.32■□□□□ 0.36
VPS52-212ENST00000445902 CHAMP1Q96JM3 812 aa17.32■□□□□ 0.36
VPS52-212ENST00000445902 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.32■□□□□ 0.36
VPS52-212ENST00000445902 TRPM2O94759 1503 aa17.31■□□□□ 0.36
VPS52-212ENST00000445902 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
VPS52-212ENST00000445902 KANK1Q14678 1352 aa17.31■□□□□ 0.36
VPS52-212ENST00000445902 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
VPS52-212ENST00000445902 BMP2KLQ5H9B9 411 aa17.31■□□□□ 0.36
VPS52-212ENST00000445902 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.3■□□□□ 0.36
VPS52-212ENST00000445902 ERCC6Q03468 1493 aa17.3■□□□□ 0.36
VPS52-212ENST00000445902 UGGT1Q9NYU2 1555 aa17.3■□□□□ 0.36
VPS52-212ENST00000445902 PTPRTO14522 1441 aa17.3■□□□□ 0.36
VPS52-212ENST00000445902 ABCA6Q8N139 1617 aa17.3■□□□□ 0.36
VPS52-212ENST00000445902 NOL7Q9UMY1 257 aaKnown RBP17.29■□□□□ 0.36
VPS52-212ENST00000445902 PRPF40AO75400 957 aaKnown RBP17.27■□□□□ 0.36
VPS52-212ENST00000445902 PLEKHG5O94827 1062 aa17.27■□□□□ 0.36
VPS52-212ENST00000445902 ZNF445P59923 1031 aa17.27■□□□□ 0.36
VPS52-212ENST00000445902 FOXD4L5Q5VV16 416 aaPredicted RBP17.27■□□□□ 0.36
VPS52-212ENST00000445902 FOXD4L4Q8WXT5 416 aaPredicted RBP17.27■□□□□ 0.36
VPS52-212ENST00000445902 TRIM35Q9UPQ4 493 aa17.27■□□□□ 0.36
VPS52-212ENST00000445902 CFAP74Q9C0B2 1584 aa17.27■□□□□ 0.36
VPS52-212ENST00000445902 LMBRD1Q9NUN5 540 aa17.27■□□□□ 0.35
VPS52-212ENST00000445902 IBTKQ9P2D0 1353 aaPredicted RBP17.26■□□□□ 0.35
VPS52-212ENST00000445902 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
VPS52-212ENST00000445902 TMPOP42166 694 aaKnown RBP17.26■□□□□ 0.35
VPS52-212ENST00000445902 A0A0U1RQG5 324 aaPredicted RBP17.26■□□□□ 0.35
VPS52-212ENST00000445902 ZHX1Q9UKY1 873 aaPredicted RBP17.26■□□□□ 0.35
VPS52-212ENST00000445902 CD109Q6YHK3 1445 aa17.26■□□□□ 0.35
VPS52-212ENST00000445902 RNF214Q8ND24 703 aa17.25■□□□□ 0.35
VPS52-212ENST00000445902 JARID2Q92833 1246 aaPredicted RBP17.25■□□□□ 0.35
VPS52-212ENST00000445902 KIF16BQ96L93 1317 aa17.25■□□□□ 0.35
VPS52-212ENST00000445902 ZNF500O60304 480 aaPredicted RBP17.25■□□□□ 0.35
VPS52-212ENST00000445902 TERF1P54274 439 aa17.25■□□□□ 0.35
VPS52-212ENST00000445902 TMEM132EQ6IEE7 984 aa17.25■□□□□ 0.35
VPS52-212ENST00000445902 MPNDQ8N594 471 aa17.25■□□□□ 0.35
VPS52-212ENST00000445902 KIAA1210Q9ULL0 1709 aa17.24■□□□□ 0.35
VPS52-212ENST00000445902 CT47B1P0C2W7 299 aaPredicted RBP17.24■□□□□ 0.35
VPS52-212ENST00000445902 AFAP1Q8N556 730 aa17.24■□□□□ 0.35
VPS52-212ENST00000445902 MAP7D2Q96T17 732 aa17.24■□□□□ 0.35
VPS52-212ENST00000445902 ZKSCAN5Q9Y2L8 839 aa17.24■□□□□ 0.35
VPS52-212ENST00000445902 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
VPS52-212ENST00000445902 SYCE3A1L190 88 aa17.24■□□□□ 0.35
VPS52-212ENST00000445902 GPT2Q8TD30 523 aa17.24■□□□□ 0.35
VPS52-212ENST00000445902 STAC3Q96MF2 364 aa17.24■□□□□ 0.35
VPS52-212ENST00000445902 MAP3K4Q9Y6R4 1608 aa17.24■□□□□ 0.35
VPS52-212ENST00000445902 SLC24A1O60721 1099 aa17.23■□□□□ 0.35
VPS52-212ENST00000445902 CLEC17AQ6ZS10 378 aa17.23■□□□□ 0.35
VPS52-212ENST00000445902 ZGPATQ8N5A5 531 aaKnown RBP17.23■□□□□ 0.35
VPS52-212ENST00000445902 PDLIM2Q96JY6 352 aa17.23■□□□□ 0.35
VPS52-212ENST00000445902 PPIP5K1Q6PFW1 1433 aa17.23■□□□□ 0.35
VPS52-212ENST00000445902 IPO8O15397 1037 aaKnown RBP17.23■□□□□ 0.35
VPS52-212ENST00000445902 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
VPS52-212ENST00000445902 NOS1P29475 1434 aa17.23■□□□□ 0.35
VPS52-212ENST00000445902 NSFL1CQ9UNZ2 370 aaKnown RBP17.22■□□□□ 0.35
VPS52-212ENST00000445902 HS1BP3Q53T59 392 aa17.21■□□□□ 0.35
VPS52-212ENST00000445902 TSC1Q92574 1164 aa17.21■□□□□ 0.35
VPS52-212ENST00000445902 ADGRB2O60241 1585 aa17.21■□□□□ 0.35
VPS52-212ENST00000445902 CDC45O75419 566 aa17.21■□□□□ 0.35
VPS52-212ENST00000445902 SPAG9O60271 1321 aaKnown RBP17.21■□□□□ 0.34
VPS52-212ENST00000445902 TMEM63CQ9P1W3 806 aa17.2■□□□□ 0.34
VPS52-212ENST00000445902 ELL2O00472 640 aaPredicted RBP17.2■□□□□ 0.34
VPS52-212ENST00000445902 NUCB2P80303 420 aa17.2■□□□□ 0.34
VPS52-212ENST00000445902 PLEKHF1Q96S99 279 aa17.2■□□□□ 0.34
VPS52-212ENST00000445902 GSPT1P15170 499 aaKnown RBP17.19■□□□□ 0.34
VPS52-212ENST00000445902 ABCC11Q96J66 1382 aa17.19■□□□□ 0.34
VPS52-212ENST00000445902 DYNC1I1O14576 645 aa17.19■□□□□ 0.34
VPS52-212ENST00000445902 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
VPS52-212ENST00000445902 SIRT2Q8IXJ6 389 aa17.19■□□□□ 0.34
VPS52-212ENST00000445902 KIF3BO15066 747 aa17.19■□□□□ 0.34
VPS52-212ENST00000445902 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
VPS52-212ENST00000445902 ZBTB7BO15156 539 aaPredicted RBP17.18■□□□□ 0.34
VPS52-212ENST00000445902 PTMAP06454 111 aaKnown RBP17.18■□□□□ 0.34
VPS52-212ENST00000445902 DNTTIP2Q5QJE6 756 aaKnown RBP17.18■□□□□ 0.34
VPS52-212ENST00000445902 SASS6Q6UVJ0 657 aa17.18■□□□□ 0.34
VPS52-212ENST00000445902 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
VPS52-212ENST00000445902 QRICH2Q9H0J4 1663 aa17.18■□□□□ 0.34
VPS52-212ENST00000445902 CYP2E1P05181 493 aaPredicted RBP17.17■□□□□ 0.34
VPS52-212ENST00000445902 RABEP1Q15276 862 aa17.17■□□□□ 0.34
VPS52-212ENST00000445902 CSPP1Q1MSJ5 1256 aa17.17■□□□□ 0.34
VPS52-212ENST00000445902 CFAP65Q6ZU64 1925 aaKnown RBP17.17■□□□□ 0.34
VPS52-212ENST00000445902 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
VPS52-212ENST00000445902 C16orf71Q8IYS4 520 aaPredicted RBP17.16■□□□□ 0.34
VPS52-212ENST00000445902 SMAP1Q8IYB5 467 aaPredicted RBP17.16■□□□□ 0.34
VPS52-212ENST00000445902 CCDC39Q9UFE4 941 aa17.16■□□□□ 0.34
VPS52-212ENST00000445902 ZDHHC9Q9Y397 364 aa17.16■□□□□ 0.34
VPS52-212ENST00000445902 ATAD2Q6PL18 1390 aa17.16■□□□□ 0.34
VPS52-212ENST00000445902 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
VPS52-212ENST00000445902 APBB1O00213 710 aa17.16■□□□□ 0.34
VPS52-212ENST00000445902 LRSAM1Q6UWE0 723 aa17.16■□□□□ 0.34
VPS52-212ENST00000445902 THUMPD2Q9BTF0 503 aaKnown RBP17.16■□□□□ 0.34
VPS52-212ENST00000445902 CABP2Q9NPB3 220 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms