RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 GGNBP2Q9H3C7 697 aa23.76■■□□□ 1.39
SGCE-206ENST00000445866 TTC21AQ8NDW8 1320 aa23.76■■□□□ 1.39
SGCE-206ENST00000445866 BRD4O60885 1362 aaPredicted RBP23.76■■□□□ 1.39
SGCE-206ENST00000445866 NUTM2GQ5VZR2 741 aa23.76■■□□□ 1.39
SGCE-206ENST00000445866 NLRP6P59044 892 aa23.75■■□□□ 1.39
SGCE-206ENST00000445866 ZRANB1Q9UGI0 708 aa23.75■■□□□ 1.39
SGCE-206ENST00000445866 LRRC59Q96AG4 307 aaKnown RBP23.74■■□□□ 1.39
SGCE-206ENST00000445866 SSH2Q76I76 1423 aa23.74■■□□□ 1.39
SGCE-206ENST00000445866 COG3Q96JB2 828 aa23.72■■□□□ 1.39
SGCE-206ENST00000445866 SPATA31A3Q5VYP0 1347 aa23.72■■□□□ 1.39
SGCE-206ENST00000445866 SBNO1A3KN83 1393 aa23.72■■□□□ 1.39
SGCE-206ENST00000445866 PLEKHG5O94827 1062 aa23.71■■□□□ 1.39
SGCE-206ENST00000445866 MORC1Q86VD1 984 aa23.71■■□□□ 1.39
SGCE-206ENST00000445866 NLRP13Q86W25 1043 aa23.7■■□□□ 1.39
SGCE-206ENST00000445866 TOPAZ1Q8N9V7 1692 aa23.7■■□□□ 1.38
SGCE-206ENST00000445866 ANP32CO43423 234 aa23.69■■□□□ 1.38
SGCE-206ENST00000445866 MYOM1P52179 1685 aa23.68■■□□□ 1.38
SGCE-206ENST00000445866 RGPD8O14715 1765 aaPredicted RBP23.68■■□□□ 1.38
SGCE-206ENST00000445866 TNNT2P45379 298 aaPredicted RBP23.67■■□□□ 1.38
SGCE-206ENST00000445866 PXDNQ92626 1479 aa23.67■■□□□ 1.38
SGCE-206ENST00000445866 NPC1L1Q9UHC9 1359 aa23.67■■□□□ 1.38
SGCE-206ENST00000445866 HSPA1LP34931 641 aa23.67■■□□□ 1.38
SGCE-206ENST00000445866 ITSN1Q15811 1721 aa23.66■■□□□ 1.38
SGCE-206ENST00000445866 KIF1AQ12756 1690 aa23.65■■□□□ 1.38
SGCE-206ENST00000445866 NSD2O96028 1365 aa23.65■■□□□ 1.38
SGCE-206ENST00000445866 SOX12O15370 315 aa23.64■■□□□ 1.37
SGCE-206ENST00000445866 RALBP1Q15311 655 aa23.64■■□□□ 1.37
SGCE-206ENST00000445866 FBXO41Q8TF61 875 aa23.64■■□□□ 1.37
SGCE-206ENST00000445866 PRKRIP1Q9H875 184 aaPredicted RBP23.64■■□□□ 1.37
SGCE-206ENST00000445866 ROBO1Q9Y6N7 1651 aa23.63■■□□□ 1.37
SGCE-206ENST00000445866 ARHGEF10O15013 1369 aa23.63■■□□□ 1.37
SGCE-206ENST00000445866 CABLES1Q8TDN4 633 aa23.63■■□□□ 1.37
SGCE-206ENST00000445866 TNS3Q68CZ2 1445 aa23.63■■□□□ 1.37
SGCE-206ENST00000445866 USP31Q70CQ4 1352 aa23.62■■□□□ 1.37
SGCE-206ENST00000445866 FBLN1P23142 703 aa23.61■■□□□ 1.37
SGCE-206ENST00000445866 GCP02774 474 aa23.6■■□□□ 1.37
SGCE-206ENST00000445866 HAP1P54257 671 aaPredicted RBP23.59■■□□□ 1.37
SGCE-206ENST00000445866 KCNH5Q8NCM2 988 aa23.58■■□□□ 1.37
SGCE-206ENST00000445866 AHDC1Q5TGY3 1603 aaPredicted RBP23.57■■□□□ 1.36
SGCE-206ENST00000445866 USP19O94966 1318 aa23.55■■□□□ 1.36
SGCE-206ENST00000445866 MIER1Q8N108 512 aa23.54■■□□□ 1.36
SGCE-206ENST00000445866 PARD3Q8TEW0 1356 aa23.54■■□□□ 1.36
SGCE-206ENST00000445866 PPP2R1AP30153 589 aa23.54■■□□□ 1.36
SGCE-206ENST00000445866 ZC3H6P61129 1189 aaKnown RBP23.54■■□□□ 1.36
SGCE-206ENST00000445866 PNPLA6Q8IY17 1366 aa23.53■■□□□ 1.36
SGCE-206ENST00000445866 OVOS2A0A0J9YW53 1432 aa23.53■■□□□ 1.36
SGCE-206ENST00000445866 OVOS2Q6IE36 1432 aa23.53■■□□□ 1.36
SGCE-206ENST00000445866 ZBTB7CA1YPR0 619 aa23.53■■□□□ 1.36
SGCE-206ENST00000445866 PPM1GO15355 546 aaPredicted RBP23.53■■□□□ 1.36
SGCE-206ENST00000445866 RRS1Q15050 365 aaKnown RBP23.53■■□□□ 1.36
SGCE-206ENST00000445866 AKAP12Q02952 1782 aa23.53■■□□□ 1.36
SGCE-206ENST00000445866 NUTM2BA6NNL0 878 aaPredicted RBP23.52■■□□□ 1.36
SGCE-206ENST00000445866 NUTM2EB1AL46 878 aaPredicted RBP23.52■■□□□ 1.36
SGCE-206ENST00000445866 NUTM2AQ8IVF1 878 aaPredicted RBP23.52■■□□□ 1.36
SGCE-206ENST00000445866 POLKQ9UBT6 870 aa23.52■■□□□ 1.36
SGCE-206ENST00000445866 JCADQ9P266 1359 aa23.52■■□□□ 1.36
SGCE-206ENST00000445866 MON2Q7Z3U7 1717 aa23.52■■□□□ 1.36
SGCE-206ENST00000445866 MTHFSP49914 203 aa23.51■■□□□ 1.35
SGCE-206ENST00000445866 MYBBP1AQ9BQG0 1328 aaKnown RBP23.51■■□□□ 1.35
SGCE-206ENST00000445866 NHSL1Q5SYE7 1610 aa23.5■■□□□ 1.35
SGCE-206ENST00000445866 EMILIN1Q9Y6C2 1016 aa23.49■■□□□ 1.35
SGCE-206ENST00000445866 AATKQ6ZMQ8 1374 aa23.48■■□□□ 1.35
SGCE-206ENST00000445866 AMPHP49418 695 aa23.48■■□□□ 1.35
SGCE-206ENST00000445866 ARHGEF25Q86VW2 580 aa23.48■■□□□ 1.35
SGCE-206ENST00000445866 NRKQ7Z2Y5 1582 aa23.48■■□□□ 1.35
SGCE-206ENST00000445866 MAP3K19Q56UN5 1328 aa23.47■■□□□ 1.35
SGCE-206ENST00000445866 TRPM3Q9HCF6 1732 aaPredicted RBP23.47■■□□□ 1.35
SGCE-206ENST00000445866 ADAMTS2O95450 1211 aa23.46■■□□□ 1.35
SGCE-206ENST00000445866 PHLPP1O60346 1717 aa23.45■■□□□ 1.34
SGCE-206ENST00000445866 PRDM11Q9NQV5 511 aa23.44■■□□□ 1.34
SGCE-206ENST00000445866 PIK3C2AO00443 1686 aa23.44■■□□□ 1.34
SGCE-206ENST00000445866 COL16A1Q07092 1604 aaPredicted RBP23.44■■□□□ 1.34
SGCE-206ENST00000445866 CHRNA2Q15822 529 aa23.44■■□□□ 1.34
SGCE-206ENST00000445866 SPATA31A6Q5VVP1 1343 aa23.43■■□□□ 1.34
SGCE-206ENST00000445866 FAM83GA6ND36 823 aa23.42■■□□□ 1.34
SGCE-206ENST00000445866 IP6K1Q92551 441 aa23.42■■□□□ 1.34
SGCE-206ENST00000445866 CFAP53Q96M91 514 aa23.42■■□□□ 1.34
SGCE-206ENST00000445866 KIAA0232Q92628 1395 aa23.42■■□□□ 1.34
SGCE-206ENST00000445866 HSP90AB2PQ58FF8 381 aa23.41■■□□□ 1.34
SGCE-206ENST00000445866 MED1Q15648 1581 aaPredicted RBP23.4■■□□□ 1.34
SGCE-206ENST00000445866 ALS2Q96Q42 1657 aa23.4■■□□□ 1.34
SGCE-206ENST00000445866 HOXC9P31274 260 aa23.4■■□□□ 1.34
SGCE-206ENST00000445866 CCDC184Q52MB2 194 aa23.39■■□□□ 1.34
SGCE-206ENST00000445866 CPDO75976 1380 aa23.38■■□□□ 1.33
SGCE-206ENST00000445866 MRS2Q9HD23 443 aa23.38■■□□□ 1.33
SGCE-206ENST00000445866 AXIN2Q9Y2T1 843 aa23.38■■□□□ 1.33
SGCE-206ENST00000445866 SLIT3O75094 1523 aa23.38■■□□□ 1.33
SGCE-206ENST00000445866 CCER2I3L3R5 266 aa23.38■■□□□ 1.33
SGCE-206ENST00000445866 MEX3CQ5U5Q3 659 aaKnown RBP23.36■■□□□ 1.33
SGCE-206ENST00000445866 LTV1Q96GA3 475 aaPredicted RBP23.36■■□□□ 1.33
SGCE-206ENST00000445866 FLT4P35916 1363 aa23.35■■□□□ 1.33
SGCE-206ENST00000445866 DIAPH1O60610 1272 aaKnown RBP23.35■■□□□ 1.33
SGCE-206ENST00000445866 NGLY1Q96IV0 654 aa23.35■■□□□ 1.33
SGCE-206ENST00000445866 KIF24Q5T7B8 1368 aa23.34■■□□□ 1.33
SGCE-206ENST00000445866 C8orf37Q96NL8 207 aa23.34■■□□□ 1.33
SGCE-206ENST00000445866 NFAT5O94916 1531 aa23.34■■□□□ 1.33
SGCE-206ENST00000445866 EVA1CP58658 441 aa23.33■■□□□ 1.33
SGCE-206ENST00000445866 ILDR1Q86SU0 546 aaPredicted RBP23.32■■□□□ 1.32
SGCE-206ENST00000445866 BTG4Q9NY30 223 aa23.32■■□□□ 1.32
SGCE-206ENST00000445866 KIF20BQ96Q89 1820 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms