RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 DIAPH1O60610 1272 aaKnown RBP17.86■□□□□ 0.45
ERCC3-203ENST00000445889 HSP90AA1P07900 732 aaKnown RBP17.86■□□□□ 0.45
ERCC3-203ENST00000445889 VGFO15240 615 aaPredicted RBP17.85■□□□□ 0.45
ERCC3-203ENST00000445889 HSP90AB1P08238 724 aaKnown RBP17.85■□□□□ 0.45
ERCC3-203ENST00000445889 PRKAR2BP31323 418 aa17.85■□□□□ 0.45
ERCC3-203ENST00000445889 CHD1LQ86WJ1 897 aa17.85■□□□□ 0.45
ERCC3-203ENST00000445889 PHACTR3Q96KR7 559 aa17.85■□□□□ 0.45
ERCC3-203ENST00000445889 NAP1L5Q96NT1 182 aaPredicted RBP17.85■□□□□ 0.45
ERCC3-203ENST00000445889 CABP1Q9NZU7 370 aa17.85■□□□□ 0.45
ERCC3-203ENST00000445889 PPRC1Q5VV67 1664 aaKnown RBP17.85■□□□□ 0.45
ERCC3-203ENST00000445889 FSD2A1L4K1 749 aa17.85■□□□□ 0.45
ERCC3-203ENST00000445889 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
ERCC3-203ENST00000445889 TNPO1Q92973 898 aaKnown RBP17.85■□□□□ 0.45
ERCC3-203ENST00000445889 NRXN1Q9ULB1 1477 aa17.84■□□□□ 0.45
ERCC3-203ENST00000445889 EFCAB6Q5THR3 1501 aa17.84■□□□□ 0.45
ERCC3-203ENST00000445889 KIF1BO60333 1816 aa17.84■□□□□ 0.45
ERCC3-203ENST00000445889 NUCB1Q02818 461 aa17.84■□□□□ 0.45
ERCC3-203ENST00000445889 UBE2Q2Q8WVN8 375 aa17.83■□□□□ 0.45
ERCC3-203ENST00000445889 ADGRB1O14514 1584 aa17.83■□□□□ 0.44
ERCC3-203ENST00000445889 UHRF1BP1LA0JNW5 1464 aa17.83■□□□□ 0.44
ERCC3-203ENST00000445889 ATAD2Q6PL18 1390 aa17.83■□□□□ 0.44
ERCC3-203ENST00000445889 GAS2L3Q86XJ1 694 aa17.82■□□□□ 0.44
ERCC3-203ENST00000445889 INO80Q9ULG1 1556 aaPredicted RBP17.82■□□□□ 0.44
ERCC3-203ENST00000445889 IPO8O15397 1037 aaKnown RBP17.82■□□□□ 0.44
ERCC3-203ENST00000445889 ASXL2Q76L83 1435 aa17.81■□□□□ 0.44
ERCC3-203ENST00000445889 QRICH2Q9H0J4 1663 aa17.81■□□□□ 0.44
ERCC3-203ENST00000445889 PNNQ9H307 717 aaKnown RBP17.81■□□□□ 0.44
ERCC3-203ENST00000445889 TULP4Q9NRJ4 1543 aa17.81■□□□□ 0.44
ERCC3-203ENST00000445889 APBB1O00213 710 aa17.81■□□□□ 0.44
ERCC3-203ENST00000445889 GRPEL1Q9HAV7 217 aa17.8■□□□□ 0.44
ERCC3-203ENST00000445889 ZMYM3Q14202 1370 aa17.8■□□□□ 0.44
ERCC3-203ENST00000445889 DCTN1Q14203 1278 aa17.79■□□□□ 0.44
ERCC3-203ENST00000445889 KIF2CQ99661 725 aa17.79■□□□□ 0.44
ERCC3-203ENST00000445889 CT47B1P0C2W7 299 aaPredicted RBP17.79■□□□□ 0.44
ERCC3-203ENST00000445889 TERF2IPQ9NYB0 399 aa17.79■□□□□ 0.44
ERCC3-203ENST00000445889 ZRANB1Q9UGI0 708 aa17.79■□□□□ 0.44
ERCC3-203ENST00000445889 ADGRB3O60242 1522 aa17.79■□□□□ 0.44
ERCC3-203ENST00000445889 FAM83GA6ND36 823 aa17.78■□□□□ 0.44
ERCC3-203ENST00000445889 ZBTB7BO15156 539 aaPredicted RBP17.78■□□□□ 0.44
ERCC3-203ENST00000445889 WAPLQ7Z5K2 1190 aa17.78■□□□□ 0.44
ERCC3-203ENST00000445889 SIRT2Q8IXJ6 389 aa17.78■□□□□ 0.44
ERCC3-203ENST00000445889 CDK19Q9BWU1 502 aa17.78■□□□□ 0.44
ERCC3-203ENST00000445889 TBC1D9Q6ZT07 1266 aa17.78■□□□□ 0.44
ERCC3-203ENST00000445889 KIF16BQ96L93 1317 aa17.78■□□□□ 0.44
ERCC3-203ENST00000445889 MRE11P49959 708 aa17.78■□□□□ 0.44
ERCC3-203ENST00000445889 C16orf71Q8IYS4 520 aaPredicted RBP17.77■□□□□ 0.44
ERCC3-203ENST00000445889 EMILIN1Q9Y6C2 1016 aa17.77■□□□□ 0.44
ERCC3-203ENST00000445889 NPM1P06748 294 aaKnown RBP eCLIP17.77■□□□□ 0.43
ERCC3-203ENST00000445889 RBM25P49756 843 aaKnown RBP17.77■□□□□ 0.43
ERCC3-203ENST00000445889 FBXO31Q5XUX0 539 aaPredicted RBP17.77■□□□□ 0.43
ERCC3-203ENST00000445889 ABCC11Q96J66 1382 aa17.76■□□□□ 0.43
ERCC3-203ENST00000445889 SSFA2P28290 1259 aa17.76■□□□□ 0.43
ERCC3-203ENST00000445889 ERBB4Q15303 1308 aa17.76■□□□□ 0.43
ERCC3-203ENST00000445889 RPGRIP1LQ68CZ1 1315 aa17.76■□□□□ 0.43
ERCC3-203ENST00000445889 DDX11L8A8MPP1 907 aa17.76■□□□□ 0.43
ERCC3-203ENST00000445889 VAMP4O75379 141 aa17.76■□□□□ 0.43
ERCC3-203ENST00000445889 GAS2L2Q8NHY3 880 aa17.75■□□□□ 0.43
ERCC3-203ENST00000445889 POLKQ9UBT6 870 aa17.75■□□□□ 0.43
ERCC3-203ENST00000445889 MYO3AQ8NEV4 1616 aa17.75■□□□□ 0.43
ERCC3-203ENST00000445889 KIDINS220Q9ULH0 1771 aa17.74■□□□□ 0.43
ERCC3-203ENST00000445889 PPIP5K1Q6PFW1 1433 aa17.74■□□□□ 0.43
ERCC3-203ENST00000445889 DDIT3P35638 169 aa17.74■□□□□ 0.43
ERCC3-203ENST00000445889 HDGFL2Q7Z4V5 671 aaPredicted RBP17.74■□□□□ 0.43
ERCC3-203ENST00000445889 KRT24Q2M2I5 525 aa17.74■□□□□ 0.43
ERCC3-203ENST00000445889 C8orf58Q8NAV2 365 aa17.74■□□□□ 0.43
ERCC3-203ENST00000445889 NCKAP5LQ9HCH0 1330 aa17.73■□□□□ 0.43
ERCC3-203ENST00000445889 IFT172Q9UG01 1749 aa17.73■□□□□ 0.43
ERCC3-203ENST00000445889 NSD2O96028 1365 aa17.73■□□□□ 0.43
ERCC3-203ENST00000445889 SETBP1Q9Y6X0 1596 aa17.73■□□□□ 0.43
ERCC3-203ENST00000445889 CLCN1P35523 988 aa17.73■□□□□ 0.43
ERCC3-203ENST00000445889 BMP2KLQ5H9B9 411 aa17.73■□□□□ 0.43
ERCC3-203ENST00000445889 MRPL50Q8N5N7 158 aaKnown RBP17.73■□□□□ 0.43
ERCC3-203ENST00000445889 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
ERCC3-203ENST00000445889 ABCA9Q8IUA7 1624 aa17.73■□□□□ 0.43
ERCC3-203ENST00000445889 STAG3Q9UJ98 1225 aa17.72■□□□□ 0.43
ERCC3-203ENST00000445889 RRS1Q15050 365 aaKnown RBP17.72■□□□□ 0.43
ERCC3-203ENST00000445889 OTUD7AQ8TE49 926 aaPredicted RBP17.72■□□□□ 0.43
ERCC3-203ENST00000445889 GLI2P10070 1586 aa17.72■□□□□ 0.43
ERCC3-203ENST00000445889 ARAP3Q8WWN8 1544 aa17.72■□□□□ 0.43
ERCC3-203ENST00000445889 FCHSD2O94868 740 aa17.71■□□□□ 0.43
ERCC3-203ENST00000445889 CHAMP1Q96JM3 812 aa17.71■□□□□ 0.43
ERCC3-203ENST00000445889 IL16Q14005 1332 aa17.71■□□□□ 0.43
ERCC3-203ENST00000445889 NCLP19338 710 aaKnown RBP17.71■□□□□ 0.43
ERCC3-203ENST00000445889 RAB3GAP1Q15042 981 aa17.71■□□□□ 0.43
ERCC3-203ENST00000445889 ALDH1L2Q3SY69 923 aa17.71■□□□□ 0.43
ERCC3-203ENST00000445889 SNX21Q969T3 373 aa17.71■□□□□ 0.43
ERCC3-203ENST00000445889 TRIM44Q96DX7 344 aaPredicted RBP17.7■□□□□ 0.42
ERCC3-203ENST00000445889 K7ELQ4 463 aaPredicted RBP17.7■□□□□ 0.42
ERCC3-203ENST00000445889 GSPT1P15170 499 aaKnown RBP17.7■□□□□ 0.42
ERCC3-203ENST00000445889 TWISTNBQ3B726 338 aaPredicted RBP17.7■□□□□ 0.42
ERCC3-203ENST00000445889 NME9Q86XW9 330 aa17.7■□□□□ 0.42
ERCC3-203ENST00000445889 ESPNB1AK53 854 aa17.69■□□□□ 0.42
ERCC3-203ENST00000445889 GBP4Q96PP9 640 aa17.69■□□□□ 0.42
ERCC3-203ENST00000445889 NEURL4Q96JN8 1562 aa17.69■□□□□ 0.42
ERCC3-203ENST00000445889 SMARCA5O60264 1052 aaPredicted RBP17.69■□□□□ 0.42
ERCC3-203ENST00000445889 PKP1Q13835 747 aa17.69■□□□□ 0.42
ERCC3-203ENST00000445889 NFE2L2Q16236 605 aa17.68■□□□□ 0.42
ERCC3-203ENST00000445889 COL3A1P02461 1466 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-203ENST00000445889 ADGRB2O60241 1585 aa17.68■□□□□ 0.42
ERCC3-203ENST00000445889 PUS7Q96PZ0 661 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 215.3 ms